RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 NUTM2AQ8IVF1 878 aaPredicted RBP24.7■■□□□ 1.54
U2AF1-211ENST00000486519 SETBP1Q9Y6X0 1596 aa24.7■■□□□ 1.54
U2AF1-211ENST00000486519 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.69■■□□□ 1.54
U2AF1-211ENST00000486519 STAG3Q9UJ98 1225 aa24.69■■□□□ 1.54
U2AF1-211ENST00000486519 MYO5BQ9ULV0 1848 aa24.68■■□□□ 1.54
U2AF1-211ENST00000486519 AFF2P51816 1311 aa24.68■■□□□ 1.54
U2AF1-211ENST00000486519 DUOX2Q9NRD8 1548 aa24.66■■□□□ 1.54
U2AF1-211ENST00000486519 ADGRB3O60242 1522 aa24.66■■□□□ 1.54
U2AF1-211ENST00000486519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.61■■□□□ 1.53
U2AF1-211ENST00000486519 BCANQ96GW7 911 aa24.59■■□□□ 1.53
U2AF1-211ENST00000486519 NUTM2DQ5VT03 806 aaPredicted RBP24.58■■□□□ 1.53
U2AF1-211ENST00000486519 ZFYVE9O95405 1425 aa24.57■■□□□ 1.52
U2AF1-211ENST00000486519 BRINP3Q76B58 766 aa24.56■■□□□ 1.52
U2AF1-211ENST00000486519 NOS1P29475 1434 aa24.55■■□□□ 1.52
U2AF1-211ENST00000486519 QTRT2Q9H974 415 aaKnown RBP24.55■■□□□ 1.52
U2AF1-211ENST00000486519 KIF15Q9NS87 1388 aa24.54■■□□□ 1.52
U2AF1-211ENST00000486519 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
U2AF1-211ENST00000486519 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
U2AF1-211ENST00000486519 RBM6P78332 1123 aaKnown RBP24.53■■□□□ 1.52
U2AF1-211ENST00000486519 C8orf37Q96NL8 207 aa24.53■■□□□ 1.52
U2AF1-211ENST00000486519 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
U2AF1-211ENST00000486519 PLEKHG1Q9ULL1 1385 aa24.53■■□□□ 1.52
U2AF1-211ENST00000486519 C14orf37Q86TY3 774 aa24.52■■□□□ 1.52
U2AF1-211ENST00000486519 ERBINQ96RT1 1412 aa24.52■■□□□ 1.52
U2AF1-211ENST00000486519 LMTK2Q8IWU2 1503 aa24.51■■□□□ 1.51
U2AF1-211ENST00000486519 NCOA3Q9Y6Q9 1424 aa24.51■■□□□ 1.51
U2AF1-211ENST00000486519 ASXL1Q8IXJ9 1541 aa24.51■■□□□ 1.51
U2AF1-211ENST00000486519 RRP7BPQ9NSQ0 103 aa24.5■■□□□ 1.51
U2AF1-211ENST00000486519 CADPS2Q86UW7 1296 aa24.48■■□□□ 1.51
U2AF1-211ENST00000486519 EP400Q96L91 3159 aa24.48■■□□□ 1.51
U2AF1-211ENST00000486519 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
U2AF1-211ENST00000486519 ZRANB1Q9UGI0 708 aa24.48■■□□□ 1.51
U2AF1-211ENST00000486519 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
U2AF1-211ENST00000486519 RIMS2Q9UQ26 1411 aa24.47■■□□□ 1.51
U2AF1-211ENST00000486519 DDX17Q92841 729 aaKnown RBP24.47■■□□□ 1.51
U2AF1-211ENST00000486519 C19orf44Q9H6X5 657 aa24.47■■□□□ 1.51
U2AF1-211ENST00000486519 ATAD2Q6PL18 1390 aa24.46■■□□□ 1.51
U2AF1-211ENST00000486519 ATF3P18847 181 aa24.46■■□□□ 1.51
U2AF1-211ENST00000486519 TMEM131LA2VDJ0 1609 aa24.46■■□□□ 1.51
U2AF1-211ENST00000486519 ABCC5O15440 1437 aa24.44■■□□□ 1.5
U2AF1-211ENST00000486519 PNPLA6Q8IY17 1366 aa24.43■■□□□ 1.5
U2AF1-211ENST00000486519 MYOM3Q5VTT5 1437 aa24.43■■□□□ 1.5
U2AF1-211ENST00000486519 PTPRUQ92729 1446 aa24.43■■□□□ 1.5
U2AF1-211ENST00000486519 TBX22Q9Y458 520 aa24.42■■□□□ 1.5
U2AF1-211ENST00000486519 KANK1Q14678 1352 aa24.42■■□□□ 1.5
U2AF1-211ENST00000486519 MST1RQ04912 1400 aa24.39■■□□□ 1.5
U2AF1-211ENST00000486519 PPP1R15AO75807 674 aaPredicted RBP24.39■■□□□ 1.49
U2AF1-211ENST00000486519 ADAMTS2O95450 1211 aa24.38■■□□□ 1.49
U2AF1-211ENST00000486519 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
U2AF1-211ENST00000486519 SLC52A1Q9NWF4 448 aa24.36■■□□□ 1.49
U2AF1-211ENST00000486519 NGLY1Q96IV0 654 aa24.34■■□□□ 1.49
U2AF1-211ENST00000486519 LRRC59Q96AG4 307 aaKnown RBP24.33■■□□□ 1.49
U2AF1-211ENST00000486519 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
U2AF1-211ENST00000486519 TRPM2O94759 1503 aa24.32■■□□□ 1.48
U2AF1-211ENST00000486519 DCCP43146 1447 aa24.31■■□□□ 1.48
U2AF1-211ENST00000486519 AMOTL2Q9Y2J4 779 aa24.31■■□□□ 1.48
U2AF1-211ENST00000486519 DAPK1P53355 1430 aa24.3■■□□□ 1.48
U2AF1-211ENST00000486519 UNC13BO14795 1591 aa24.29■■□□□ 1.48
U2AF1-211ENST00000486519 ATRNO75882 1429 aa24.29■■□□□ 1.48
U2AF1-211ENST00000486519 LRP5O75197 1615 aa24.29■■□□□ 1.48
U2AF1-211ENST00000486519 PTPN23Q9H3S7 1636 aa24.29■■□□□ 1.48
U2AF1-211ENST00000486519 USP21Q9UK80 565 aa24.29■■□□□ 1.48
U2AF1-211ENST00000486519 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
U2AF1-211ENST00000486519 NRXN3Q9Y4C0 1643 aa24.28■■□□□ 1.48
U2AF1-211ENST00000486519 NALCNQ8IZF0 1738 aa24.27■■□□□ 1.48
U2AF1-211ENST00000486519 CHIC2Q9UKJ5 165 aa24.27■■□□□ 1.48
U2AF1-211ENST00000486519 RPRD2Q5VT52 1461 aaKnown RBP24.25■■□□□ 1.47
U2AF1-211ENST00000486519 CHGAP10645 457 aaKnown RBP24.24■■□□□ 1.47
U2AF1-211ENST00000486519 TRPC5Q9UL62 973 aaPredicted RBP24.24■■□□□ 1.47
U2AF1-211ENST00000486519 LAMC1P11047 1609 aa24.22■■□□□ 1.47
U2AF1-211ENST00000486519 FOXD1Q16676 465 aa24.22■■□□□ 1.47
U2AF1-211ENST00000486519 HDGFP51858 240 aaKnown RBP24.2■■□□□ 1.46
U2AF1-211ENST00000486519 DEFB132Q7Z7B7 95 aa24.2■■□□□ 1.46
U2AF1-211ENST00000486519 FNBP4Q8N3X1 1017 aaPredicted RBP24.2■■□□□ 1.46
U2AF1-211ENST00000486519 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.2■■□□□ 1.46
U2AF1-211ENST00000486519 BRWD3Q6RI45 1802 aa24.19■■□□□ 1.46
U2AF1-211ENST00000486519 E9PCH4 1651 aa24.18■■□□□ 1.46
U2AF1-211ENST00000486519 CCDC125Q86Z20 511 aa24.18■■□□□ 1.46
U2AF1-211ENST00000486519 ANKRD30AQ9BXX3 1397 aa24.17■■□□□ 1.46
U2AF1-211ENST00000486519 MARF1Q9Y4F3 1742 aaKnown RBP24.17■■□□□ 1.46
U2AF1-211ENST00000486519 BCL9LQ86UU0 1499 aa24.17■■□□□ 1.46
U2AF1-211ENST00000486519 COL22A1Q8NFW1 1626 aaPredicted RBP24.16■■□□□ 1.46
U2AF1-211ENST00000486519 ADGRL3Q9HAR2 1447 aa24.16■■□□□ 1.46
U2AF1-211ENST00000486519 PTCH1Q13635 1447 aa24.15■■□□□ 1.46
U2AF1-211ENST00000486519 C1orf167Q5SNV9 1468 aa24.14■■□□□ 1.46
U2AF1-211ENST00000486519 METP08581 1390 aa24.14■■□□□ 1.45
U2AF1-211ENST00000486519 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
U2AF1-211ENST00000486519 GLI3P10071 1580 aa24.12■■□□□ 1.45
U2AF1-211ENST00000486519 BLMP54132 1417 aaPredicted RBP24.12■■□□□ 1.45
U2AF1-211ENST00000486519 SOS2Q07890 1332 aaPredicted RBP24.11■■□□□ 1.45
U2AF1-211ENST00000486519 ORAI2Q96SN7 254 aa24.1■■□□□ 1.45
U2AF1-211ENST00000486519 MYOM2P54296 1465 aa24.1■■□□□ 1.45
U2AF1-211ENST00000486519 PSDA5PKW4 1024 aaPredicted RBP24.08■■□□□ 1.45
U2AF1-211ENST00000486519 ADGRL2O95490 1459 aa24.07■■□□□ 1.44
U2AF1-211ENST00000486519 GJD4Q96KN9 370 aaPredicted RBP24.06■■□□□ 1.44
U2AF1-211ENST00000486519 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.06■■□□□ 1.44
U2AF1-211ENST00000486519 ANKRD50Q9ULJ7 1429 aa24.04■■□□□ 1.44
U2AF1-211ENST00000486519 RALGAPBQ86X10 1494 aa24.03■■□□□ 1.44
U2AF1-211ENST00000486519 HRCP23327 699 aa24.01■■□□□ 1.43
U2AF1-211ENST00000486519 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms