RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 EFCAB6Q5THR3 1501 aa9.72□□□□□ -0.85
COL4A3-206ENST00000487633 RBM6P78332 1123 aaKnown RBP9.71□□□□□ -0.86
COL4A3-206ENST00000487633 IDI1Q13907 227 aa9.71□□□□□ -0.86
COL4A3-206ENST00000487633 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.86
COL4A3-206ENST00000487633 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.86
COL4A3-206ENST00000487633 BRINP3Q76B58 766 aa9.7□□□□□ -0.86
COL4A3-206ENST00000487633 LRP5O75197 1615 aa9.7□□□□□ -0.86
COL4A3-206ENST00000487633 ARHGEF5Q12774 1597 aa9.69□□□□□ -0.86
COL4A3-206ENST00000487633 MTUS2Q5JR59 1369 aa9.69□□□□□ -0.86
COL4A3-206ENST00000487633 BRWD3Q6RI45 1802 aa9.68□□□□□ -0.86
COL4A3-206ENST00000487633 ASXL1Q8IXJ9 1541 aa9.67□□□□□ -0.86
COL4A3-206ENST00000487633 EHBP1L1Q8N3D4 1523 aa9.67□□□□□ -0.86
COL4A3-206ENST00000487633 ARHGAP31Q2M1Z3 1444 aa9.67□□□□□ -0.86
COL4A3-206ENST00000487633 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
COL4A3-206ENST00000487633 DEFB132Q7Z7B7 95 aa9.67□□□□□ -0.86
COL4A3-206ENST00000487633 CEP162Q5TB80 1403 aa9.66□□□□□ -0.86
COL4A3-206ENST00000487633 SETD5Q9C0A6 1442 aa9.66□□□□□ -0.86
COL4A3-206ENST00000487633 PNPLA6Q8IY17 1366 aa9.66□□□□□ -0.86
COL4A3-206ENST00000487633 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
COL4A3-206ENST00000487633 ADGRB3O60242 1522 aa9.66□□□□□ -0.86
COL4A3-206ENST00000487633 ZFYVE9O95405 1425 aa9.65□□□□□ -0.86
COL4A3-206ENST00000487633 GCC2Q8IWJ2 1684 aa9.65□□□□□ -0.86
COL4A3-206ENST00000487633 ADAMTS13Q76LX8 1427 aa9.65□□□□□ -0.87
COL4A3-206ENST00000487633 PTPRUQ92729 1446 aa9.65□□□□□ -0.87
COL4A3-206ENST00000487633 BCANQ96GW7 911 aa9.64□□□□□ -0.87
COL4A3-206ENST00000487633 STAG3Q9UJ98 1225 aa9.64□□□□□ -0.87
COL4A3-206ENST00000487633 PSDA5PKW4 1024 aaPredicted RBP9.63□□□□□ -0.87
COL4A3-206ENST00000487633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL4A3-206ENST00000487633 ATRNO75882 1429 aa9.63□□□□□ -0.87
COL4A3-206ENST00000487633 MST1RQ04912 1400 aa9.63□□□□□ -0.87
COL4A3-206ENST00000487633 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
COL4A3-206ENST00000487633 NGLY1Q96IV0 654 aa9.62□□□□□ -0.87
COL4A3-206ENST00000487633 NOS1P29475 1434 aa9.62□□□□□ -0.87
COL4A3-206ENST00000487633 BCL9LQ86UU0 1499 aa9.61□□□□□ -0.87
COL4A3-206ENST00000487633 TSPY4P0CV99 314 aa9.61□□□□□ -0.87
COL4A3-206ENST00000487633 TSPY10P0CW01 314 aa9.61□□□□□ -0.87
COL4A3-206ENST00000487633 C19orf44Q9H6X5 657 aa9.61□□□□□ -0.87
COL4A3-206ENST00000487633 USP21Q9UK80 565 aa9.61□□□□□ -0.87
COL4A3-206ENST00000487633 PLEKHG1Q9ULL1 1385 aa9.61□□□□□ -0.87
COL4A3-206ENST00000487633 ATF3P18847 181 aa9.6□□□□□ -0.87
COL4A3-206ENST00000487633 CADPS2Q86UW7 1296 aa9.6□□□□□ -0.87
COL4A3-206ENST00000487633 DUOX2Q9NRD8 1548 aa9.6□□□□□ -0.87
COL4A3-206ENST00000487633 TMEM131LA2VDJ0 1609 aa9.6□□□□□ -0.87
COL4A3-206ENST00000487633 GLI3P10071 1580 aa9.59□□□□□ -0.87
COL4A3-206ENST00000487633 RIMS2Q9UQ26 1411 aa9.59□□□□□ -0.87
COL4A3-206ENST00000487633 NCOA3Q9Y6Q9 1424 aa9.59□□□□□ -0.87
COL4A3-206ENST00000487633 RSPH4AQ5TD94 716 aa9.59□□□□□ -0.87
COL4A3-206ENST00000487633 NALCNQ8IZF0 1738 aa9.59□□□□□ -0.87
COL4A3-206ENST00000487633 HRCP23327 699 aa9.58□□□□□ -0.88
COL4A3-206ENST00000487633 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
COL4A3-206ENST00000487633 TRPM2O94759 1503 aa9.57□□□□□ -0.88
COL4A3-206ENST00000487633 NRXN3Q9Y4C0 1643 aa9.57□□□□□ -0.88
COL4A3-206ENST00000487633 XRN1Q8IZH2 1706 aaKnown RBP9.57□□□□□ -0.88
COL4A3-206ENST00000487633 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
COL4A3-206ENST00000487633 LRRC59Q96AG4 307 aaKnown RBP9.57□□□□□ -0.88
COL4A3-206ENST00000487633 RRP7BPQ9NSQ0 103 aa9.57□□□□□ -0.88
COL4A3-206ENST00000487633 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
COL4A3-206ENST00000487633 TBX22Q9Y458 520 aa9.57□□□□□ -0.88
COL4A3-206ENST00000487633 CROCC2H7BZ55 1655 aa9.57□□□□□ -0.88
COL4A3-206ENST00000487633 LMTK2Q8IWU2 1503 aa9.56□□□□□ -0.88
COL4A3-206ENST00000487633 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
COL4A3-206ENST00000487633 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
COL4A3-206ENST00000487633 KIF15Q9NS87 1388 aa9.55□□□□□ -0.88
COL4A3-206ENST00000487633 LAMC1P11047 1609 aa9.55□□□□□ -0.88
COL4A3-206ENST00000487633 UNC13BO14795 1591 aa9.54□□□□□ -0.88
COL4A3-206ENST00000487633 COL22A1Q8NFW1 1626 aaPredicted RBP9.54□□□□□ -0.88
COL4A3-206ENST00000487633 YY1P25490 414 aa9.53□□□□□ -0.88
COL4A3-206ENST00000487633 CCDC125Q86Z20 511 aa9.53□□□□□ -0.88
COL4A3-206ENST00000487633 ORAI2Q96SN7 254 aa9.53□□□□□ -0.88
COL4A3-206ENST00000487633 ERBINQ96RT1 1412 aa9.53□□□□□ -0.88
COL4A3-206ENST00000487633 CAMTA1Q9Y6Y1 1673 aa9.52□□□□□ -0.89
COL4A3-206ENST00000487633 ABCC5O15440 1437 aa9.52□□□□□ -0.89
COL4A3-206ENST00000487633 PPP1R15AO75807 674 aaPredicted RBP9.52□□□□□ -0.89
COL4A3-206ENST00000487633 DCCP43146 1447 aa9.52□□□□□ -0.89
COL4A3-206ENST00000487633 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
COL4A3-206ENST00000487633 RALGAPBQ86X10 1494 aa9.52□□□□□ -0.89
COL4A3-206ENST00000487633 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.51□□□□□ -0.89
COL4A3-206ENST00000487633 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
COL4A3-206ENST00000487633 MYOM2P54296 1465 aa9.51□□□□□ -0.89
COL4A3-206ENST00000487633 SOS2Q07890 1332 aaPredicted RBP9.51□□□□□ -0.89
COL4A3-206ENST00000487633 PTCH1Q13635 1447 aa9.5□□□□□ -0.89
COL4A3-206ENST00000487633 FOXD1Q16676 465 aa9.5□□□□□ -0.89
COL4A3-206ENST00000487633 KANK4Q5T7N3 995 aaPredicted RBP9.5□□□□□ -0.89
COL4A3-206ENST00000487633 C1orf167Q5SNV9 1468 aa9.5□□□□□ -0.89
COL4A3-206ENST00000487633 SPHKAPQ2M3C7 1700 aa9.5□□□□□ -0.89
COL4A3-206ENST00000487633 UTRNP46939 3433 aa9.5□□□□□ -0.89
COL4A3-206ENST00000487633 METP08581 1390 aa9.5□□□□□ -0.89
COL4A3-206ENST00000487633 R3HDM1Q15032 1099 aaKnown RBP9.49□□□□□ -0.89
COL4A3-206ENST00000487633 SLC52A1Q9NWF4 448 aa9.49□□□□□ -0.89
COL4A3-206ENST00000487633 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
COL4A3-206ENST00000487633 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
COL4A3-206ENST00000487633 CHIC2Q9UKJ5 165 aa9.48□□□□□ -0.89
COL4A3-206ENST00000487633 E9PCH4 1651 aa9.48□□□□□ -0.89
COL4A3-206ENST00000487633 PIK3R4Q99570 1358 aa9.48□□□□□ -0.89
COL4A3-206ENST00000487633 XPCQ01831 940 aaPredicted RBP9.47□□□□□ -0.89
COL4A3-206ENST00000487633 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
COL4A3-206ENST00000487633 FAM182BQ5T319 152 aa9.47□□□□□ -0.89
COL4A3-206ENST00000487633 SLIT2O94813 1529 aa9.46□□□□□ -0.89
COL4A3-206ENST00000487633 TNS1Q9HBL0 1735 aaKnown RBP9.46□□□□□ -0.89
COL4A3-206ENST00000487633 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms