RNA–Protein interactions for RNA: ENST00000486320.1

NEB-214, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 353 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-214ENST00000486320 FECHP22830 423 aa9.12□□□□□ -0.95
NEB-214ENST00000486320 HIC1Q14526 733 aa9.12□□□□□ -0.95
NEB-214ENST00000486320 GPR37O15354 613 aa9.11□□□□□ -0.95
NEB-214ENST00000486320 PPP1R18Q6NYC8 613 aa9.11□□□□□ -0.95
NEB-214ENST00000486320 PXYLP1Q8TE99 480 aa9.11□□□□□ -0.95
NEB-214ENST00000486320 PCDHB3Q9Y5E6 796 aa9.1□□□□□ -0.95
NEB-214ENST00000486320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
NEB-214ENST00000486320 BLOC1S3Q6QNY0 202 aa9.09□□□□□ -0.95
NEB-214ENST00000486320 GNPATO15228 680 aa9.08□□□□□ -0.96
NEB-214ENST00000486320 CFHP08603 1231 aa9.08□□□□□ -0.96
NEB-214ENST00000486320 SLC10A3P09131 477 aa9.08□□□□□ -0.96
NEB-214ENST00000486320 METTL3Q86U44 580 aaKnown RBP9.08□□□□□ -0.96
NEB-214ENST00000486320 PRR14Q9BWN1 585 aa9.08□□□□□ -0.96
NEB-214ENST00000486320 TLL1O43897 1013 aa9.07□□□□□ -0.96
NEB-214ENST00000486320 ZPR1O75312 459 aa9.07□□□□□ -0.96
NEB-214ENST00000486320 NLRP7Q8WX94 980 aa9.07□□□□□ -0.96
NEB-214ENST00000486320 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
NEB-214ENST00000486320 OATP04181 439 aa9.06□□□□□ -0.96
NEB-214ENST00000486320 PRKD2Q9BZL6 878 aa9.06□□□□□ -0.96
NEB-214ENST00000486320 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
NEB-214ENST00000486320 KMT5BQ4FZB7 885 aa9.05□□□□□ -0.96
NEB-214ENST00000486320 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
NEB-214ENST00000486320 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
NEB-214ENST00000486320 GGCXP38435 758 aa9.01□□□□□ -0.97
NEB-214ENST00000486320 Q6ZNB5 142 aa9□□□□□ -0.97
NEB-214ENST00000486320 PHOX2BQ99453 314 aa9□□□□□ -0.97
NEB-214ENST00000486320 PUS10Q3MIT2 529 aaKnown RBP8.99□□□□□ -0.97
NEB-214ENST00000486320 RDH13Q8NBN7 331 aa8.99□□□□□ -0.97
NEB-214ENST00000486320 V9GY48 417 aaPredicted RBP8.98□□□□□ -0.97
NEB-214ENST00000486320 DDX11L8A8MPP1 907 aa8.97□□□□□ -0.97
NEB-214ENST00000486320 RNF223E7ERA6 249 aa8.97□□□□□ -0.97
NEB-214ENST00000486320 GFRA3O60609 400 aa8.97□□□□□ -0.97
NEB-214ENST00000486320 S1PR4O95977 384 aa8.97□□□□□ -0.97
NEB-214ENST00000486320 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
NEB-214ENST00000486320 PPEF1O14829 653 aaPredicted RBP8.96□□□□□ -0.98
NEB-214ENST00000486320 TMUB1Q9BVT8 246 aa8.96□□□□□ -0.98
NEB-214ENST00000486320 NR1I2O75469 434 aa8.95□□□□□ -0.98
NEB-214ENST00000486320 RSPH4AQ5TD94 716 aa8.95□□□□□ -0.98
NEB-214ENST00000486320 ADH1BP00325 375 aa8.94□□□□□ -0.98
NEB-214ENST00000486320 EMID1Q96A84 441 aaPredicted RBP8.94□□□□□ -0.98
NEB-214ENST00000486320 FUT2Q10981 343 aa8.93□□□□□ -0.98
NEB-214ENST00000486320 SCUBE3Q8IX30 993 aa8.93□□□□□ -0.98
NEB-214ENST00000486320 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
NEB-214ENST00000486320 LCE2BO14633 110 aa8.91□□□□□ -0.98
NEB-214ENST00000486320 MAP2K5Q13163 448 aa8.91□□□□□ -0.98
NEB-214ENST00000486320 LAPTM4AQ15012 233 aa8.91□□□□□ -0.98
NEB-214ENST00000486320 SLC19A1P41440 591 aa8.9□□□□□ -0.98
NEB-214ENST00000486320 SULF1Q8IWU6 871 aa8.9□□□□□ -0.98
NEB-214ENST00000486320 ANKLE1Q8NAG6 615 aa8.9□□□□□ -0.98
NEB-214ENST00000486320 SLC6A16Q9GZN6 736 aa8.9□□□□□ -0.98
NEB-214ENST00000486320 NRG2O14511 850 aaPredicted RBP8.89□□□□□ -0.99
NEB-214ENST00000486320 GCGRP47871 477 aa8.89□□□□□ -0.99
NEB-214ENST00000486320 MORN1Q5T089 497 aa8.89□□□□□ -0.99
NEB-214ENST00000486320 SPSB2Q99619 263 aa8.89□□□□□ -0.99
NEB-214ENST00000486320 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
NEB-214ENST00000486320 PLA2G2CQ5R387 149 aa8.88□□□□□ -0.99
NEB-214ENST00000486320 IRF6O14896 467 aa8.87□□□□□ -0.99
NEB-214ENST00000486320 ATP6V1AP38606 617 aa8.87□□□□□ -0.99
NEB-214ENST00000486320 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
NEB-214ENST00000486320 CCDC102AQ96A19 550 aa8.87□□□□□ -0.99
NEB-214ENST00000486320 SLC27A5Q9Y2P5 690 aa8.87□□□□□ -0.99
NEB-214ENST00000486320 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
NEB-214ENST00000486320 SPRYD7Q5W111 196 aa8.86□□□□□ -0.99
NEB-214ENST00000486320 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
NEB-214ENST00000486320 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
NEB-214ENST00000486320 THAP11Q96EK4 314 aa8.85□□□□□ -0.99
NEB-214ENST00000486320 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
NEB-214ENST00000486320 CD46P15529 392 aa8.84□□□□□ -0.99
NEB-214ENST00000486320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.84□□□□□ -0.99
NEB-214ENST00000486320 PRDM9Q9NQV7 894 aa8.84□□□□□ -0.99
NEB-214ENST00000486320 FMNL1O95466 1100 aaPredicted RBP8.83□□□□□ -1
NEB-214ENST00000486320 ZNF697Q5TEC3 545 aa8.83□□□□□ -1
NEB-214ENST00000486320 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
NEB-214ENST00000486320 ZNF598Q86UK7 904 aaKnown RBP8.83□□□□□ -1
NEB-214ENST00000486320 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
NEB-214ENST00000486320 FAM160A2Q8N612 972 aaPredicted RBP8.82□□□□□ -1
NEB-214ENST00000486320 FCF1Q9Y324 198 aaKnown RBP8.81□□□□□ -1
NEB-214ENST00000486320 TNFRSF10AO00220 468 aa8.8□□□□□ -1
NEB-214ENST00000486320 BRICD5Q6PL45 260 aa8.8□□□□□ -1
NEB-214ENST00000486320 HLA-CQ95604 372 aa8.8□□□□□ -1
NEB-214ENST00000486320 KDM4AO75164 1064 aa8.78□□□□□ -1
NEB-214ENST00000486320 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
NEB-214ENST00000486320 GDF9O60383 454 aa8.77□□□□□ -1.01
NEB-214ENST00000486320 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
NEB-214ENST00000486320 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1.01
NEB-214ENST00000486320 PRR20EP86478 221 aa8.76□□□□□ -1.01
NEB-214ENST00000486320 PRR20CP86479 221 aa8.76□□□□□ -1.01
NEB-214ENST00000486320 PRR20DP86480 221 aa8.76□□□□□ -1.01
NEB-214ENST00000486320 PRR20BP86481 221 aa8.76□□□□□ -1.01
NEB-214ENST00000486320 PRR20AP86496 221 aa8.76□□□□□ -1.01
NEB-214ENST00000486320 MSS51Q4VC12 460 aa8.76□□□□□ -1.01
NEB-214ENST00000486320 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
NEB-214ENST00000486320 CLCN1P35523 988 aa8.75□□□□□ -1.01
NEB-214ENST00000486320 GUCA2AQ02747 115 aa8.75□□□□□ -1.01
NEB-214ENST00000486320 FOXC1Q12948 553 aa8.75□□□□□ -1.01
NEB-214ENST00000486320 REPIN1Q9BWE0 567 aaKnown RBP8.75□□□□□ -1.01
NEB-214ENST00000486320 HOXA2O43364 376 aa8.74□□□□□ -1.01
NEB-214ENST00000486320 KRI1Q8N9T8 703 aaKnown RBP8.74□□□□□ -1.01
NEB-214ENST00000486320 FAM187AA6NFU0 413 aa8.73□□□□□ -1.01
NEB-214ENST00000486320 Q3C1V9 767 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms