RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
ZNF541-204ENST00000487275 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.6
ZNF541-204ENST00000487275 IFT172Q9UG01 1749 aa11.27□□□□□ -0.61
ZNF541-204ENST00000487275 NRXN1Q9ULB1 1477 aa11.26□□□□□ -0.61
ZNF541-204ENST00000487275 PPLO60437 1756 aa11.26□□□□□ -0.61
ZNF541-204ENST00000487275 NEXMIFQ5QGS0 1516 aa11.26□□□□□ -0.61
ZNF541-204ENST00000487275 C3P01024 1663 aa11.26□□□□□ -0.61
ZNF541-204ENST00000487275 A2ML1A8K2U0 1454 aa11.25□□□□□ -0.61
ZNF541-204ENST00000487275 LAMC1P11047 1609 aa11.25□□□□□ -0.61
ZNF541-204ENST00000487275 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
ZNF541-204ENST00000487275 NUTM2DQ5VT03 806 aaPredicted RBP11.25□□□□□ -0.61
ZNF541-204ENST00000487275 PIK3C2GO75747 1445 aa11.25□□□□□ -0.61
ZNF541-204ENST00000487275 NLRP1Q9C000 1473 aa11.25□□□□□ -0.61
ZNF541-204ENST00000487275 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
ZNF541-204ENST00000487275 ZFYVE9O95405 1425 aa11.24□□□□□ -0.61
ZNF541-204ENST00000487275 ADAMTSL3P82987 1691 aa11.24□□□□□ -0.61
ZNF541-204ENST00000487275 KIAA1210Q9ULL0 1709 aa11.23□□□□□ -0.61
ZNF541-204ENST00000487275 HDGFP51858 240 aaKnown RBP11.23□□□□□ -0.61
ZNF541-204ENST00000487275 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.23□□□□□ -0.61
ZNF541-204ENST00000487275 RIMS2Q9UQ26 1411 aa11.23□□□□□ -0.61
ZNF541-204ENST00000487275 MYO5BQ9ULV0 1848 aa11.23□□□□□ -0.61
ZNF541-204ENST00000487275 ST20-MTHFSA0A0A6YYL1 179 aa11.22□□□□□ -0.61
ZNF541-204ENST00000487275 SCAF11Q99590 1463 aaKnown RBP11.22□□□□□ -0.61
ZNF541-204ENST00000487275 C14orf93Q9H972 538 aaKnown RBP11.22□□□□□ -0.61
ZNF541-204ENST00000487275 EIF3AQ14152 1382 aaKnown RBP11.21□□□□□ -0.61
ZNF541-204ENST00000487275 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
ZNF541-204ENST00000487275 KDM5AP29375 1690 aaKnown RBP11.2□□□□□ -0.62
ZNF541-204ENST00000487275 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
ZNF541-204ENST00000487275 CCDC7Q96M83 1385 aa11.19□□□□□ -0.62
ZNF541-204ENST00000487275 TMEM2Q9UHN6 1383 aa11.19□□□□□ -0.62
ZNF541-204ENST00000487275 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
ZNF541-204ENST00000487275 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
ZNF541-204ENST00000487275 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
ZNF541-204ENST00000487275 POLR3GLQ9BT43 218 aa11.18□□□□□ -0.62
ZNF541-204ENST00000487275 SENP3Q9H4L4 574 aaPredicted RBP11.18□□□□□ -0.62
ZNF541-204ENST00000487275 IQGAP1P46940 1657 aa11.17□□□□□ -0.62
ZNF541-204ENST00000487275 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
ZNF541-204ENST00000487275 KIF7Q2M1P5 1343 aa11.17□□□□□ -0.62
ZNF541-204ENST00000487275 TMEM132EQ6IEE7 984 aa11.17□□□□□ -0.62
ZNF541-204ENST00000487275 THEMISQ8N1K5 641 aaPredicted RBP11.17□□□□□ -0.62
ZNF541-204ENST00000487275 EID1Q9Y6B2 187 aa11.17□□□□□ -0.62
ZNF541-204ENST00000487275 TMF1P82094 1093 aa11.16□□□□□ -0.62
ZNF541-204ENST00000487275 BCANQ96GW7 911 aa11.16□□□□□ -0.62
ZNF541-204ENST00000487275 TRAK1Q9UPV9 953 aa11.16□□□□□ -0.62
ZNF541-204ENST00000487275 PTPRMP28827 1452 aa11.16□□□□□ -0.62
ZNF541-204ENST00000487275 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
ZNF541-204ENST00000487275 SLC24A1O60721 1099 aa11.15□□□□□ -0.62
ZNF541-204ENST00000487275 TXNDC2Q86VQ3 553 aa11.15□□□□□ -0.62
ZNF541-204ENST00000487275 TESK2Q96S53 571 aa11.15□□□□□ -0.62
ZNF541-204ENST00000487275 ALKQ9UM73 1620 aa11.15□□□□□ -0.62
ZNF541-204ENST00000487275 CEP170BQ9Y4F5 1589 aaPredicted RBP11.15□□□□□ -0.62
ZNF541-204ENST00000487275 SLIT1O75093 1534 aa11.14□□□□□ -0.63
ZNF541-204ENST00000487275 ARHGAP23Q9P227 1491 aa11.13□□□□□ -0.63
ZNF541-204ENST00000487275 CENPJQ9HC77 1338 aaPredicted RBP11.13□□□□□ -0.63
ZNF541-204ENST00000487275 POLR1AO95602 1720 aaPredicted RBP11.13□□□□□ -0.63
ZNF541-204ENST00000487275 PLEKHG1Q9ULL1 1385 aa11.13□□□□□ -0.63
ZNF541-204ENST00000487275 LTKP29376 864 aa11.12□□□□□ -0.63
ZNF541-204ENST00000487275 CDCA8Q53HL2 280 aa11.12□□□□□ -0.63
ZNF541-204ENST00000487275 STK26Q9P289 416 aa11.12□□□□□ -0.63
ZNF541-204ENST00000487275 ASXL1Q8IXJ9 1541 aa11.12□□□□□ -0.63
ZNF541-204ENST00000487275 YTHDC2Q9H6S0 1430 aaKnown RBP11.11□□□□□ -0.63
ZNF541-204ENST00000487275 MIER1Q8N108 512 aa11.11□□□□□ -0.63
ZNF541-204ENST00000487275 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
ZNF541-204ENST00000487275 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
ZNF541-204ENST00000487275 SETD1BQ9UPS6 1966 aaKnown RBP11.1□□□□□ -0.63
ZNF541-204ENST00000487275 ANP32CO43423 234 aa11.1□□□□□ -0.63
ZNF541-204ENST00000487275 LRPPRCP42704 1394 aaKnown RBP11.1□□□□□ -0.63
ZNF541-204ENST00000487275 NRXN3Q9Y4C0 1643 aa11.09□□□□□ -0.63
ZNF541-204ENST00000487275 SBNO2Q9Y2G9 1366 aa11.09□□□□□ -0.63
ZNF541-204ENST00000487275 ANKLE2Q86XL3 938 aa11.09□□□□□ -0.63
ZNF541-204ENST00000487275 POGKQ9P215 609 aa11.09□□□□□ -0.63
ZNF541-204ENST00000487275 ADAMTS13Q76LX8 1427 aa11.09□□□□□ -0.63
ZNF541-204ENST00000487275 METP08581 1390 aa11.08□□□□□ -0.64
ZNF541-204ENST00000487275 SETD1AO15047 1707 aaKnown RBP11.07□□□□□ -0.64
ZNF541-204ENST00000487275 ARHGEF28Q8N1W1 1705 aaKnown RBP11.07□□□□□ -0.64
ZNF541-204ENST00000487275 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
ZNF541-204ENST00000487275 PRAM1Q96QH2 718 aa11.07□□□□□ -0.64
ZNF541-204ENST00000487275 QRICH2Q9H0J4 1663 aa11.07□□□□□ -0.64
ZNF541-204ENST00000487275 DLC1Q96QB1 1528 aa11.06□□□□□ -0.64
ZNF541-204ENST00000487275 KDM4FA0A1W2PPD8 638 aa11.06□□□□□ -0.64
ZNF541-204ENST00000487275 SAFB2Q14151 953 aaKnown RBP eCLIP11.06□□□□□ -0.64
ZNF541-204ENST00000487275 SLC26A8Q96RN1 970 aa11.06□□□□□ -0.64
ZNF541-204ENST00000487275 TBX22Q9Y458 520 aa11.06□□□□□ -0.64
ZNF541-204ENST00000487275 DIP2AQ14689 1571 aa11.05□□□□□ -0.64
ZNF541-204ENST00000487275 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
ZNF541-204ENST00000487275 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
ZNF541-204ENST00000487275 MED14O60244 1454 aa11.04□□□□□ -0.64
ZNF541-204ENST00000487275 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
ZNF541-204ENST00000487275 TECPR2O15040 1411 aa11.02□□□□□ -0.64
ZNF541-204ENST00000487275 FAM135BQ49AJ0 1406 aa11.02□□□□□ -0.64
ZNF541-204ENST00000487275 KNDC1Q76NI1 1749 aa11.02□□□□□ -0.65
ZNF541-204ENST00000487275 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
ZNF541-204ENST00000487275 PUS7Q96PZ0 661 aaKnown RBP11.02□□□□□ -0.65
ZNF541-204ENST00000487275 PANK3Q9H999 370 aa11.02□□□□□ -0.65
ZNF541-204ENST00000487275 PLEKHH1Q9ULM0 1364 aa11.02□□□□□ -0.65
ZNF541-204ENST00000487275 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
ZNF541-204ENST00000487275 CPS1P31327 1500 aa11.01□□□□□ -0.65
ZNF541-204ENST00000487275 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
ZNF541-204ENST00000487275 AMOTL2Q9Y2J4 779 aa11.01□□□□□ -0.65
ZNF541-204ENST00000487275 PIK3R4Q99570 1358 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms