RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
TRA2B-213ENST00000485530 ACIN1Q9UKV3 1341 aaKnown RBP18.12■□□□□ 0.49
TRA2B-213ENST00000485530 NOS1P29475 1434 aa18.12■□□□□ 0.49
TRA2B-213ENST00000485530 FAM135BQ49AJ0 1406 aa18.12■□□□□ 0.49
TRA2B-213ENST00000485530 E9PCH4 1651 aa18.11■□□□□ 0.49
TRA2B-213ENST00000485530 CFAP65Q6ZU64 1925 aaKnown RBP18.1■□□□□ 0.49
TRA2B-213ENST00000485530 IDI1Q13907 227 aa18.1■□□□□ 0.49
TRA2B-213ENST00000485530 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
TRA2B-213ENST00000485530 LTKP29376 864 aa18.09■□□□□ 0.49
TRA2B-213ENST00000485530 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
TRA2B-213ENST00000485530 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.48
TRA2B-213ENST00000485530 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
TRA2B-213ENST00000485530 TMEM94Q12767 1356 aa18.04■□□□□ 0.48
TRA2B-213ENST00000485530 PIK3C2BO00750 1634 aa18.03■□□□□ 0.48
TRA2B-213ENST00000485530 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
TRA2B-213ENST00000485530 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.47
TRA2B-213ENST00000485530 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
TRA2B-213ENST00000485530 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
TRA2B-213ENST00000485530 EID1Q9Y6B2 187 aa18■□□□□ 0.47
TRA2B-213ENST00000485530 NWD1Q149M9 1564 aa17.99■□□□□ 0.47
TRA2B-213ENST00000485530 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
TRA2B-213ENST00000485530 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
TRA2B-213ENST00000485530 PHLPP1O60346 1717 aa17.96■□□□□ 0.47
TRA2B-213ENST00000485530 TRPM2O94759 1503 aa17.95■□□□□ 0.46
TRA2B-213ENST00000485530 KCNA6P17658 529 aa17.95■□□□□ 0.46
TRA2B-213ENST00000485530 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
TRA2B-213ENST00000485530 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
TRA2B-213ENST00000485530 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
TRA2B-213ENST00000485530 RBM33Q96EV2 1170 aaKnown RBP17.93■□□□□ 0.46
TRA2B-213ENST00000485530 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
TRA2B-213ENST00000485530 JCADQ9P266 1359 aa17.92■□□□□ 0.46
TRA2B-213ENST00000485530 COL16A1Q07092 1604 aaPredicted RBP17.92■□□□□ 0.46
TRA2B-213ENST00000485530 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
TRA2B-213ENST00000485530 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
TRA2B-213ENST00000485530 SLC26A8Q96RN1 970 aa17.91■□□□□ 0.46
TRA2B-213ENST00000485530 MSH6P52701 1360 aa17.91■□□□□ 0.46
TRA2B-213ENST00000485530 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
TRA2B-213ENST00000485530 LRP6O75581 1613 aa17.9■□□□□ 0.46
TRA2B-213ENST00000485530 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
TRA2B-213ENST00000485530 CCDC144AA2RUR9 1427 aa17.89■□□□□ 0.46
TRA2B-213ENST00000485530 RGL3Q3MIN7 710 aa17.89■□□□□ 0.45
TRA2B-213ENST00000485530 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
TRA2B-213ENST00000485530 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
TRA2B-213ENST00000485530 UPF1Q92900 1129 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRA2B-213ENST00000485530 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
TRA2B-213ENST00000485530 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
TRA2B-213ENST00000485530 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
TRA2B-213ENST00000485530 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
TRA2B-213ENST00000485530 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.45
TRA2B-213ENST00000485530 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
TRA2B-213ENST00000485530 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
TRA2B-213ENST00000485530 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
TRA2B-213ENST00000485530 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
TRA2B-213ENST00000485530 AHDC1Q5TGY3 1603 aaPredicted RBP17.82■□□□□ 0.44
TRA2B-213ENST00000485530 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
TRA2B-213ENST00000485530 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
TRA2B-213ENST00000485530 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
TRA2B-213ENST00000485530 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
TRA2B-213ENST00000485530 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
TRA2B-213ENST00000485530 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRA2B-213ENST00000485530 KIF1BO60333 1816 aa17.77■□□□□ 0.44
TRA2B-213ENST00000485530 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
TRA2B-213ENST00000485530 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
TRA2B-213ENST00000485530 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
TRA2B-213ENST00000485530 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.44
TRA2B-213ENST00000485530 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.43
TRA2B-213ENST00000485530 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
TRA2B-213ENST00000485530 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
TRA2B-213ENST00000485530 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
TRA2B-213ENST00000485530 BCANQ96GW7 911 aa17.76■□□□□ 0.43
TRA2B-213ENST00000485530 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
TRA2B-213ENST00000485530 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
TRA2B-213ENST00000485530 KDM2AQ9Y2K7 1162 aa17.75■□□□□ 0.43
TRA2B-213ENST00000485530 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
TRA2B-213ENST00000485530 SRCAPQ6ZRS2 3230 aa17.73■□□□□ 0.43
TRA2B-213ENST00000485530 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
TRA2B-213ENST00000485530 RXRBP28702 533 aa17.72■□□□□ 0.43
TRA2B-213ENST00000485530 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
TRA2B-213ENST00000485530 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
TRA2B-213ENST00000485530 C14orf37Q86TY3 774 aa17.69■□□□□ 0.42
TRA2B-213ENST00000485530 TBX22Q9Y458 520 aa17.69■□□□□ 0.42
TRA2B-213ENST00000485530 PPLO60437 1756 aa17.68■□□□□ 0.42
TRA2B-213ENST00000485530 RGS12O14924 1447 aa17.67■□□□□ 0.42
TRA2B-213ENST00000485530 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
TRA2B-213ENST00000485530 C19orf44Q9H6X5 657 aa17.67■□□□□ 0.42
TRA2B-213ENST00000485530 ATF3P18847 181 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 IFT172Q9UG01 1749 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 ASXL1Q8IXJ9 1541 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 AFF2P51816 1311 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 METP08581 1390 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
TRA2B-213ENST00000485530 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
TRA2B-213ENST00000485530 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
TRA2B-213ENST00000485530 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
TRA2B-213ENST00000485530 NHSL1Q5SYE7 1610 aa17.65■□□□□ 0.42
TRA2B-213ENST00000485530 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
TRA2B-213ENST00000485530 DCCP43146 1447 aa17.64■□□□□ 0.42
TRA2B-213ENST00000485530 MYOM2P54296 1465 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms