RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 PLEKHG1Q9ULL1 1385 aa20.85■□□□□ 0.93
SCAF4-206ENST00000485790 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
SCAF4-206ENST00000485790 KDM5AP29375 1690 aaKnown RBP20.83■□□□□ 0.93
SCAF4-206ENST00000485790 FAM135BQ49AJ0 1406 aa20.83■□□□□ 0.93
SCAF4-206ENST00000485790 SYNMO15061 1565 aa20.83■□□□□ 0.92
SCAF4-206ENST00000485790 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
SCAF4-206ENST00000485790 C14orf37Q86TY3 774 aa20.82■□□□□ 0.92
SCAF4-206ENST00000485790 SLAIN2Q9P270 581 aa20.82■□□□□ 0.92
SCAF4-206ENST00000485790 ADGRB3O60242 1522 aa20.82■□□□□ 0.92
SCAF4-206ENST00000485790 MSH6P52701 1360 aa20.81■□□□□ 0.92
SCAF4-206ENST00000485790 TET3O43151 1660 aa20.8■□□□□ 0.92
SCAF4-206ENST00000485790 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
SCAF4-206ENST00000485790 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
SCAF4-206ENST00000485790 STRCP1A6NGW2 1772 aa20.77■□□□□ 0.92
SCAF4-206ENST00000485790 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
SCAF4-206ENST00000485790 ATF3P18847 181 aa20.75■□□□□ 0.91
SCAF4-206ENST00000485790 C19orf44Q9H6X5 657 aa20.75■□□□□ 0.91
SCAF4-206ENST00000485790 NKTRP30414 1462 aaKnown RBP20.74■□□□□ 0.91
SCAF4-206ENST00000485790 PIK3R4Q99570 1358 aa20.73■□□□□ 0.91
SCAF4-206ENST00000485790 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
SCAF4-206ENST00000485790 CADPS2Q86UW7 1296 aa20.73■□□□□ 0.91
SCAF4-206ENST00000485790 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
SCAF4-206ENST00000485790 AMOTL2Q9Y2J4 779 aa20.73■□□□□ 0.91
SCAF4-206ENST00000485790 MED1Q15648 1581 aaPredicted RBP20.72■□□□□ 0.91
SCAF4-206ENST00000485790 UNC13BO14795 1591 aa20.72■□□□□ 0.91
SCAF4-206ENST00000485790 TMEM131LA2VDJ0 1609 aa20.69■□□□□ 0.9
SCAF4-206ENST00000485790 RRBP1Q9P2E9 1410 aaKnown RBP20.66■□□□□ 0.9
SCAF4-206ENST00000485790 IQGAP3Q86VI3 1631 aa20.66■□□□□ 0.9
SCAF4-206ENST00000485790 GCC2Q8IWJ2 1684 aa20.66■□□□□ 0.9
SCAF4-206ENST00000485790 ADAMTS13Q76LX8 1427 aa20.65■□□□□ 0.9
SCAF4-206ENST00000485790 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
SCAF4-206ENST00000485790 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
SCAF4-206ENST00000485790 E9PCH4 1651 aa20.63■□□□□ 0.89
SCAF4-206ENST00000485790 NWD1Q149M9 1564 aa20.62■□□□□ 0.89
SCAF4-206ENST00000485790 NAIPQ13075 1403 aa20.61■□□□□ 0.89
SCAF4-206ENST00000485790 RGS17Q9UGC6 210 aaPredicted RBP20.61■□□□□ 0.89
SCAF4-206ENST00000485790 JCADQ9P266 1359 aa20.6■□□□□ 0.89
SCAF4-206ENST00000485790 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.89
SCAF4-206ENST00000485790 DIP2AQ14689 1571 aa20.57■□□□□ 0.88
SCAF4-206ENST00000485790 XIRP1Q702N8 1843 aaKnown RBP20.57■□□□□ 0.88
SCAF4-206ENST00000485790 TRPM2O94759 1503 aa20.56■□□□□ 0.88
SCAF4-206ENST00000485790 MEX3CQ5U5Q3 659 aaKnown RBP20.55■□□□□ 0.88
SCAF4-206ENST00000485790 SPATA31A6Q5VVP1 1343 aa20.54■□□□□ 0.88
SCAF4-206ENST00000485790 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
SCAF4-206ENST00000485790 METP08581 1390 aa20.54■□□□□ 0.88
SCAF4-206ENST00000485790 ROBO1Q9Y6N7 1651 aa20.54■□□□□ 0.88
SCAF4-206ENST00000485790 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
SCAF4-206ENST00000485790 CHD2O14647 1828 aaKnown RBP20.53■□□□□ 0.88
SCAF4-206ENST00000485790 POTEAQ6S8J7 498 aa20.53■□□□□ 0.88
SCAF4-206ENST00000485790 BRINP3Q76B58 766 aa20.53■□□□□ 0.88
SCAF4-206ENST00000485790 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
SCAF4-206ENST00000485790 LRRC59Q96AG4 307 aaKnown RBP20.5■□□□□ 0.87
SCAF4-206ENST00000485790 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
SCAF4-206ENST00000485790 DCCP43146 1447 aa20.48■□□□□ 0.87
SCAF4-206ENST00000485790 ZNF772Q68DY9 489 aaPredicted RBP20.48■□□□□ 0.87
SCAF4-206ENST00000485790 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
SCAF4-206ENST00000485790 SETBP1Q9Y6X0 1596 aa20.46■□□□□ 0.87
SCAF4-206ENST00000485790 NUTM2BA6NNL0 878 aaPredicted RBP20.45■□□□□ 0.86
SCAF4-206ENST00000485790 NUTM2EB1AL46 878 aaPredicted RBP20.45■□□□□ 0.86
SCAF4-206ENST00000485790 FOXD1Q16676 465 aa20.45■□□□□ 0.86
SCAF4-206ENST00000485790 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
SCAF4-206ENST00000485790 NUTM2AQ8IVF1 878 aaPredicted RBP20.45■□□□□ 0.86
SCAF4-206ENST00000485790 SPHKAPQ2M3C7 1700 aa20.43■□□□□ 0.86
SCAF4-206ENST00000485790 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
SCAF4-206ENST00000485790 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.4■□□□□ 0.86
SCAF4-206ENST00000485790 CCDC144AA2RUR9 1427 aa20.39■□□□□ 0.85
SCAF4-206ENST00000485790 ADGRL3Q9HAR2 1447 aa20.39■□□□□ 0.85
SCAF4-206ENST00000485790 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
SCAF4-206ENST00000485790 NEXMIFQ5QGS0 1516 aa20.38■□□□□ 0.85
SCAF4-206ENST00000485790 MST1RQ04912 1400 aa20.38■□□□□ 0.85
SCAF4-206ENST00000485790 RXRBP28702 533 aa20.38■□□□□ 0.85
SCAF4-206ENST00000485790 STK26Q9P289 416 aa20.36■□□□□ 0.85
SCAF4-206ENST00000485790 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
SCAF4-206ENST00000485790 ANKRD30BQ9BXX2 1392 aa20.35■□□□□ 0.85
SCAF4-206ENST00000485790 ROBO2Q9HCK4 1378 aa20.35■□□□□ 0.85
SCAF4-206ENST00000485790 AHDC1Q5TGY3 1603 aaPredicted RBP20.35■□□□□ 0.85
SCAF4-206ENST00000485790 DDX17Q92841 729 aaKnown RBP20.35■□□□□ 0.85
SCAF4-206ENST00000485790 ADGRF5Q8IZF2 1346 aa20.34■□□□□ 0.85
SCAF4-206ENST00000485790 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
SCAF4-206ENST00000485790 COL16A1Q07092 1604 aaPredicted RBP20.34■□□□□ 0.85
SCAF4-206ENST00000485790 NRXN3Q9Y4C0 1643 aa20.34■□□□□ 0.85
SCAF4-206ENST00000485790 ESCO1Q5FWF5 840 aa20.33■□□□□ 0.85
SCAF4-206ENST00000485790 PTCH1Q13635 1447 aa20.33■□□□□ 0.84
SCAF4-206ENST00000485790 ASXL1Q8IXJ9 1541 aa20.32■□□□□ 0.84
SCAF4-206ENST00000485790 C1orf167Q5SNV9 1468 aa20.31■□□□□ 0.84
SCAF4-206ENST00000485790 XRN1Q8IZH2 1706 aaKnown RBP20.31■□□□□ 0.84
SCAF4-206ENST00000485790 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
SCAF4-206ENST00000485790 C8orf37Q96NL8 207 aa20.31■□□□□ 0.84
SCAF4-206ENST00000485790 KIF1BO60333 1816 aa20.31■□□□□ 0.84
SCAF4-206ENST00000485790 QTRT2Q9H974 415 aaKnown RBP20.3■□□□□ 0.84
SCAF4-206ENST00000485790 AFF2P51816 1311 aa20.29■□□□□ 0.84
SCAF4-206ENST00000485790 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
SCAF4-206ENST00000485790 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
SCAF4-206ENST00000485790 ADAMTS2O95450 1211 aa20.28■□□□□ 0.84
SCAF4-206ENST00000485790 WAPLQ7Z5K2 1190 aa20.28■□□□□ 0.84
SCAF4-206ENST00000485790 SIRT1Q96EB6 747 aa20.28■□□□□ 0.84
SCAF4-206ENST00000485790 LRP6O75581 1613 aa20.27■□□□□ 0.84
SCAF4-206ENST00000485790 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.83
SCAF4-206ENST00000485790 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
SCAF4-206ENST00000485790 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms