RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 TRPM2O94759 1503 aa29.54■■■□□ 2.32
CLN5-202ENST00000485938 SCAF11Q99590 1463 aaKnown RBP29.54■■■□□ 2.32
CLN5-202ENST00000485938 USP35Q9P2H5 1018 aa29.53■■■□□ 2.32
CLN5-202ENST00000485938 SCAPERQ9BY12 1400 aa29.53■■■□□ 2.32
CLN5-202ENST00000485938 CDCA8Q53HL2 280 aa29.53■■■□□ 2.32
CLN5-202ENST00000485938 ASXL1Q8IXJ9 1541 aa29.52■■■□□ 2.32
CLN5-202ENST00000485938 EFCAB2Q5VUJ9 269 aa29.52■■■□□ 2.32
CLN5-202ENST00000485938 PIK3C2GO75747 1445 aa29.51■■■□□ 2.32
CLN5-202ENST00000485938 TRAPPC8Q9Y2L5 1435 aa29.51■■■□□ 2.32
CLN5-202ENST00000485938 CEP152O94986 1710 aa29.51■■■□□ 2.31
CLN5-202ENST00000485938 GOLGA2Q08379 1002 aa29.5■■■□□ 2.31
CLN5-202ENST00000485938 CENPQQ7L2Z9 268 aaPredicted RBP29.5■■■□□ 2.31
CLN5-202ENST00000485938 MYOM1P52179 1685 aa29.5■■■□□ 2.31
CLN5-202ENST00000485938 NEFMP07197 916 aa29.49■■■□□ 2.31
CLN5-202ENST00000485938 DDRGK1Q96HY6 314 aa29.49■■■□□ 2.31
CLN5-202ENST00000485938 PTPRTO14522 1441 aa29.48■■■□□ 2.31
CLN5-202ENST00000485938 STAC3Q96MF2 364 aa29.48■■■□□ 2.31
CLN5-202ENST00000485938 PPM1GO15355 546 aaPredicted RBP29.48■■■□□ 2.31
CLN5-202ENST00000485938 NPC1L1Q9UHC9 1359 aa29.47■■■□□ 2.31
CLN5-202ENST00000485938 CLTCL1P53675 1640 aa29.47■■■□□ 2.31
CLN5-202ENST00000485938 SLFN5Q08AF3 891 aa29.44■■■□□ 2.3
CLN5-202ENST00000485938 ZCCHC11Q5TAX3 1644 aaKnown RBP29.44■■■□□ 2.3
CLN5-202ENST00000485938 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.43■■■□□ 2.3
CLN5-202ENST00000485938 TRMT2AQ8IZ69 625 aaKnown RBP29.42■■■□□ 2.3
CLN5-202ENST00000485938 RTEL1-TNFRSF6BF6WH68 1400 aa29.41■■■□□ 2.3
CLN5-202ENST00000485938 DEPDC5O75140 1603 aa29.4■■■□□ 2.3
CLN5-202ENST00000485938 SPAG9O60271 1321 aaKnown RBP29.4■■■□□ 2.3
CLN5-202ENST00000485938 ZFYVE16Q7Z3T8 1539 aa29.4■■■□□ 2.3
CLN5-202ENST00000485938 EIF3AQ14152 1382 aaKnown RBP29.39■■■□□ 2.3
CLN5-202ENST00000485938 KIAA1210Q9ULL0 1709 aa29.39■■■□□ 2.29
CLN5-202ENST00000485938 KDM5AP29375 1690 aaKnown RBP29.38■■■□□ 2.29
CLN5-202ENST00000485938 TET3O43151 1660 aa29.37■■■□□ 2.29
CLN5-202ENST00000485938 FAM161AQ3B820 660 aa29.35■■■□□ 2.29
CLN5-202ENST00000485938 CCDC146Q8IYE0 955 aa29.35■■■□□ 2.29
CLN5-202ENST00000485938 UHRF1BP1LA0JNW5 1464 aa29.34■■■□□ 2.29
CLN5-202ENST00000485938 C8orf34Q49A92 452 aa29.34■■■□□ 2.29
CLN5-202ENST00000485938 AFAP1Q8N556 730 aa29.33■■■□□ 2.29
CLN5-202ENST00000485938 NKTRP30414 1462 aaKnown RBP29.33■■■□□ 2.29
CLN5-202ENST00000485938 SPINK5Q9NQ38 1064 aaPredicted RBP29.32■■■□□ 2.28
CLN5-202ENST00000485938 NEURL4Q96JN8 1562 aa29.31■■■□□ 2.28
CLN5-202ENST00000485938 ARAP3Q8WWN8 1544 aa29.31■■■□□ 2.28
CLN5-202ENST00000485938 VWDEQ8N2E2 1590 aa29.31■■■□□ 2.28
CLN5-202ENST00000485938 APAF1O14727 1248 aa29.31■■■□□ 2.28
CLN5-202ENST00000485938 ERVK-7P63135 1459 aa29.29■■■□□ 2.28
CLN5-202ENST00000485938 E9PSI1 815 aa29.26■■■□□ 2.27
CLN5-202ENST00000485938 KANK1Q14678 1352 aa29.25■■■□□ 2.27
CLN5-202ENST00000485938 MAP3K4Q9Y6R4 1608 aa29.25■■■□□ 2.27
CLN5-202ENST00000485938 MYOM2P54296 1465 aa29.25■■■□□ 2.27
CLN5-202ENST00000485938 ABCA6Q8N139 1617 aa29.25■■■□□ 2.27
CLN5-202ENST00000485938 SLC24A1O60721 1099 aa29.25■■■□□ 2.27
CLN5-202ENST00000485938 SLC4A3P48751 1232 aa29.25■■■□□ 2.27
CLN5-202ENST00000485938 BCAR3O75815 825 aa29.24■■■□□ 2.27
CLN5-202ENST00000485938 NGEFQ8N5V2 710 aa29.23■■■□□ 2.27
CLN5-202ENST00000485938 CARD14Q9BXL6 1004 aa29.23■■■□□ 2.27
CLN5-202ENST00000485938 INO80Q9ULG1 1556 aaPredicted RBP29.23■■■□□ 2.27
CLN5-202ENST00000485938 CFAP70Q5T0N1 1121 aa29.22■■■□□ 2.27
CLN5-202ENST00000485938 ATP7AQ04656 1500 aa29.22■■■□□ 2.27
CLN5-202ENST00000485938 RGS3P49796 1198 aa29.21■■■□□ 2.27
CLN5-202ENST00000485938 NFKBIBQ15653 356 aa29.21■■■□□ 2.27
CLN5-202ENST00000485938 DAXXQ9UER7 740 aaPredicted RBP29.2■■■□□ 2.27
CLN5-202ENST00000485938 DMRT2Q9Y5R5 561 aa29.2■■■□□ 2.27
CLN5-202ENST00000485938 IL27Q8NEV9 243 aa29.18■■■□□ 2.26
CLN5-202ENST00000485938 UGGT1Q9NYU2 1555 aa29.18■■■□□ 2.26
CLN5-202ENST00000485938 ADGRF5Q8IZF2 1346 aa29.18■■■□□ 2.26
CLN5-202ENST00000485938 MROH1Q8NDA8 1641 aa29.16■■■□□ 2.26
CLN5-202ENST00000485938 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
CLN5-202ENST00000485938 IFT172Q9UG01 1749 aa29.16■■■□□ 2.26
CLN5-202ENST00000485938 KIF3BO15066 747 aa29.15■■■□□ 2.26
CLN5-202ENST00000485938 POLR3AO14802 1390 aaPredicted RBP29.15■■■□□ 2.26
CLN5-202ENST00000485938 MYO3AQ8NEV4 1616 aa29.15■■■□□ 2.26
CLN5-202ENST00000485938 KIF1BO60333 1816 aa29.14■■■□□ 2.26
CLN5-202ENST00000485938 PDE3AQ14432 1141 aa29.14■■■□□ 2.25
CLN5-202ENST00000485938 ABCA9Q8IUA7 1624 aa29.13■■■□□ 2.25
CLN5-202ENST00000485938 CGNL1Q0VF96 1302 aa29.13■■■□□ 2.25
CLN5-202ENST00000485938 SBNO2Q9Y2G9 1366 aa29.13■■■□□ 2.25
CLN5-202ENST00000485938 IGHDP01880 384 aa29.12■■■□□ 2.25
CLN5-202ENST00000485938 GSE1Q14687 1217 aa29.12■■■□□ 2.25
CLN5-202ENST00000485938 VIRMAQ69YN4 1812 aaKnown RBP29.12■■■□□ 2.25
CLN5-202ENST00000485938 NINLQ9Y2I6 1382 aa29.12■■■□□ 2.25
CLN5-202ENST00000485938 NRXN1Q9ULB1 1477 aa29.11■■■□□ 2.25
CLN5-202ENST00000485938 FANCAO15360 1455 aa29.11■■■□□ 2.25
CLN5-202ENST00000485938 WWC1Q8IX03 1113 aa29.1■■■□□ 2.25
CLN5-202ENST00000485938 CENPJQ9HC77 1338 aaPredicted RBP29.1■■■□□ 2.25
CLN5-202ENST00000485938 MROH2AA6NES4 1674 aa29.09■■■□□ 2.25
CLN5-202ENST00000485938 EFCAB6Q5THR3 1501 aa29.09■■■□□ 2.25
CLN5-202ENST00000485938 SHPRHQ149N8 1683 aa29.07■■■□□ 2.24
CLN5-202ENST00000485938 CLUAP1Q96AJ1 413 aa29.05■■■□□ 2.24
CLN5-202ENST00000485938 PANK1Q8TE04 598 aa29.03■■■□□ 2.24
CLN5-202ENST00000485938 USP19O94966 1318 aa29.03■■■□□ 2.24
CLN5-202ENST00000485938 ADGRL1O94910 1474 aa29.02■■■□□ 2.24
CLN5-202ENST00000485938 SETBP1Q9Y6X0 1596 aa29.02■■■□□ 2.24
CLN5-202ENST00000485938 PPRC1Q5VV67 1664 aaKnown RBP29.02■■■□□ 2.24
CLN5-202ENST00000485938 COG6Q9Y2V7 657 aa29.02■■■□□ 2.24
CLN5-202ENST00000485938 NSD3Q9BZ95 1437 aa29.02■■■□□ 2.24
CLN5-202ENST00000485938 MAPK8IP3Q9UPT6 1336 aa29.01■■■□□ 2.23
CLN5-202ENST00000485938 CANXP27824 592 aaKnown RBP29■■■□□ 2.23
CLN5-202ENST00000485938 ASXL2Q76L83 1435 aa29■■■□□ 2.23
CLN5-202ENST00000485938 FRAT1Q92837 279 aaPredicted RBP28.99■■■□□ 2.23
CLN5-202ENST00000485938 IQSEC2Q5JU85 1478 aa28.99■■■□□ 2.23
CLN5-202ENST00000485938 ADGRB3O60242 1522 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms