RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 ABCC2Q92887 1545 aa16.26■□□□□ 0.19
SGSM3-213ENST00000485962 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
SGSM3-213ENST00000485962 EFCAB2Q5VUJ9 269 aa16.25■□□□□ 0.19
SGSM3-213ENST00000485962 RSPH6AQ9H0K4 717 aa16.25■□□□□ 0.19
SGSM3-213ENST00000485962 TCERG1O14776 1098 aaKnown RBP16.23■□□□□ 0.19
SGSM3-213ENST00000485962 BLMP54132 1417 aaPredicted RBP16.23■□□□□ 0.19
SGSM3-213ENST00000485962 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
SGSM3-213ENST00000485962 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
SGSM3-213ENST00000485962 ATP10AO60312 1499 aa16.22■□□□□ 0.19
SGSM3-213ENST00000485962 SHROOM2Q13796 1616 aa16.22■□□□□ 0.19
SGSM3-213ENST00000485962 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
SGSM3-213ENST00000485962 PLCH2O75038 1416 aa16.21■□□□□ 0.19
SGSM3-213ENST00000485962 ADAMTS8Q9UP79 889 aa16.21■□□□□ 0.19
SGSM3-213ENST00000485962 WDR43Q15061 677 aaKnown RBP eCLIP16.2■□□□□ 0.185e-9■■■■■ 55.5
SGSM3-213ENST00000485962 RNF17Q9BXT8 1623 aaKnown RBP16.2■□□□□ 0.18
SGSM3-213ENST00000485962 TRAPPC8Q9Y2L5 1435 aa16.2■□□□□ 0.18
SGSM3-213ENST00000485962 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
SGSM3-213ENST00000485962 PDE4AP27815 886 aa16.19■□□□□ 0.18
SGSM3-213ENST00000485962 C14orf37Q86TY3 774 aa16.19■□□□□ 0.18
SGSM3-213ENST00000485962 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
SGSM3-213ENST00000485962 INSRP06213 1382 aa16.17■□□□□ 0.18
SGSM3-213ENST00000485962 ZMYM4Q5VZL5 1548 aa16.17■□□□□ 0.18
SGSM3-213ENST00000485962 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
SGSM3-213ENST00000485962 ABCC1P33527 1531 aa16.17■□□□□ 0.18
SGSM3-213ENST00000485962 BRD2P25440 801 aaKnown RBP16.17■□□□□ 0.18
SGSM3-213ENST00000485962 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
SGSM3-213ENST00000485962 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
SGSM3-213ENST00000485962 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
SGSM3-213ENST00000485962 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
SGSM3-213ENST00000485962 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
SGSM3-213ENST00000485962 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
SGSM3-213ENST00000485962 MS4A1P11836 297 aa16.14■□□□□ 0.17
SGSM3-213ENST00000485962 BACH2Q9BYV9 841 aa16.14■□□□□ 0.17
SGSM3-213ENST00000485962 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
SGSM3-213ENST00000485962 SKAP1Q86WV1 359 aa16.14■□□□□ 0.17
SGSM3-213ENST00000485962 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
SGSM3-213ENST00000485962 C20orf194Q5TEA3 1177 aa16.13■□□□□ 0.17
SGSM3-213ENST00000485962 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
SGSM3-213ENST00000485962 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
SGSM3-213ENST00000485962 CEP152O94986 1710 aa16.12■□□□□ 0.17
SGSM3-213ENST00000485962 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
SGSM3-213ENST00000485962 TRPM2O94759 1503 aa16.11■□□□□ 0.17
SGSM3-213ENST00000485962 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
SGSM3-213ENST00000485962 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
SGSM3-213ENST00000485962 SYNMO15061 1565 aa16.1■□□□□ 0.17
SGSM3-213ENST00000485962 EIF3AQ14152 1382 aaKnown RBP16.09■□□□□ 0.17
SGSM3-213ENST00000485962 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
SGSM3-213ENST00000485962 KANK1Q14678 1352 aa16.09■□□□□ 0.17
SGSM3-213ENST00000485962 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
SGSM3-213ENST00000485962 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
SGSM3-213ENST00000485962 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
SGSM3-213ENST00000485962 ASXL1Q8IXJ9 1541 aa16.09■□□□□ 0.17
SGSM3-213ENST00000485962 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.17
SGSM3-213ENST00000485962 KIF3BO15066 747 aa16.08■□□□□ 0.17
SGSM3-213ENST00000485962 STAC3Q96MF2 364 aa16.08■□□□□ 0.16
SGSM3-213ENST00000485962 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
SGSM3-213ENST00000485962 RTEL1-TNFRSF6BF6WH68 1400 aa16.07■□□□□ 0.16
SGSM3-213ENST00000485962 SCAPERQ9BY12 1400 aa16.07■□□□□ 0.16
SGSM3-213ENST00000485962 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
SGSM3-213ENST00000485962 PTPRTO14522 1441 aa16.06■□□□□ 0.16
SGSM3-213ENST00000485962 CHMP4BQ9H444 224 aaKnown RBP16.05■□□□□ 0.16
SGSM3-213ENST00000485962 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
SGSM3-213ENST00000485962 TET3O43151 1660 aa16.05■□□□□ 0.16
SGSM3-213ENST00000485962 CFAP70Q5T0N1 1121 aa16.05■□□□□ 0.16
SGSM3-213ENST00000485962 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
SGSM3-213ENST00000485962 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
SGSM3-213ENST00000485962 PIK3C2GO75747 1445 aa16.04■□□□□ 0.16
SGSM3-213ENST00000485962 MYOM1P52179 1685 aa16.04■□□□□ 0.16
SGSM3-213ENST00000485962 ZNF521Q96K83 1311 aa16.03■□□□□ 0.16
SGSM3-213ENST00000485962 APAF1O14727 1248 aa16.03■□□□□ 0.16
SGSM3-213ENST00000485962 DEPDC5O75140 1603 aa16.03■□□□□ 0.16
SGSM3-213ENST00000485962 CENPQQ7L2Z9 268 aaPredicted RBP16.02■□□□□ 0.16
SGSM3-213ENST00000485962 ATP7AQ04656 1500 aa16.02■□□□□ 0.16
SGSM3-213ENST00000485962 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
SGSM3-213ENST00000485962 NEFMP07197 916 aa16.01■□□□□ 0.15
SGSM3-213ENST00000485962 FANCAO15360 1455 aa16.01■□□□□ 0.15
SGSM3-213ENST00000485962 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
SGSM3-213ENST00000485962 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
SGSM3-213ENST00000485962 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
SGSM3-213ENST00000485962 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
SGSM3-213ENST00000485962 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
SGSM3-213ENST00000485962 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
SGSM3-213ENST00000485962 ARAP3Q8WWN8 1544 aa15.99■□□□□ 0.15
SGSM3-213ENST00000485962 CHGAP10645 457 aaKnown RBP15.99■□□□□ 0.15
SGSM3-213ENST00000485962 KIAA1210Q9ULL0 1709 aa15.99■□□□□ 0.15
SGSM3-213ENST00000485962 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
SGSM3-213ENST00000485962 KIF1BO60333 1816 aa15.98■□□□□ 0.15
SGSM3-213ENST00000485962 RGS3P49796 1198 aa15.98■□□□□ 0.15
SGSM3-213ENST00000485962 ADGRL1O94910 1474 aa15.97■□□□□ 0.15
SGSM3-213ENST00000485962 INO80Q9ULG1 1556 aaPredicted RBP15.97■□□□□ 0.15
SGSM3-213ENST00000485962 MAP3K4Q9Y6R4 1608 aa15.97■□□□□ 0.15
SGSM3-213ENST00000485962 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
SGSM3-213ENST00000485962 ABCA6Q8N139 1617 aa15.97■□□□□ 0.15
SGSM3-213ENST00000485962 TAOK2Q9UL54 1235 aa15.96■□□□□ 0.15
SGSM3-213ENST00000485962 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
SGSM3-213ENST00000485962 BCAR3O75815 825 aa15.96■□□□□ 0.15
SGSM3-213ENST00000485962 CARD14Q9BXL6 1004 aa15.96■□□□□ 0.15
SGSM3-213ENST00000485962 PPM1GO15355 546 aaPredicted RBP15.96■□□□□ 0.14
SGSM3-213ENST00000485962 E9PSI1 815 aa15.95■□□□□ 0.14
SGSM3-213ENST00000485962 NPM1P06748 294 aaKnown RBP eCLIP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms