RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 DDX10Q13206 875 aaKnown RBP8.6□□□□□ -1.03
VAMP3-203ENST00000487194 ILDR2Q71H61 639 aa8.6□□□□□ -1.03
VAMP3-203ENST00000487194 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
VAMP3-203ENST00000487194 KDM4FA0A1W2PPD8 638 aa8.59□□□□□ -1.03
VAMP3-203ENST00000487194 VGFO15240 615 aaPredicted RBP8.59□□□□□ -1.03
VAMP3-203ENST00000487194 NBPF1Q3BBV0 1214 aa8.59□□□□□ -1.03
VAMP3-203ENST00000487194 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
VAMP3-203ENST00000487194 CCDC7Q96M83 1385 aa8.59□□□□□ -1.03
VAMP3-203ENST00000487194 PPLO60437 1756 aa8.58□□□□□ -1.04
VAMP3-203ENST00000487194 WASHC2AQ641Q2 1341 aa8.58□□□□□ -1.04
VAMP3-203ENST00000487194 ZFYVE9O95405 1425 aa8.58□□□□□ -1.04
VAMP3-203ENST00000487194 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
VAMP3-203ENST00000487194 EIF3AQ14152 1382 aaKnown RBP8.58□□□□□ -1.04
VAMP3-203ENST00000487194 ADGRF5Q8IZF2 1346 aa8.57□□□□□ -1.04
VAMP3-203ENST00000487194 ST20-MTHFSA0A0A6YYL1 179 aa8.57□□□□□ -1.04
VAMP3-203ENST00000487194 SLC24A1O60721 1099 aa8.57□□□□□ -1.04
VAMP3-203ENST00000487194 TMEM131LA2VDJ0 1609 aa8.57□□□□□ -1.04
VAMP3-203ENST00000487194 TNRQ92752 1358 aa8.57□□□□□ -1.04
VAMP3-203ENST00000487194 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-203ENST00000487194 SCAF11Q99590 1463 aaKnown RBP8.57□□□□□ -1.04
VAMP3-203ENST00000487194 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
VAMP3-203ENST00000487194 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
VAMP3-203ENST00000487194 MIER1Q8N108 512 aa8.56□□□□□ -1.04
VAMP3-203ENST00000487194 C14orf93Q9H972 538 aaKnown RBP8.56□□□□□ -1.04
VAMP3-203ENST00000487194 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
VAMP3-203ENST00000487194 HDGFP51858 240 aaKnown RBP8.55□□□□□ -1.04
VAMP3-203ENST00000487194 CFAP70Q5T0N1 1121 aa8.55□□□□□ -1.04
VAMP3-203ENST00000487194 DISP3Q9P2K9 1392 aa8.55□□□□□ -1.04
VAMP3-203ENST00000487194 SETBP1Q9Y6X0 1596 aa8.55□□□□□ -1.04
VAMP3-203ENST00000487194 KDM5AP29375 1690 aaKnown RBP8.54□□□□□ -1.04
VAMP3-203ENST00000487194 IQGAP1P46940 1657 aa8.54□□□□□ -1.04
VAMP3-203ENST00000487194 A2ML1A8K2U0 1454 aa8.54□□□□□ -1.04
VAMP3-203ENST00000487194 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
VAMP3-203ENST00000487194 C11orf95C9JLR9 678 aaPredicted RBP8.54□□□□□ -1.04
VAMP3-203ENST00000487194 ANP32CO43423 234 aa8.54□□□□□ -1.04
VAMP3-203ENST00000487194 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
VAMP3-203ENST00000487194 FER1L4A9Z1Z3 1794 aa8.53□□□□□ -1.04
VAMP3-203ENST00000487194 TMF1P82094 1093 aa8.53□□□□□ -1.04
VAMP3-203ENST00000487194 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
VAMP3-203ENST00000487194 TESK2Q96S53 571 aa8.52□□□□□ -1.05
VAMP3-203ENST00000487194 RIMS2Q9UQ26 1411 aa8.52□□□□□ -1.05
VAMP3-203ENST00000487194 MYO5BQ9ULV0 1848 aa8.52□□□□□ -1.05
VAMP3-203ENST00000487194 C3P01024 1663 aa8.51□□□□□ -1.05
VAMP3-203ENST00000487194 CCER2I3L3R5 266 aa8.5□□□□□ -1.05
VAMP3-203ENST00000487194 ADGRB1O14514 1584 aa8.5□□□□□ -1.05
VAMP3-203ENST00000487194 NUTM2DQ5VT03 806 aaPredicted RBP8.5□□□□□ -1.05
VAMP3-203ENST00000487194 POLR3GLQ9BT43 218 aa8.5□□□□□ -1.05
VAMP3-203ENST00000487194 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
VAMP3-203ENST00000487194 CEBPAP49715 358 aaPredicted RBP8.49□□□□□ -1.05
VAMP3-203ENST00000487194 CENPJQ9HC77 1338 aaPredicted RBP8.49□□□□□ -1.05
VAMP3-203ENST00000487194 TMEM2Q9UHN6 1383 aa8.48□□□□□ -1.05
VAMP3-203ENST00000487194 MYO3AQ8NEV4 1616 aa8.48□□□□□ -1.05
VAMP3-203ENST00000487194 ADAMTSL3P82987 1691 aa8.48□□□□□ -1.05
VAMP3-203ENST00000487194 UBR1Q8IWV7 1749 aa8.48□□□□□ -1.05
VAMP3-203ENST00000487194 ALKQ9UM73 1620 aa8.47□□□□□ -1.05
VAMP3-203ENST00000487194 TMEM132EQ6IEE7 984 aa8.47□□□□□ -1.05
VAMP3-203ENST00000487194 THEMISQ8N1K5 641 aaPredicted RBP8.47□□□□□ -1.05
VAMP3-203ENST00000487194 TRAK1Q9UPV9 953 aa8.47□□□□□ -1.05
VAMP3-203ENST00000487194 RIMS1Q86UR5 1692 aaKnown RBP8.46□□□□□ -1.05
VAMP3-203ENST00000487194 EID1Q9Y6B2 187 aa8.46□□□□□ -1.06
VAMP3-203ENST00000487194 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
VAMP3-203ENST00000487194 SLIT1O75093 1534 aa8.45□□□□□ -1.06
VAMP3-203ENST00000487194 PUS7Q96PZ0 661 aaKnown RBP8.45□□□□□ -1.06
VAMP3-203ENST00000487194 KTN1Q86UP2 1357 aaKnown RBP8.45□□□□□ -1.06
VAMP3-203ENST00000487194 PLEKHG1Q9ULL1 1385 aa8.45□□□□□ -1.06
VAMP3-203ENST00000487194 ARHGAP23Q9P227 1491 aa8.45□□□□□ -1.06
VAMP3-203ENST00000487194 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
VAMP3-203ENST00000487194 PLPPR3Q6T4P5 718 aa8.44□□□□□ -1.06
VAMP3-203ENST00000487194 TXNDC2Q86VQ3 553 aa8.44□□□□□ -1.06
VAMP3-203ENST00000487194 BCANQ96GW7 911 aa8.44□□□□□ -1.06
VAMP3-203ENST00000487194 PRKRIP1Q9H875 184 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-203ENST00000487194 LRPPRCP42704 1394 aaKnown RBP8.44□□□□□ -1.06
VAMP3-203ENST00000487194 ABCC11Q96J66 1382 aa8.44□□□□□ -1.06
VAMP3-203ENST00000487194 SETD1BQ9UPS6 1966 aaKnown RBP8.44□□□□□ -1.06
VAMP3-203ENST00000487194 DLC1Q96QB1 1528 aa8.44□□□□□ -1.06
VAMP3-203ENST00000487194 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
VAMP3-203ENST00000487194 ARHGEF28Q8N1W1 1705 aaKnown RBP8.43□□□□□ -1.06
VAMP3-203ENST00000487194 CENPBP07199 599 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-203ENST00000487194 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
VAMP3-203ENST00000487194 EVC2Q86UK5 1308 aa8.43□□□□□ -1.06
VAMP3-203ENST00000487194 CEP170BQ9Y4F5 1589 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-203ENST00000487194 RALBP1Q15311 655 aa8.42□□□□□ -1.06
VAMP3-203ENST00000487194 PANK3Q9H999 370 aa8.42□□□□□ -1.06
VAMP3-203ENST00000487194 POGKQ9P215 609 aa8.42□□□□□ -1.06
VAMP3-203ENST00000487194 STK26Q9P289 416 aa8.42□□□□□ -1.06
VAMP3-203ENST00000487194 PTPRMP28827 1452 aa8.42□□□□□ -1.06
VAMP3-203ENST00000487194 NRXN3Q9Y4C0 1643 aa8.42□□□□□ -1.06
VAMP3-203ENST00000487194 SETD1AO15047 1707 aaKnown RBP8.42□□□□□ -1.06
VAMP3-203ENST00000487194 LTKP29376 864 aa8.41□□□□□ -1.06
VAMP3-203ENST00000487194 PRAM1Q96QH2 718 aa8.41□□□□□ -1.06
VAMP3-203ENST00000487194 ZNF142P52746 1687 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-203ENST00000487194 TECPR2O15040 1411 aa8.4□□□□□ -1.06
VAMP3-203ENST00000487194 FAM135BQ49AJ0 1406 aa8.4□□□□□ -1.06
VAMP3-203ENST00000487194 ADAMTS13Q76LX8 1427 aa8.4□□□□□ -1.06
VAMP3-203ENST00000487194 PER1O15534 1290 aaPredicted RBP8.4□□□□□ -1.06
VAMP3-203ENST00000487194 KNSTRNQ9Y448 316 aa8.4□□□□□ -1.06
VAMP3-203ENST00000487194 TBX22Q9Y458 520 aa8.4□□□□□ -1.06
VAMP3-203ENST00000487194 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
VAMP3-203ENST00000487194 MED14O60244 1454 aa8.39□□□□□ -1.07
VAMP3-203ENST00000487194 METP08581 1390 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms