RNA–Protein interactions for RNA: ENST00000487846.1

TNIK-213, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 4

Gene TNIK, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-213ENST00000487846 PROCA1Q8NCQ7 364 aaPredicted RBP10.04□□□□□ -0.8
TNIK-213ENST00000487846 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
TNIK-213ENST00000487846 USP35Q9P2H5 1018 aa10.04□□□□□ -0.8
TNIK-213ENST00000487846 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
TNIK-213ENST00000487846 TTBK1Q5TCY1 1321 aaPredicted RBP10.04□□□□□ -0.8
TNIK-213ENST00000487846 PBXIP1Q96AQ6 731 aa10.03□□□□□ -0.8
TNIK-213ENST00000487846 PRM3Q9NNZ6 103 aa10.03□□□□□ -0.8
TNIK-213ENST00000487846 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
TNIK-213ENST00000487846 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
TNIK-213ENST00000487846 SSTR3P32745 418 aaPredicted RBP10.02□□□□□ -0.81
TNIK-213ENST00000487846 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
TNIK-213ENST00000487846 PTGDRQ13258 359 aa10.02□□□□□ -0.81
TNIK-213ENST00000487846 TMEM259Q4ZIN3 620 aa10.02□□□□□ -0.81
TNIK-213ENST00000487846 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.81
TNIK-213ENST00000487846 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
TNIK-213ENST00000487846 RSPH4AQ5TD94 716 aa10.01□□□□□ -0.81
TNIK-213ENST00000487846 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNIK-213ENST00000487846 SNRKQ9NRH2 765 aa10.01□□□□□ -0.81
TNIK-213ENST00000487846 POLR3EQ9NVU0 708 aa10.01□□□□□ -0.81
TNIK-213ENST00000487846 PTGER2P43116 358 aa10□□□□□ -0.81
TNIK-213ENST00000487846 GLMNQ92990 594 aa10□□□□□ -0.81
TNIK-213ENST00000487846 TBC1D12O60347 775 aa9.99□□□□□ -0.81
TNIK-213ENST00000487846 RFC5P40937 340 aa9.99□□□□□ -0.81
TNIK-213ENST00000487846 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
TNIK-213ENST00000487846 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
TNIK-213ENST00000487846 SOCS7O14512 581 aa9.97□□□□□ -0.81
TNIK-213ENST00000487846 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.81
TNIK-213ENST00000487846 GDPD2Q9HCC8 539 aa9.97□□□□□ -0.81
TNIK-213ENST00000487846 DIXDC1Q155Q3 683 aa9.96□□□□□ -0.82
TNIK-213ENST00000487846 MYSM1Q5VVJ2 828 aa9.96□□□□□ -0.82
TNIK-213ENST00000487846 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
TNIK-213ENST00000487846 IVNS1ABPQ9Y6Y0 642 aa9.95□□□□□ -0.82
TNIK-213ENST00000487846 NUDT7P0C024 238 aa9.94□□□□□ -0.82
TNIK-213ENST00000487846 DDX12PQ92771 950 aa9.93□□□□□ -0.82
TNIK-213ENST00000487846 ANO8Q9HCE9 1232 aaPredicted RBP9.93□□□□□ -0.82
TNIK-213ENST00000487846 FAM217BQ9NTX9 383 aaPredicted RBP9.93□□□□□ -0.82
TNIK-213ENST00000487846 ABL2P42684 1182 aa9.92□□□□□ -0.82
TNIK-213ENST00000487846 MTMR14Q8NCE2 650 aa9.92□□□□□ -0.82
TNIK-213ENST00000487846 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
TNIK-213ENST00000487846 POM121CA8CG34 1229 aa9.89□□□□□ -0.83
TNIK-213ENST00000487846 EVI5O60447 810 aa9.89□□□□□ -0.83
TNIK-213ENST00000487846 LHX6Q9UPM6 363 aa9.89□□□□□ -0.83
TNIK-213ENST00000487846 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.88□□□□□ -0.83
TNIK-213ENST00000487846 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
TNIK-213ENST00000487846 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
TNIK-213ENST00000487846 TBC1D2Q9BYX2 928 aa9.86□□□□□ -0.83
TNIK-213ENST00000487846 RFX1P22670 979 aa9.85□□□□□ -0.83
TNIK-213ENST00000487846 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
TNIK-213ENST00000487846 B4GALNT3Q6L9W6 998 aa9.85□□□□□ -0.83
TNIK-213ENST00000487846 PHOX2BQ99453 314 aa9.85□□□□□ -0.83
TNIK-213ENST00000487846 VRTNQ9H8Y1 702 aa9.85□□□□□ -0.83
TNIK-213ENST00000487846 PLA2G2EQ9NZK7 142 aa9.85□□□□□ -0.83
TNIK-213ENST00000487846 RBM47A0AV96 593 aaKnown RBP9.84□□□□□ -0.83
TNIK-213ENST00000487846 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
TNIK-213ENST00000487846 EIF5BO60841 1220 aaKnown RBP9.83□□□□□ -0.84
TNIK-213ENST00000487846 OATP04181 439 aa9.83□□□□□ -0.84
TNIK-213ENST00000487846 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
TNIK-213ENST00000487846 TUSC1Q2TAM9 212 aa9.83□□□□□ -0.84
TNIK-213ENST00000487846 HDGFL1Q5TGJ6 251 aa9.83□□□□□ -0.84
TNIK-213ENST00000487846 IGSF5Q9NSI5 407 aa9.83□□□□□ -0.84
TNIK-213ENST00000487846 TBC1D2BQ9UPU7 963 aa9.83□□□□□ -0.84
TNIK-213ENST00000487846 GNEQ9Y223 722 aaKnown RBP9.82□□□□□ -0.84
TNIK-213ENST00000487846 UNCXA6NJT0 531 aa9.81□□□□□ -0.84
TNIK-213ENST00000487846 PBX2P40425 430 aa9.81□□□□□ -0.84
TNIK-213ENST00000487846 FOSBP53539 338 aa9.81□□□□□ -0.84
TNIK-213ENST00000487846 WASHC4Q2M389 1173 aa9.81□□□□□ -0.84
TNIK-213ENST00000487846 POTEEQ6S8J3 1075 aa9.81□□□□□ -0.84
TNIK-213ENST00000487846 ERCC3P19447 782 aa9.8□□□□□ -0.84
TNIK-213ENST00000487846 FAM177A1Q8N128 213 aaPredicted RBP9.8□□□□□ -0.84
TNIK-213ENST00000487846 PPP1R12CQ9BZL4 782 aa9.8□□□□□ -0.84
TNIK-213ENST00000487846 METTL3Q86U44 580 aaKnown RBP9.79□□□□□ -0.84
TNIK-213ENST00000487846 JPH4Q96JJ6 628 aa9.79□□□□□ -0.84
TNIK-213ENST00000487846 NPDC1Q9NQX5 325 aaPredicted RBP9.79□□□□□ -0.84
TNIK-213ENST00000487846 LIMD1Q9UGP4 676 aa9.79□□□□□ -0.84
TNIK-213ENST00000487846 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
TNIK-213ENST00000487846 RIC3Q7Z5B4 369 aa9.78□□□□□ -0.84
TNIK-213ENST00000487846 PCDHGA10Q9Y5H3 936 aa9.78□□□□□ -0.84
TNIK-213ENST00000487846 NDUFB9Q9Y6M9 179 aa9.78□□□□□ -0.84
TNIK-213ENST00000487846 CANXP27824 592 aaKnown RBP9.77□□□□□ -0.85
TNIK-213ENST00000487846 EN1Q05925 392 aaPredicted RBP9.77□□□□□ -0.85
TNIK-213ENST00000487846 FBXO31Q5XUX0 539 aaPredicted RBP9.77□□□□□ -0.85
TNIK-213ENST00000487846 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
TNIK-213ENST00000487846 ATG7O95352 703 aa9.76□□□□□ -0.85
TNIK-213ENST00000487846 EPAS1Q99814 870 aa9.76□□□□□ -0.85
TNIK-213ENST00000487846 CARNS1A5YM72 827 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 TMEM88BA6NKF7 163 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 MAP3K7O43318 606 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 PHF14O94880 888 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 ZNF454Q8N9F8 522 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 ADAMTS19Q8TE59 1207 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 AXIN2Q9Y2T1 843 aa9.75□□□□□ -0.85
TNIK-213ENST00000487846 AP1G2O75843 785 aa9.74□□□□□ -0.85
TNIK-213ENST00000487846 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
TNIK-213ENST00000487846 PALM3A6NDB9 673 aaPredicted RBP9.73□□□□□ -0.85
TNIK-213ENST00000487846 SPTLC1O15269 473 aa9.73□□□□□ -0.85
TNIK-213ENST00000487846 LMOD1P29536 600 aaPredicted RBP9.73□□□□□ -0.85
TNIK-213ENST00000487846 CCER1Q8TC90 406 aaPredicted RBP9.73□□□□□ -0.85
TNIK-213ENST00000487846 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
TNIK-213ENST00000487846 PXYLP1Q8TE99 480 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms