RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
CPA4-207ENST00000488025 AFF2P51816 1311 aa13.39□□□□□ -0.27
CPA4-207ENST00000488025 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
CPA4-207ENST00000488025 CROCC2H7BZ55 1655 aa13.37□□□□□ -0.27
CPA4-207ENST00000488025 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
CPA4-207ENST00000488025 BCANQ96GW7 911 aa13.37□□□□□ -0.27
CPA4-207ENST00000488025 TSPY4P0CV99 314 aa13.36□□□□□ -0.27
CPA4-207ENST00000488025 TSPY10P0CW01 314 aa13.36□□□□□ -0.27
CPA4-207ENST00000488025 EP400Q96L91 3159 aa13.36□□□□□ -0.27
CPA4-207ENST00000488025 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
CPA4-207ENST00000488025 ADGRB3O60242 1522 aa13.35□□□□□ -0.27
CPA4-207ENST00000488025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPA4-207ENST00000488025 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
CPA4-207ENST00000488025 ARHGAP31Q2M1Z3 1444 aa13.33□□□□□ -0.28
CPA4-207ENST00000488025 IDI1Q13907 227 aa13.33□□□□□ -0.28
CPA4-207ENST00000488025 RSPH4AQ5TD94 716 aa13.33□□□□□ -0.28
CPA4-207ENST00000488025 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
CPA4-207ENST00000488025 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
CPA4-207ENST00000488025 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
CPA4-207ENST00000488025 BRWD3Q6RI45 1802 aa13.3□□□□□ -0.28
CPA4-207ENST00000488025 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
CPA4-207ENST00000488025 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
CPA4-207ENST00000488025 ASXL1Q8IXJ9 1541 aa13.28□□□□□ -0.28
CPA4-207ENST00000488025 BRINP3Q76B58 766 aa13.27□□□□□ -0.29
CPA4-207ENST00000488025 DDX17Q92841 729 aaKnown RBP13.27□□□□□ -0.29
CPA4-207ENST00000488025 TMEM131LA2VDJ0 1609 aa13.27□□□□□ -0.29
CPA4-207ENST00000488025 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.29
CPA4-207ENST00000488025 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
CPA4-207ENST00000488025 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
CPA4-207ENST00000488025 ATF3P18847 181 aa13.25□□□□□ -0.29
CPA4-207ENST00000488025 KIF15Q9NS87 1388 aa13.24□□□□□ -0.29
CPA4-207ENST00000488025 RRP7BPQ9NSQ0 103 aa13.24□□□□□ -0.29
CPA4-207ENST00000488025 NALCNQ8IZF0 1738 aa13.24□□□□□ -0.29
CPA4-207ENST00000488025 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
CPA4-207ENST00000488025 PLEKHG1Q9ULL1 1385 aa13.23□□□□□ -0.29
CPA4-207ENST00000488025 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
CPA4-207ENST00000488025 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
CPA4-207ENST00000488025 LRP5O75197 1615 aa13.23□□□□□ -0.29
CPA4-207ENST00000488025 NOS1P29475 1434 aa13.22□□□□□ -0.29
CPA4-207ENST00000488025 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
CPA4-207ENST00000488025 PPP1R15AO75807 674 aaPredicted RBP13.22□□□□□ -0.29
CPA4-207ENST00000488025 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
CPA4-207ENST00000488025 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.29
CPA4-207ENST00000488025 NGLY1Q96IV0 654 aa13.21□□□□□ -0.29
CPA4-207ENST00000488025 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.29
CPA4-207ENST00000488025 LMTK2Q8IWU2 1503 aa13.21□□□□□ -0.29
CPA4-207ENST00000488025 KANK1Q14678 1352 aa13.2□□□□□ -0.3
CPA4-207ENST00000488025 XRN1Q8IZH2 1706 aaKnown RBP13.2□□□□□ -0.3
CPA4-207ENST00000488025 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
CPA4-207ENST00000488025 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
CPA4-207ENST00000488025 NCOA3Q9Y6Q9 1424 aa13.2□□□□□ -0.3
CPA4-207ENST00000488025 MST1RQ04912 1400 aa13.19□□□□□ -0.3
CPA4-207ENST00000488025 UNC13BO14795 1591 aa13.19□□□□□ -0.3
CPA4-207ENST00000488025 PTPN23Q9H3S7 1636 aa13.18□□□□□ -0.3
CPA4-207ENST00000488025 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
CPA4-207ENST00000488025 TRPM2O94759 1503 aa13.18□□□□□ -0.3
CPA4-207ENST00000488025 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
CPA4-207ENST00000488025 ADRA2BP18089 450 aa13.17□□□□□ -0.3
CPA4-207ENST00000488025 ABCC5O15440 1437 aa13.16□□□□□ -0.3
CPA4-207ENST00000488025 E9PCH4 1651 aa13.16□□□□□ -0.3
CPA4-207ENST00000488025 CHGAP10645 457 aaKnown RBP13.16□□□□□ -0.3
CPA4-207ENST00000488025 USP21Q9UK80 565 aa13.16□□□□□ -0.3
CPA4-207ENST00000488025 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
CPA4-207ENST00000488025 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
CPA4-207ENST00000488025 CHIC2Q9UKJ5 165 aa13.14□□□□□ -0.31
CPA4-207ENST00000488025 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
CPA4-207ENST00000488025 ATRNO75882 1429 aa13.13□□□□□ -0.31
CPA4-207ENST00000488025 KANK4Q5T7N3 995 aaPredicted RBP13.13□□□□□ -0.31
CPA4-207ENST00000488025 DEFB132Q7Z7B7 95 aa13.13□□□□□ -0.31
CPA4-207ENST00000488025 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
CPA4-207ENST00000488025 LAMC1P11047 1609 aa13.13□□□□□ -0.31
CPA4-207ENST00000488025 TRPC5Q9UL62 973 aaPredicted RBP13.12□□□□□ -0.31
CPA4-207ENST00000488025 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.12□□□□□ -0.31
CPA4-207ENST00000488025 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
CPA4-207ENST00000488025 DCCP43146 1447 aa13.12□□□□□ -0.31
CPA4-207ENST00000488025 DAPK1P53355 1430 aa13.12□□□□□ -0.31
CPA4-207ENST00000488025 GLI3P10071 1580 aa13.11□□□□□ -0.31
CPA4-207ENST00000488025 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
CPA4-207ENST00000488025 PIK3R4Q99570 1358 aa13.08□□□□□ -0.31
CPA4-207ENST00000488025 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
CPA4-207ENST00000488025 RPRD2Q5VT52 1461 aaKnown RBP13.07□□□□□ -0.32
CPA4-207ENST00000488025 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
CPA4-207ENST00000488025 BCL9LQ86UU0 1499 aa13.06□□□□□ -0.32
CPA4-207ENST00000488025 CCDC125Q86Z20 511 aa13.06□□□□□ -0.32
CPA4-207ENST00000488025 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
CPA4-207ENST00000488025 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPA4-207ENST00000488025 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
CPA4-207ENST00000488025 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
CPA4-207ENST00000488025 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
CPA4-207ENST00000488025 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
CPA4-207ENST00000488025 IQGAP3Q86VI3 1631 aa13.04□□□□□ -0.32
CPA4-207ENST00000488025 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
CPA4-207ENST00000488025 PLCH1Q4KWH8 1693 aa13.04□□□□□ -0.32
CPA4-207ENST00000488025 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
CPA4-207ENST00000488025 METP08581 1390 aa13.03□□□□□ -0.32
CPA4-207ENST00000488025 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.32
CPA4-207ENST00000488025 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.33
CPA4-207ENST00000488025 HRCP23327 699 aa13.01□□□□□ -0.33
CPA4-207ENST00000488025 GJD4Q96KN9 370 aaPredicted RBP13.01□□□□□ -0.33
CPA4-207ENST00000488025 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms