RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 TULP1O00294 542 aaPredicted RBP12.58□□□□□ -0.4
TRA2A-207ENST00000486934 TATDN2Q93075 761 aa12.58□□□□□ -0.4
TRA2A-207ENST00000486934 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
TRA2A-207ENST00000486934 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
TRA2A-207ENST00000486934 RNF40O75150 1001 aa12.56□□□□□ -0.4
TRA2A-207ENST00000486934 ZMYND10O75800 440 aa12.56□□□□□ -0.4
TRA2A-207ENST00000486934 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
TRA2A-207ENST00000486934 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
TRA2A-207ENST00000486934 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.55□□□□□ -0.4
TRA2A-207ENST00000486934 HDGFP51858 240 aaKnown RBP12.54□□□□□ -0.4
TRA2A-207ENST00000486934 NUDT18Q6ZVK8 323 aa12.54□□□□□ -0.4
TRA2A-207ENST00000486934 EYA1Q99502 592 aa12.54□□□□□ -0.4
TRA2A-207ENST00000486934 APLP1P51693 650 aa12.52□□□□□ -0.41
TRA2A-207ENST00000486934 PHOX2BQ99453 314 aa12.52□□□□□ -0.41
TRA2A-207ENST00000486934 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
TRA2A-207ENST00000486934 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
TRA2A-207ENST00000486934 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
TRA2A-207ENST00000486934 NLRP7Q8WX94 980 aa12.48□□□□□ -0.41
TRA2A-207ENST00000486934 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
TRA2A-207ENST00000486934 PXYLP1Q8TE99 480 aa12.46□□□□□ -0.41
TRA2A-207ENST00000486934 IRF6O14896 467 aa12.45□□□□□ -0.42
TRA2A-207ENST00000486934 COPS2P61201 443 aa12.45□□□□□ -0.42
TRA2A-207ENST00000486934 ZNF787Q6DD87 383 aa12.45□□□□□ -0.42
TRA2A-207ENST00000486934 METTL3Q86U44 580 aaKnown RBP12.45□□□□□ -0.42
TRA2A-207ENST00000486934 CCDC102AQ96A19 550 aa12.45□□□□□ -0.42
TRA2A-207ENST00000486934 GGCXP38435 758 aa12.43□□□□□ -0.42
TRA2A-207ENST00000486934 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
TRA2A-207ENST00000486934 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
TRA2A-207ENST00000486934 RCCD1A6NED2 376 aa12.41□□□□□ -0.42
TRA2A-207ENST00000486934 NECTIN2Q92692 538 aa12.41□□□□□ -0.42
TRA2A-207ENST00000486934 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
TRA2A-207ENST00000486934 SLC24A3Q9HC58 644 aa12.4□□□□□ -0.42
TRA2A-207ENST00000486934 SLF2Q8IX21 1173 aa12.39□□□□□ -0.43
TRA2A-207ENST00000486934 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
TRA2A-207ENST00000486934 RBM46Q8TBY0 533 aaKnown RBP12.38□□□□□ -0.43
TRA2A-207ENST00000486934 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
TRA2A-207ENST00000486934 ZPR1O75312 459 aa12.36□□□□□ -0.43
TRA2A-207ENST00000486934 OATP04181 439 aa12.36□□□□□ -0.43
TRA2A-207ENST00000486934 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
TRA2A-207ENST00000486934 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
TRA2A-207ENST00000486934 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
TRA2A-207ENST00000486934 DNAJB2P25686 324 aa12.34□□□□□ -0.43
TRA2A-207ENST00000486934 ZNF775Q96BV0 537 aaPredicted RBP12.34□□□□□ -0.43
TRA2A-207ENST00000486934 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
TRA2A-207ENST00000486934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.32□□□□□ -0.44
TRA2A-207ENST00000486934 TRIM66O15016 1216 aa12.31□□□□□ -0.44
TRA2A-207ENST00000486934 PCDHB3Q9Y5E6 796 aa12.31□□□□□ -0.44
TRA2A-207ENST00000486934 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
TRA2A-207ENST00000486934 SLC19A1P41440 591 aa12.29□□□□□ -0.44
TRA2A-207ENST00000486934 TRIM67Q6ZTA4 783 aa12.29□□□□□ -0.44
TRA2A-207ENST00000486934 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
TRA2A-207ENST00000486934 SLC10A3P09131 477 aa12.28□□□□□ -0.44
TRA2A-207ENST00000486934 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
TRA2A-207ENST00000486934 AK7Q96M32 723 aa12.28□□□□□ -0.44
TRA2A-207ENST00000486934 BLOC1S3Q6QNY0 202 aa12.27□□□□□ -0.45
TRA2A-207ENST00000486934 AMHR2Q16671 573 aa12.26□□□□□ -0.45
TRA2A-207ENST00000486934 EMID1Q96A84 441 aaPredicted RBP12.26□□□□□ -0.45
TRA2A-207ENST00000486934 PKDCCQ504Y2 493 aa12.25□□□□□ -0.45
TRA2A-207ENST00000486934 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
TRA2A-207ENST00000486934 TLL1O43897 1013 aa12.23□□□□□ -0.45
TRA2A-207ENST00000486934 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
TRA2A-207ENST00000486934 MYT1Q01538 1121 aa12.22□□□□□ -0.45
TRA2A-207ENST00000486934 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
TRA2A-207ENST00000486934 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-207ENST00000486934 PDE4DQ08499 809 aa12.21□□□□□ -0.45
TRA2A-207ENST00000486934 ZNF598Q86UK7 904 aaKnown RBP12.21□□□□□ -0.45
TRA2A-207ENST00000486934 DGAT1O75907 488 aa12.2□□□□□ -0.46
TRA2A-207ENST00000486934 ANKLE1Q8NAG6 615 aa12.19□□□□□ -0.46
TRA2A-207ENST00000486934 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
TRA2A-207ENST00000486934 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
TRA2A-207ENST00000486934 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
TRA2A-207ENST00000486934 POTECB2RU33 542 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 S1PR4O95977 384 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 PRR20EP86478 221 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 PRR20CP86479 221 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 PRR20DP86480 221 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 PRR20BP86481 221 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 PRR20AP86496 221 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 GIGYF2Q6Y7W6 1299 aaKnown RBP12.17□□□□□ -0.46
TRA2A-207ENST00000486934 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
TRA2A-207ENST00000486934 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
TRA2A-207ENST00000486934 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
TRA2A-207ENST00000486934 MS4A1P11836 297 aa12.15□□□□□ -0.46
TRA2A-207ENST00000486934 CD46P15529 392 aa12.15□□□□□ -0.46
TRA2A-207ENST00000486934 CLCN1P35523 988 aa12.15□□□□□ -0.46
TRA2A-207ENST00000486934 FAM187AA6NFU0 413 aa12.14□□□□□ -0.47
TRA2A-207ENST00000486934 TNFRSF10AO00220 468 aa12.14□□□□□ -0.47
TRA2A-207ENST00000486934 ACTN4O43707 911 aaKnown RBP12.14□□□□□ -0.47
TRA2A-207ENST00000486934 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
TRA2A-207ENST00000486934 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
TRA2A-207ENST00000486934 CFHP08603 1231 aa12.13□□□□□ -0.47
TRA2A-207ENST00000486934 GDF9O60383 454 aa12.11□□□□□ -0.47
TRA2A-207ENST00000486934 SSTR3P32745 418 aaPredicted RBP12.11□□□□□ -0.47
TRA2A-207ENST00000486934 RDH13Q8NBN7 331 aa12.11□□□□□ -0.47
TRA2A-207ENST00000486934 GCGRP47871 477 aa12.1□□□□□ -0.47
TRA2A-207ENST00000486934 ADH1BP00325 375 aa12.09□□□□□ -0.47
TRA2A-207ENST00000486934 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
TRA2A-207ENST00000486934 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
TRA2A-207ENST00000486934 ST8SIA5O15466 376 aa12.06□□□□□ -0.48
TRA2A-207ENST00000486934 NR1I2O75469 434 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms