RNA–Protein interactions for RNA: ENST00000486375.1

COLGALT2-204, Transcript of collagen beta(1-O)galactosyltransferase 2, humanhuman

TSL 2

Gene COLGALT2, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2-204ENST00000486375 LAMC1P11047 1609 aa18.28■□□□□ 0.52
COLGALT2-204ENST00000486375 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
COLGALT2-204ENST00000486375 EIF3AQ14152 1382 aaKnown RBP18.28■□□□□ 0.52
COLGALT2-204ENST00000486375 CFAP65Q6ZU64 1925 aaKnown RBP18.27■□□□□ 0.52
COLGALT2-204ENST00000486375 TRPM1Q7Z4N2 1603 aa18.27■□□□□ 0.52
COLGALT2-204ENST00000486375 IFT172Q9UG01 1749 aa18.27■□□□□ 0.52
COLGALT2-204ENST00000486375 KIAA1210Q9ULL0 1709 aa18.27■□□□□ 0.52
COLGALT2-204ENST00000486375 RIMS1Q86UR5 1692 aaKnown RBP18.27■□□□□ 0.52
COLGALT2-204ENST00000486375 USP47Q96K76 1375 aa18.27■□□□□ 0.51
COLGALT2-204ENST00000486375 A2ML1A8K2U0 1454 aa18.26■□□□□ 0.51
COLGALT2-204ENST00000486375 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
COLGALT2-204ENST00000486375 PPLO60437 1756 aa18.25■□□□□ 0.51
COLGALT2-204ENST00000486375 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
COLGALT2-204ENST00000486375 PIK3C2GO75747 1445 aa18.24■□□□□ 0.51
COLGALT2-204ENST00000486375 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
COLGALT2-204ENST00000486375 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
COLGALT2-204ENST00000486375 CEBPAP49715 358 aaPredicted RBP18.23■□□□□ 0.51
COLGALT2-204ENST00000486375 EID1Q9Y6B2 187 aa18.23■□□□□ 0.51
COLGALT2-204ENST00000486375 ADGRF5Q8IZF2 1346 aa18.22■□□□□ 0.51
COLGALT2-204ENST00000486375 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
COLGALT2-204ENST00000486375 TMEM2Q9UHN6 1383 aa18.2■□□□□ 0.5
COLGALT2-204ENST00000486375 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
COLGALT2-204ENST00000486375 C14orf93Q9H972 538 aaKnown RBP18.2■□□□□ 0.5
COLGALT2-204ENST00000486375 SCAF11Q99590 1463 aaKnown RBP18.2■□□□□ 0.5
COLGALT2-204ENST00000486375 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
COLGALT2-204ENST00000486375 PTPRMP28827 1452 aa18.19■□□□□ 0.5
COLGALT2-204ENST00000486375 UBR1Q8IWV7 1749 aa18.17■□□□□ 0.5
COLGALT2-204ENST00000486375 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
COLGALT2-204ENST00000486375 CEP170BQ9Y4F5 1589 aaPredicted RBP18.16■□□□□ 0.5
COLGALT2-204ENST00000486375 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
COLGALT2-204ENST00000486375 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
COLGALT2-204ENST00000486375 SLIT1O75093 1534 aa18.14■□□□□ 0.49
COLGALT2-204ENST00000486375 CDCA8Q53HL2 280 aa18.14■□□□□ 0.49
COLGALT2-204ENST00000486375 BCANQ96GW7 911 aa18.13■□□□□ 0.49
COLGALT2-204ENST00000486375 ZNF142P52746 1687 aaPredicted RBP18.12■□□□□ 0.49
COLGALT2-204ENST00000486375 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
COLGALT2-204ENST00000486375 PLEKHG1Q9ULL1 1385 aa18.12■□□□□ 0.49
COLGALT2-204ENST00000486375 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
COLGALT2-204ENST00000486375 MYO5BQ9ULV0 1848 aa18.12■□□□□ 0.49
COLGALT2-204ENST00000486375 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
COLGALT2-204ENST00000486375 NUTM2DQ5VT03 806 aaPredicted RBP18.11■□□□□ 0.49
COLGALT2-204ENST00000486375 TMF1P82094 1093 aa18.1■□□□□ 0.49
COLGALT2-204ENST00000486375 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
COLGALT2-204ENST00000486375 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
COLGALT2-204ENST00000486375 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.49
COLGALT2-204ENST00000486375 ANKLE2Q86XL3 938 aa18.08■□□□□ 0.48
COLGALT2-204ENST00000486375 ADGRB1O14514 1584 aa18.08■□□□□ 0.48
COLGALT2-204ENST00000486375 ALKQ9UM73 1620 aa18.07■□□□□ 0.48
COLGALT2-204ENST00000486375 CCDC7Q96M83 1385 aa18.06■□□□□ 0.48
COLGALT2-204ENST00000486375 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
COLGALT2-204ENST00000486375 CENPJQ9HC77 1338 aaPredicted RBP18.06■□□□□ 0.48
COLGALT2-204ENST00000486375 DIP2AQ14689 1571 aa18.06■□□□□ 0.48
COLGALT2-204ENST00000486375 YTHDC2Q9H6S0 1430 aaKnown RBP18.04■□□□□ 0.48
COLGALT2-204ENST00000486375 POLR1AO95602 1720 aaPredicted RBP18.03■□□□□ 0.48
COLGALT2-204ENST00000486375 LRPPRCP42704 1394 aaKnown RBP18.03■□□□□ 0.48
COLGALT2-204ENST00000486375 WASHC2AQ641Q2 1341 aa18.02■□□□□ 0.48
COLGALT2-204ENST00000486375 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.48
COLGALT2-204ENST00000486375 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
COLGALT2-204ENST00000486375 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
COLGALT2-204ENST00000486375 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
COLGALT2-204ENST00000486375 DLC1Q96QB1 1528 aa18.01■□□□□ 0.47
COLGALT2-204ENST00000486375 LTKP29376 864 aa18■□□□□ 0.47
COLGALT2-204ENST00000486375 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
COLGALT2-204ENST00000486375 SIRT1Q96EB6 747 aa18■□□□□ 0.47
COLGALT2-204ENST00000486375 POGKQ9P215 609 aa18■□□□□ 0.47
COLGALT2-204ENST00000486375 ABCC11Q96J66 1382 aa18■□□□□ 0.47
COLGALT2-204ENST00000486375 PIK3R4Q99570 1358 aa18■□□□□ 0.47
COLGALT2-204ENST00000486375 TESK2Q96S53 571 aa17.99■□□□□ 0.47
COLGALT2-204ENST00000486375 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
COLGALT2-204ENST00000486375 PUS7Q96PZ0 661 aaKnown RBP17.97■□□□□ 0.47
COLGALT2-204ENST00000486375 STK26Q9P289 416 aa17.97■□□□□ 0.47
COLGALT2-204ENST00000486375 EVC2Q86UK5 1308 aa17.97■□□□□ 0.47
COLGALT2-204ENST00000486375 KDM4FA0A1W2PPD8 638 aa17.96■□□□□ 0.47
COLGALT2-204ENST00000486375 NRXN3Q9Y4C0 1643 aa17.96■□□□□ 0.47
COLGALT2-204ENST00000486375 ASXL1Q8IXJ9 1541 aa17.96■□□□□ 0.47
COLGALT2-204ENST00000486375 TECPR2O15040 1411 aa17.96■□□□□ 0.47
COLGALT2-204ENST00000486375 FAM135BQ49AJ0 1406 aa17.96■□□□□ 0.47
COLGALT2-204ENST00000486375 ADAMTS13Q76LX8 1427 aa17.96■□□□□ 0.47
COLGALT2-204ENST00000486375 ANP32CO43423 234 aa17.94■□□□□ 0.46
COLGALT2-204ENST00000486375 MED14O60244 1454 aa17.94■□□□□ 0.46
COLGALT2-204ENST00000486375 ARHGEF28Q8N1W1 1705 aaKnown RBP17.93■□□□□ 0.46
COLGALT2-204ENST00000486375 NPHP4O75161 1426 aaPredicted RBP17.93■□□□□ 0.46
COLGALT2-204ENST00000486375 METP08581 1390 aa17.92■□□□□ 0.46
COLGALT2-204ENST00000486375 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
COLGALT2-204ENST00000486375 KNDC1Q76NI1 1749 aa17.92■□□□□ 0.46
COLGALT2-204ENST00000486375 PRAM1Q96QH2 718 aa17.92■□□□□ 0.46
COLGALT2-204ENST00000486375 QRICH2Q9H0J4 1663 aa17.92■□□□□ 0.46
COLGALT2-204ENST00000486375 CPS1P31327 1500 aa17.92■□□□□ 0.46
COLGALT2-204ENST00000486375 C11orf95C9JLR9 678 aaPredicted RBP17.91■□□□□ 0.46
COLGALT2-204ENST00000486375 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
COLGALT2-204ENST00000486375 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
COLGALT2-204ENST00000486375 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
COLGALT2-204ENST00000486375 SLC26A8Q96RN1 970 aa17.9■□□□□ 0.46
COLGALT2-204ENST00000486375 PTCH1Q13635 1447 aa17.89■□□□□ 0.46
COLGALT2-204ENST00000486375 ATAD2Q6PL18 1390 aa17.88■□□□□ 0.45
COLGALT2-204ENST00000486375 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
COLGALT2-204ENST00000486375 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
COLGALT2-204ENST00000486375 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
COLGALT2-204ENST00000486375 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.44
COLGALT2-204ENST00000486375 SAFB2Q14151 953 aaKnown RBP eCLIP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms