RNA–Protein interactions for RNA: ENST00000488268.5

ECHDC2-216, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-216ENST00000488268 MEX3CQ5U5Q3 659 aaKnown RBP16.56■□□□□ 0.24
ECHDC2-216ENST00000488268 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
ECHDC2-216ENST00000488268 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.54■□□□□ 0.24
ECHDC2-216ENST00000488268 DUOX2Q9NRD8 1548 aa16.54■□□□□ 0.24
ECHDC2-216ENST00000488268 MYO5BQ9ULV0 1848 aa16.52■□□□□ 0.23
ECHDC2-216ENST00000488268 IDI1Q13907 227 aa16.51■□□□□ 0.23
ECHDC2-216ENST00000488268 RGS12O14924 1447 aa16.51■□□□□ 0.23
ECHDC2-216ENST00000488268 NCOA3Q9Y6Q9 1424 aa16.51■□□□□ 0.23
ECHDC2-216ENST00000488268 ADGRB3O60242 1522 aa16.5■□□□□ 0.23
ECHDC2-216ENST00000488268 FAM50AQ14320 339 aaKnown RBP16.49■□□□□ 0.23
ECHDC2-216ENST00000488268 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
ECHDC2-216ENST00000488268 PTPN23Q9H3S7 1636 aa16.48■□□□□ 0.23
ECHDC2-216ENST00000488268 AFF2P51816 1311 aa16.48■□□□□ 0.23
ECHDC2-216ENST00000488268 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
ECHDC2-216ENST00000488268 SETBP1Q9Y6X0 1596 aa16.46■□□□□ 0.23
ECHDC2-216ENST00000488268 NOS1P29475 1434 aa16.45■□□□□ 0.22
ECHDC2-216ENST00000488268 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
ECHDC2-216ENST00000488268 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
ECHDC2-216ENST00000488268 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
ECHDC2-216ENST00000488268 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
ECHDC2-216ENST00000488268 EP400Q96L91 3159 aa16.44■□□□□ 0.22
ECHDC2-216ENST00000488268 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
ECHDC2-216ENST00000488268 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
ECHDC2-216ENST00000488268 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
ECHDC2-216ENST00000488268 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
ECHDC2-216ENST00000488268 ITGAEP38570 1179 aa16.42■□□□□ 0.22
ECHDC2-216ENST00000488268 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
ECHDC2-216ENST00000488268 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
ECHDC2-216ENST00000488268 SETD5Q9C0A6 1442 aa16.42■□□□□ 0.22
ECHDC2-216ENST00000488268 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
ECHDC2-216ENST00000488268 C19orf44Q9H6X5 657 aa16.41■□□□□ 0.22
ECHDC2-216ENST00000488268 QTRT2Q9H974 415 aaKnown RBP16.41■□□□□ 0.22
ECHDC2-216ENST00000488268 KIF15Q9NS87 1388 aa16.4■□□□□ 0.22
ECHDC2-216ENST00000488268 BRINP3Q76B58 766 aa16.4■□□□□ 0.22
ECHDC2-216ENST00000488268 TBX22Q9Y458 520 aa16.39■□□□□ 0.21
ECHDC2-216ENST00000488268 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
ECHDC2-216ENST00000488268 TMEM131LA2VDJ0 1609 aa16.38■□□□□ 0.21
ECHDC2-216ENST00000488268 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
ECHDC2-216ENST00000488268 BCANQ96GW7 911 aa16.38■□□□□ 0.21
ECHDC2-216ENST00000488268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.212e-9■□□□□ 8.4
ECHDC2-216ENST00000488268 ZRANB1Q9UGI0 708 aa16.38■□□□□ 0.21
ECHDC2-216ENST00000488268 ATAD2Q6PL18 1390 aa16.38■□□□□ 0.21
ECHDC2-216ENST00000488268 ATF3P18847 181 aa16.37■□□□□ 0.21
ECHDC2-216ENST00000488268 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
ECHDC2-216ENST00000488268 KANK1Q14678 1352 aa16.37■□□□□ 0.21
ECHDC2-216ENST00000488268 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
ECHDC2-216ENST00000488268 CHIC2Q9UKJ5 165 aa16.36■□□□□ 0.21
ECHDC2-216ENST00000488268 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
ECHDC2-216ENST00000488268 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
ECHDC2-216ENST00000488268 C8orf37Q96NL8 207 aa16.35■□□□□ 0.21
ECHDC2-216ENST00000488268 RRP7BPQ9NSQ0 103 aa16.34■□□□□ 0.21
ECHDC2-216ENST00000488268 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
ECHDC2-216ENST00000488268 DCCP43146 1447 aa16.34■□□□□ 0.21
ECHDC2-216ENST00000488268 DAPK1P53355 1430 aa16.34■□□□□ 0.21
ECHDC2-216ENST00000488268 FOXD1Q16676 465 aa16.33■□□□□ 0.2
ECHDC2-216ENST00000488268 PNPLA6Q8IY17 1366 aa16.33■□□□□ 0.2
ECHDC2-216ENST00000488268 ABCC5O15440 1437 aa16.33■□□□□ 0.2
ECHDC2-216ENST00000488268 LRRC59Q96AG4 307 aaKnown RBP16.32■□□□□ 0.2
ECHDC2-216ENST00000488268 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
ECHDC2-216ENST00000488268 MST1RQ04912 1400 aa16.31■□□□□ 0.2
ECHDC2-216ENST00000488268 LRP5O75197 1615 aa16.3■□□□□ 0.2
ECHDC2-216ENST00000488268 RPRD2Q5VT52 1461 aaKnown RBP16.3■□□□□ 0.2
ECHDC2-216ENST00000488268 PTPRUQ92729 1446 aa16.3■□□□□ 0.2
ECHDC2-216ENST00000488268 XRN1Q8IZH2 1706 aaKnown RBP16.3■□□□□ 0.2
ECHDC2-216ENST00000488268 LAMC1P11047 1609 aa16.3■□□□□ 0.2
ECHDC2-216ENST00000488268 HDGFP51858 240 aaKnown RBP16.29■□□□□ 0.2
ECHDC2-216ENST00000488268 TRPM2O94759 1503 aa16.29■□□□□ 0.2
ECHDC2-216ENST00000488268 PPP1R15AO75807 674 aaPredicted RBP16.28■□□□□ 0.2
ECHDC2-216ENST00000488268 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
ECHDC2-216ENST00000488268 CCDC125Q86Z20 511 aa16.27■□□□□ 0.2
ECHDC2-216ENST00000488268 UNC13BO14795 1591 aa16.26■□□□□ 0.19
ECHDC2-216ENST00000488268 ATRNO75882 1429 aa16.26■□□□□ 0.19
ECHDC2-216ENST00000488268 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
ECHDC2-216ENST00000488268 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
ECHDC2-216ENST00000488268 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
ECHDC2-216ENST00000488268 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
ECHDC2-216ENST00000488268 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
ECHDC2-216ENST00000488268 MARF1Q9Y4F3 1742 aaKnown RBP16.24■□□□□ 0.19
ECHDC2-216ENST00000488268 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
ECHDC2-216ENST00000488268 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
ECHDC2-216ENST00000488268 FNBP4Q8N3X1 1017 aaPredicted RBP16.23■□□□□ 0.19
ECHDC2-216ENST00000488268 USP21Q9UK80 565 aa16.23■□□□□ 0.19
ECHDC2-216ENST00000488268 TRPC5Q9UL62 973 aaPredicted RBP16.23■□□□□ 0.19
ECHDC2-216ENST00000488268 COL22A1Q8NFW1 1626 aaPredicted RBP16.22■□□□□ 0.19
ECHDC2-216ENST00000488268 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
ECHDC2-216ENST00000488268 BRWD3Q6RI45 1802 aa16.2■□□□□ 0.18
ECHDC2-216ENST00000488268 E9PCH4 1651 aa16.19■□□□□ 0.18
ECHDC2-216ENST00000488268 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
ECHDC2-216ENST00000488268 BCL9LQ86UU0 1499 aa16.17■□□□□ 0.18
ECHDC2-216ENST00000488268 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.17■□□□□ 0.18
ECHDC2-216ENST00000488268 BLMP54132 1417 aaPredicted RBP16.16■□□□□ 0.18
ECHDC2-216ENST00000488268 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
ECHDC2-216ENST00000488268 SOS2Q07890 1332 aaPredicted RBP16.16■□□□□ 0.18
ECHDC2-216ENST00000488268 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
ECHDC2-216ENST00000488268 C1orf167Q5SNV9 1468 aa16.15■□□□□ 0.18
ECHDC2-216ENST00000488268 IQGAP3Q86VI3 1631 aa16.14■□□□□ 0.17
ECHDC2-216ENST00000488268 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
ECHDC2-216ENST00000488268 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
ECHDC2-216ENST00000488268 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
ECHDC2-216ENST00000488268 MYOM2P54296 1465 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms