RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 AMER1Q5JTC6 1135 aaPredicted RBP23.24■■□□□ 1.31
TNXB-205ENST00000486148 FANCAO15360 1455 aa23.24■■□□□ 1.31
TNXB-205ENST00000486148 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
TNXB-205ENST00000486148 ABCA9Q8IUA7 1624 aa23.23■■□□□ 1.31
TNXB-205ENST00000486148 PLIN1O60240 522 aa23.23■■□□□ 1.31
TNXB-205ENST00000486148 SYNMO15061 1565 aa23.23■■□□□ 1.31
TNXB-205ENST00000486148 STAC3Q96MF2 364 aa23.22■■□□□ 1.31
TNXB-205ENST00000486148 KIF3BO15066 747 aa23.22■■□□□ 1.31
TNXB-205ENST00000486148 KANK1Q14678 1352 aa23.21■■□□□ 1.31
TNXB-205ENST00000486148 CDCA8Q53HL2 280 aa23.2■■□□□ 1.3
TNXB-205ENST00000486148 MYOM1P52179 1685 aa23.19■■□□□ 1.3
TNXB-205ENST00000486148 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
TNXB-205ENST00000486148 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
TNXB-205ENST00000486148 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
TNXB-205ENST00000486148 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
TNXB-205ENST00000486148 ANP32AP39687 249 aaKnown RBP23.16■■□□□ 1.3
TNXB-205ENST00000486148 PLEKHH1Q9ULM0 1364 aa23.16■■□□□ 1.3
TNXB-205ENST00000486148 WDR43Q15061 677 aaKnown RBP eCLIP23.16■■□□□ 1.3
TNXB-205ENST00000486148 KIAA1210Q9ULL0 1709 aa23.15■■□□□ 1.3
TNXB-205ENST00000486148 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
TNXB-205ENST00000486148 IPO9Q96P70 1041 aaKnown RBP23.15■■□□□ 1.3
TNXB-205ENST00000486148 CRBNQ96SW2 442 aa23.15■■□□□ 1.3
TNXB-205ENST00000486148 CFAP70Q5T0N1 1121 aa23.14■■□□□ 1.29
TNXB-205ENST00000486148 IL27Q8NEV9 243 aa23.14■■□□□ 1.29
TNXB-205ENST00000486148 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
TNXB-205ENST00000486148 ADGRF5Q8IZF2 1346 aa23.12■■□□□ 1.29
TNXB-205ENST00000486148 NEURL4Q96JN8 1562 aa23.12■■□□□ 1.29
TNXB-205ENST00000486148 ABCA6Q8N139 1617 aa23.12■■□□□ 1.29
TNXB-205ENST00000486148 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
TNXB-205ENST00000486148 KDM5AP29375 1690 aaKnown RBP23.11■■□□□ 1.29
TNXB-205ENST00000486148 PIK3C2GO75747 1445 aa23.11■■□□□ 1.29
TNXB-205ENST00000486148 C20orf194Q5TEA3 1177 aa23.1■■□□□ 1.29
TNXB-205ENST00000486148 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
TNXB-205ENST00000486148 MYOM2P54296 1465 aa23.1■■□□□ 1.29
TNXB-205ENST00000486148 DUSP27Q5VZP5 1158 aa23.09■■□□□ 1.29
TNXB-205ENST00000486148 NPC1L1Q9UHC9 1359 aa23.09■■□□□ 1.29
TNXB-205ENST00000486148 ERVK-7P63135 1459 aa23.08■■□□□ 1.29
TNXB-205ENST00000486148 EFCAB6Q5THR3 1501 aa23.08■■□□□ 1.28
TNXB-205ENST00000486148 ASXL2Q76L83 1435 aa23.07■■□□□ 1.28
TNXB-205ENST00000486148 KIF1BO60333 1816 aa23.07■■□□□ 1.28
TNXB-205ENST00000486148 PDE4AP27815 886 aa23.07■■□□□ 1.28
TNXB-205ENST00000486148 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
TNXB-205ENST00000486148 KIDINS220Q9ULH0 1771 aa23.06■■□□□ 1.28
TNXB-205ENST00000486148 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
TNXB-205ENST00000486148 PPRC1Q5VV67 1664 aaKnown RBP23.05■■□□□ 1.28
TNXB-205ENST00000486148 SKAP1Q86WV1 359 aa23.05■■□□□ 1.28
TNXB-205ENST00000486148 GOLGA2Q08379 1002 aa23.04■■□□□ 1.28
TNXB-205ENST00000486148 CCDC146Q8IYE0 955 aa23.04■■□□□ 1.28
TNXB-205ENST00000486148 RTN4Q9NQC3 1192 aaKnown RBP23.04■■□□□ 1.28
TNXB-205ENST00000486148 ZBTB47Q9UFB7 747 aaPredicted RBP23.04■■□□□ 1.28
TNXB-205ENST00000486148 MS4A1P11836 297 aa23.03■■□□□ 1.28
TNXB-205ENST00000486148 CARD14Q9BXL6 1004 aa23.03■■□□□ 1.28
TNXB-205ENST00000486148 BACH2Q9BYV9 841 aa23.03■■□□□ 1.28
TNXB-205ENST00000486148 NPM2Q86SE8 214 aaKnown RBP23.02■■□□□ 1.28
TNXB-205ENST00000486148 RTL5Q5HYW3 569 aaPredicted RBP23.02■■□□□ 1.28
TNXB-205ENST00000486148 NRXN1Q9ULB1 1477 aa23■■□□□ 1.27
TNXB-205ENST00000486148 SLFN5Q08AF3 891 aa23■■□□□ 1.27
TNXB-205ENST00000486148 LMTK2Q8IWU2 1503 aa22.99■■□□□ 1.27
TNXB-205ENST00000486148 NOS1P29475 1434 aa22.98■■□□□ 1.27
TNXB-205ENST00000486148 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
TNXB-205ENST00000486148 APAF1O14727 1248 aa22.97■■□□□ 1.27
TNXB-205ENST00000486148 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
TNXB-205ENST00000486148 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.97■■□□□ 1.27
TNXB-205ENST00000486148 MYO3AQ8NEV4 1616 aa22.97■■□□□ 1.27
TNXB-205ENST00000486148 ZNF518AQ6AHZ1 1483 aa22.97■■□□□ 1.27
TNXB-205ENST00000486148 ADGRB3O60242 1522 aa22.96■■□□□ 1.27
TNXB-205ENST00000486148 KDM2BQ8NHM5 1336 aa22.96■■□□□ 1.27
TNXB-205ENST00000486148 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.27
TNXB-205ENST00000486148 TRMT2AQ8IZ69 625 aaKnown RBP22.95■■□□□ 1.27
TNXB-205ENST00000486148 SBNO2Q9Y2G9 1366 aa22.93■■□□□ 1.26
TNXB-205ENST00000486148 CENPJQ9HC77 1338 aaPredicted RBP22.92■■□□□ 1.26
TNXB-205ENST00000486148 NPATQ14207 1427 aa22.92■■□□□ 1.26
TNXB-205ENST00000486148 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
TNXB-205ENST00000486148 SETBP1Q9Y6X0 1596 aa22.91■■□□□ 1.26
TNXB-205ENST00000486148 TRAK1Q9UPV9 953 aa22.9■■□□□ 1.26
TNXB-205ENST00000486148 FRMPD1Q5SYB0 1578 aa22.9■■□□□ 1.26
TNXB-205ENST00000486148 DMRT2Q9Y5R5 561 aa22.9■■□□□ 1.26
TNXB-205ENST00000486148 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.89■■□□□ 1.26
TNXB-205ENST00000486148 GGT6Q6P531 493 aa22.89■■□□□ 1.25
TNXB-205ENST00000486148 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.25
TNXB-205ENST00000486148 PPLO60437 1756 aa22.88■■□□□ 1.25
TNXB-205ENST00000486148 CENPQQ7L2Z9 268 aaPredicted RBP22.88■■□□□ 1.25
TNXB-205ENST00000486148 POGZQ7Z3K3 1410 aa22.88■■□□□ 1.25
TNXB-205ENST00000486148 UBE2Q2Q8WVN8 375 aa22.87■■□□□ 1.25
TNXB-205ENST00000486148 C14orf93Q9H972 538 aaKnown RBP22.87■■□□□ 1.25
TNXB-205ENST00000486148 NSD3Q9BZ95 1437 aa22.86■■□□□ 1.25
TNXB-205ENST00000486148 TMEM132EQ6IEE7 984 aa22.86■■□□□ 1.25
TNXB-205ENST00000486148 ZC3H13Q5T200 1668 aaKnown RBP22.86■■□□□ 1.25
TNXB-205ENST00000486148 BCAR3O75815 825 aa22.85■■□□□ 1.25
TNXB-205ENST00000486148 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
TNXB-205ENST00000486148 CD109Q6YHK3 1445 aa22.85■■□□□ 1.25
TNXB-205ENST00000486148 ADGRB1O14514 1584 aa22.85■■□□□ 1.25
TNXB-205ENST00000486148 E9PSI1 815 aa22.85■■□□□ 1.25
TNXB-205ENST00000486148 QRICH2Q9H0J4 1663 aa22.85■■□□□ 1.25
TNXB-205ENST00000486148 SLC12A5Q9H2X9 1139 aa22.85■■□□□ 1.25
TNXB-205ENST00000486148 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
TNXB-205ENST00000486148 NPM1P06748 294 aaKnown RBP eCLIP22.84■■□□□ 1.25
TNXB-205ENST00000486148 HECW2Q9P2P5 1572 aa22.82■■□□□ 1.24
TNXB-205ENST00000486148 TNNT2P45379 298 aaPredicted RBP22.82■■□□□ 1.24
TNXB-205ENST00000486148 MORC1Q86VD1 984 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms