RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 LTKP29376 864 aa10.35□□□□□ -0.75
CAPN13-206ENST00000485248 ERVK-7P63135 1459 aa10.35□□□□□ -0.75
CAPN13-206ENST00000485248 ATF3P18847 181 aa10.34□□□□□ -0.75
CAPN13-206ENST00000485248 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
CAPN13-206ENST00000485248 NCOA2Q15596 1464 aa10.34□□□□□ -0.75
CAPN13-206ENST00000485248 ARHGAP23Q9P227 1491 aa10.34□□□□□ -0.75
CAPN13-206ENST00000485248 GPATCH8Q9UKJ3 1502 aaKnown RBP10.33□□□□□ -0.76
CAPN13-206ENST00000485248 SENP3-EIF4A1A0A087X0R7 540 aa10.33□□□□□ -0.76
CAPN13-206ENST00000485248 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
CAPN13-206ENST00000485248 EEA1Q15075 1411 aa10.33□□□□□ -0.76
CAPN13-206ENST00000485248 SLC26A8Q96RN1 970 aa10.32□□□□□ -0.76
CAPN13-206ENST00000485248 TRPC5Q9UL62 973 aaPredicted RBP10.32□□□□□ -0.76
CAPN13-206ENST00000485248 NHSL1Q5SYE7 1610 aa10.32□□□□□ -0.76
CAPN13-206ENST00000485248 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
CAPN13-206ENST00000485248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.76
CAPN13-206ENST00000485248 USP21Q9UK80 565 aa10.3□□□□□ -0.76
CAPN13-206ENST00000485248 CFAP65Q6ZU64 1925 aaKnown RBP10.3□□□□□ -0.76
CAPN13-206ENST00000485248 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
CAPN13-206ENST00000485248 TMEM2Q9UHN6 1383 aa10.29□□□□□ -0.76
CAPN13-206ENST00000485248 LRRC59Q96AG4 307 aaKnown RBP10.29□□□□□ -0.76
CAPN13-206ENST00000485248 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
CAPN13-206ENST00000485248 ARHGAP35Q9NRY4 1499 aa10.29□□□□□ -0.76
CAPN13-206ENST00000485248 ADAMTS2O95450 1211 aa10.28□□□□□ -0.76
CAPN13-206ENST00000485248 NCOA3Q9Y6Q9 1424 aa10.27□□□□□ -0.77
CAPN13-206ENST00000485248 PIK3C2BO00750 1634 aa10.27□□□□□ -0.77
CAPN13-206ENST00000485248 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
CAPN13-206ENST00000485248 EFCAB6Q5THR3 1501 aa10.27□□□□□ -0.77
CAPN13-206ENST00000485248 CCDC141Q6ZP82 1450 aa10.26□□□□□ -0.77
CAPN13-206ENST00000485248 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
CAPN13-206ENST00000485248 CEP152O94986 1710 aa10.26□□□□□ -0.77
CAPN13-206ENST00000485248 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
CAPN13-206ENST00000485248 SETD5Q9C0A6 1442 aa10.25□□□□□ -0.77
CAPN13-206ENST00000485248 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.25□□□□□ -0.77
CAPN13-206ENST00000485248 PPP1R15AO75807 674 aaPredicted RBP10.25□□□□□ -0.77
CAPN13-206ENST00000485248 MROH1Q8NDA8 1641 aa10.25□□□□□ -0.77
CAPN13-206ENST00000485248 CAMSAP2Q08AD1 1489 aa10.24□□□□□ -0.77
CAPN13-206ENST00000485248 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
CAPN13-206ENST00000485248 HRCP23327 699 aa10.24□□□□□ -0.77
CAPN13-206ENST00000485248 C19orf44Q9H6X5 657 aa10.24□□□□□ -0.77
CAPN13-206ENST00000485248 TSPY4P0CV99 314 aa10.23□□□□□ -0.77
CAPN13-206ENST00000485248 TSPY10P0CW01 314 aa10.23□□□□□ -0.77
CAPN13-206ENST00000485248 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
CAPN13-206ENST00000485248 BRINP3Q76B58 766 aa10.23□□□□□ -0.77
CAPN13-206ENST00000485248 DEFB132Q7Z7B7 95 aa10.23□□□□□ -0.77
CAPN13-206ENST00000485248 CHD2O14647 1828 aaKnown RBP10.23□□□□□ -0.77
CAPN13-206ENST00000485248 ASXL1Q8IXJ9 1541 aa10.23□□□□□ -0.77
CAPN13-206ENST00000485248 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
CAPN13-206ENST00000485248 TET3O43151 1660 aa10.22□□□□□ -0.77
CAPN13-206ENST00000485248 MSH5O43196 834 aa10.22□□□□□ -0.77
CAPN13-206ENST00000485248 BAG6P46379 1132 aa10.22□□□□□ -0.77
CAPN13-206ENST00000485248 MTUS2Q5JR59 1369 aa10.22□□□□□ -0.77
CAPN13-206ENST00000485248 PNPLA6Q8IY17 1366 aa10.22□□□□□ -0.77
CAPN13-206ENST00000485248 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.77
CAPN13-206ENST00000485248 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
CAPN13-206ENST00000485248 MBD5Q9P267 1494 aa10.21□□□□□ -0.78
CAPN13-206ENST00000485248 UNC13BO14795 1591 aa10.21□□□□□ -0.78
CAPN13-206ENST00000485248 MAST1Q9Y2H9 1570 aa10.21□□□□□ -0.78
CAPN13-206ENST00000485248 ZNF644Q9H582 1327 aaPredicted RBP10.2□□□□□ -0.78
CAPN13-206ENST00000485248 ATRNO75882 1429 aa10.19□□□□□ -0.78
CAPN13-206ENST00000485248 PPP1R1BQ9UD71 204 aaPredicted RBP10.19□□□□□ -0.78
CAPN13-206ENST00000485248 PTCH1Q13635 1447 aa10.18□□□□□ -0.78
CAPN13-206ENST00000485248 MYCNP04198 464 aaPredicted RBP10.17□□□□□ -0.78
CAPN13-206ENST00000485248 ADGRB3O60242 1522 aa10.17□□□□□ -0.78
CAPN13-206ENST00000485248 DCCP43146 1447 aa10.16□□□□□ -0.78
CAPN13-206ENST00000485248 EP400Q96L91 3159 aa10.16□□□□□ -0.78
CAPN13-206ENST00000485248 SPHKAPQ2M3C7 1700 aa10.16□□□□□ -0.78
CAPN13-206ENST00000485248 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
CAPN13-206ENST00000485248 GJD4Q96KN9 370 aaPredicted RBP10.16□□□□□ -0.78
CAPN13-206ENST00000485248 ARHGAP31Q2M1Z3 1444 aa10.16□□□□□ -0.78
CAPN13-206ENST00000485248 KANK1Q14678 1352 aa10.15□□□□□ -0.78
CAPN13-206ENST00000485248 R3HDM1Q15032 1099 aaKnown RBP10.15□□□□□ -0.78
CAPN13-206ENST00000485248 BCL9LQ86UU0 1499 aa10.15□□□□□ -0.78
CAPN13-206ENST00000485248 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
CAPN13-206ENST00000485248 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
CAPN13-206ENST00000485248 A0A0G2JS52 829 aa10.13□□□□□ -0.79
CAPN13-206ENST00000485248 HOXD11P31277 338 aaPredicted RBP10.13□□□□□ -0.79
CAPN13-206ENST00000485248 MYT1Q01538 1121 aa10.13□□□□□ -0.79
CAPN13-206ENST00000485248 EHBP1L1Q8N3D4 1523 aa10.12□□□□□ -0.79
CAPN13-206ENST00000485248 RPRD2Q5VT52 1461 aaKnown RBP10.12□□□□□ -0.79
CAPN13-206ENST00000485248 IDI1Q13907 227 aa10.12□□□□□ -0.79
CAPN13-206ENST00000485248 ARHGEF5Q12774 1597 aa10.12□□□□□ -0.79
CAPN13-206ENST00000485248 ZNF784Q8NCA9 323 aaPredicted RBP10.11□□□□□ -0.79
CAPN13-206ENST00000485248 TBX22Q9Y458 520 aa10.11□□□□□ -0.79
CAPN13-206ENST00000485248 TRPM2O94759 1503 aa10.11□□□□□ -0.79
CAPN13-206ENST00000485248 PIK3R4Q99570 1358 aa10.11□□□□□ -0.79
CAPN13-206ENST00000485248 MST1RQ04912 1400 aa10.1□□□□□ -0.79
CAPN13-206ENST00000485248 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.1□□□□□ -0.79
CAPN13-206ENST00000485248 DDX17Q92841 729 aaKnown RBP10.1□□□□□ -0.79
CAPN13-206ENST00000485248 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
CAPN13-206ENST00000485248 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.1□□□□□ -0.79
CAPN13-206ENST00000485248 MARF1Q9Y4F3 1742 aaKnown RBP10.1□□□□□ -0.79
CAPN13-206ENST00000485248 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
CAPN13-206ENST00000485248 DUOX2Q9NRD8 1548 aa10.09□□□□□ -0.79
CAPN13-206ENST00000485248 KRT27Q7Z3Y8 459 aa10.09□□□□□ -0.79
CAPN13-206ENST00000485248 RGPD1P0DJD0 1748 aa10.09□□□□□ -0.79
CAPN13-206ENST00000485248 RIMS2Q9UQ26 1411 aa10.08□□□□□ -0.8
CAPN13-206ENST00000485248 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
CAPN13-206ENST00000485248 SLC52A1Q9NWF4 448 aa10.08□□□□□ -0.8
CAPN13-206ENST00000485248 NINLQ9Y2I6 1382 aa10.08□□□□□ -0.8
CAPN13-206ENST00000485248 RALGAPBQ86X10 1494 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms