RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
PRKCB-207ENST00000486868 TESK2Q96S53 571 aa16.11■□□□□ 0.17
PRKCB-207ENST00000486868 C14orf93Q9H972 538 aaKnown RBP16.11■□□□□ 0.17
PRKCB-207ENST00000486868 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
PRKCB-207ENST00000486868 EIF3AQ14152 1382 aaKnown RBP16.11■□□□□ 0.17
PRKCB-207ENST00000486868 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
PRKCB-207ENST00000486868 SPATA31D1Q6ZQQ2 1576 aa16.1■□□□□ 0.17
PRKCB-207ENST00000486868 PIK3C2GO75747 1445 aa16.1■□□□□ 0.17
PRKCB-207ENST00000486868 SETBP1Q9Y6X0 1596 aa16.09■□□□□ 0.17
PRKCB-207ENST00000486868 PREX1Q8TCU6 1659 aa16.09■□□□□ 0.17
PRKCB-207ENST00000486868 TMF1P82094 1093 aa16.08■□□□□ 0.16
PRKCB-207ENST00000486868 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
PRKCB-207ENST00000486868 CHGAP10645 457 aaKnown RBP16.07■□□□□ 0.16
PRKCB-207ENST00000486868 ESF1Q9H501 851 aaKnown RBP16.07■□□□□ 0.16
PRKCB-207ENST00000486868 MROH2AA6NES4 1674 aa16.07■□□□□ 0.16
PRKCB-207ENST00000486868 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
PRKCB-207ENST00000486868 SBNO2Q9Y2G9 1366 aa16.06■□□□□ 0.16
PRKCB-207ENST00000486868 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
PRKCB-207ENST00000486868 NEXMIFQ5QGS0 1516 aa16.05■□□□□ 0.16
PRKCB-207ENST00000486868 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
PRKCB-207ENST00000486868 PPLO60437 1756 aa16.05■□□□□ 0.16
PRKCB-207ENST00000486868 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
PRKCB-207ENST00000486868 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-207ENST00000486868 PRKRIP1Q9H875 184 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-207ENST00000486868 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
PRKCB-207ENST00000486868 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
PRKCB-207ENST00000486868 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.15
PRKCB-207ENST00000486868 ADGRB1O14514 1584 aa16■□□□□ 0.15
PRKCB-207ENST00000486868 MLECQ14165 292 aa16■□□□□ 0.15
PRKCB-207ENST00000486868 PUS7Q96PZ0 661 aaKnown RBP15.99■□□□□ 0.15
PRKCB-207ENST00000486868 DISP3Q9P2K9 1392 aa15.99■□□□□ 0.15
PRKCB-207ENST00000486868 A2ML1A8K2U0 1454 aa15.98■□□□□ 0.15
PRKCB-207ENST00000486868 HDGFP51858 240 aaKnown RBP15.98■□□□□ 0.15
PRKCB-207ENST00000486868 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRKCB-207ENST00000486868 TNRQ92752 1358 aa15.98■□□□□ 0.15
PRKCB-207ENST00000486868 CFAP65Q6ZU64 1925 aaKnown RBP15.97■□□□□ 0.15
PRKCB-207ENST00000486868 MYO3AQ8NEV4 1616 aa15.97■□□□□ 0.15
PRKCB-207ENST00000486868 RALBP1Q15311 655 aa15.96■□□□□ 0.15
PRKCB-207ENST00000486868 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
PRKCB-207ENST00000486868 KDM5AP29375 1690 aaKnown RBP15.95■□□□□ 0.14
PRKCB-207ENST00000486868 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
PRKCB-207ENST00000486868 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
PRKCB-207ENST00000486868 NLRP1Q9C000 1473 aa15.94■□□□□ 0.14
PRKCB-207ENST00000486868 YTHDC1Q96MU7 727 aaKnown RBP15.93■□□□□ 0.14
PRKCB-207ENST00000486868 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
PRKCB-207ENST00000486868 RIMS2Q9UQ26 1411 aa15.93■□□□□ 0.14
PRKCB-207ENST00000486868 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
PRKCB-207ENST00000486868 PANK3Q9H999 370 aa15.88■□□□□ 0.13
PRKCB-207ENST00000486868 PARD3Q8TEW0 1356 aa15.87■□□□□ 0.13
PRKCB-207ENST00000486868 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
PRKCB-207ENST00000486868 SIRT1Q96EB6 747 aa15.87■□□□□ 0.13
PRKCB-207ENST00000486868 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
PRKCB-207ENST00000486868 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
PRKCB-207ENST00000486868 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
PRKCB-207ENST00000486868 MYBBP1AQ9BQG0 1328 aaKnown RBP15.86■□□□□ 0.13
PRKCB-207ENST00000486868 BRD4O60885 1362 aaPredicted RBP15.86■□□□□ 0.13
PRKCB-207ENST00000486868 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
PRKCB-207ENST00000486868 ASXL1Q8IXJ9 1541 aa15.85■□□□□ 0.13
PRKCB-207ENST00000486868 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
PRKCB-207ENST00000486868 LRPPRCP42704 1394 aaKnown RBP15.85■□□□□ 0.13
PRKCB-207ENST00000486868 ABCC11Q96J66 1382 aa15.85■□□□□ 0.13
PRKCB-207ENST00000486868 NUTM2DQ5VT03 806 aaPredicted RBP15.84■□□□□ 0.13
PRKCB-207ENST00000486868 MRS2Q9HD23 443 aa15.84■□□□□ 0.13
PRKCB-207ENST00000486868 EVC2Q86UK5 1308 aa15.84■□□□□ 0.13
PRKCB-207ENST00000486868 MYO5BQ9ULV0 1848 aa15.84■□□□□ 0.13
PRKCB-207ENST00000486868 NINLQ9Y2I6 1382 aa15.83■□□□□ 0.12
PRKCB-207ENST00000486868 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
PRKCB-207ENST00000486868 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
PRKCB-207ENST00000486868 PTPRMP28827 1452 aa15.81■□□□□ 0.12
PRKCB-207ENST00000486868 ARHGAP23Q9P227 1491 aa15.81■□□□□ 0.12
PRKCB-207ENST00000486868 SLIT1O75093 1534 aa15.8■□□□□ 0.12
PRKCB-207ENST00000486868 INSRP06213 1382 aa15.8■□□□□ 0.12
PRKCB-207ENST00000486868 PLEKHG1Q9ULL1 1385 aa15.8■□□□□ 0.12
PRKCB-207ENST00000486868 AMER1Q5JTC6 1135 aaPredicted RBP15.8■□□□□ 0.12
PRKCB-207ENST00000486868 UBR1Q8IWV7 1749 aa15.8■□□□□ 0.12
PRKCB-207ENST00000486868 ARHGEF28Q8N1W1 1705 aaKnown RBP15.8■□□□□ 0.12
PRKCB-207ENST00000486868 TECPR2O15040 1411 aa15.79■□□□□ 0.12
PRKCB-207ENST00000486868 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
PRKCB-207ENST00000486868 FER1L4A9Z1Z3 1794 aa15.78■□□□□ 0.12
PRKCB-207ENST00000486868 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
PRKCB-207ENST00000486868 C3P01024 1663 aa15.78■□□□□ 0.12
PRKCB-207ENST00000486868 QRICH2Q9H0J4 1663 aa15.78■□□□□ 0.12
PRKCB-207ENST00000486868 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.12
PRKCB-207ENST00000486868 ATAD2Q6PL18 1390 aa15.77■□□□□ 0.12
PRKCB-207ENST00000486868 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
PRKCB-207ENST00000486868 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
PRKCB-207ENST00000486868 CEBPAP49715 358 aaPredicted RBP15.76■□□□□ 0.11
PRKCB-207ENST00000486868 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
PRKCB-207ENST00000486868 MYOM1P52179 1685 aa15.76■□□□□ 0.11
PRKCB-207ENST00000486868 TULP4Q9NRJ4 1543 aa15.75■□□□□ 0.11
PRKCB-207ENST00000486868 SETD1AO15047 1707 aaKnown RBP15.75■□□□□ 0.11
PRKCB-207ENST00000486868 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
PRKCB-207ENST00000486868 POGKQ9P215 609 aa15.75■□□□□ 0.11
PRKCB-207ENST00000486868 MED14O60244 1454 aa15.75■□□□□ 0.11
PRKCB-207ENST00000486868 NRXN3Q9Y4C0 1643 aa15.75■□□□□ 0.11
PRKCB-207ENST00000486868 STK26Q9P289 416 aa15.74■□□□□ 0.11
PRKCB-207ENST00000486868 ADAMTS13Q76LX8 1427 aa15.74■□□□□ 0.11
PRKCB-207ENST00000486868 ADAMTSL3P82987 1691 aa15.73■□□□□ 0.11
PRKCB-207ENST00000486868 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
PRKCB-207ENST00000486868 TBX22Q9Y458 520 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms