RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 SYNMO15061 1565 aa11.65□□□□□ -0.54
MACF1-220ENST00000485063 NCKAP5LQ9HCH0 1330 aa11.64□□□□□ -0.55
MACF1-220ENST00000485063 SETD5Q9C0A6 1442 aa11.64□□□□□ -0.55
MACF1-220ENST00000485063 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
MACF1-220ENST00000485063 IDI1Q13907 227 aa11.63□□□□□ -0.55
MACF1-220ENST00000485063 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
MACF1-220ENST00000485063 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
MACF1-220ENST00000485063 ADGRB3O60242 1522 aa11.61□□□□□ -0.55
MACF1-220ENST00000485063 CHGAP10645 457 aaKnown RBP11.61□□□□□ -0.55
MACF1-220ENST00000485063 HDGFP51858 240 aaKnown RBP11.61□□□□□ -0.55
MACF1-220ENST00000485063 POLA2Q14181 598 aa11.6□□□□□ -0.55
MACF1-220ENST00000485063 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
MACF1-220ENST00000485063 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
MACF1-220ENST00000485063 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
MACF1-220ENST00000485063 SLIT1O75093 1534 aa11.59□□□□□ -0.55
MACF1-220ENST00000485063 KIF1BO60333 1816 aa11.58□□□□□ -0.56
MACF1-220ENST00000485063 SCAF11Q99590 1463 aaKnown RBP11.58□□□□□ -0.56
MACF1-220ENST00000485063 RAB3GAP2Q9H2M9 1393 aa11.58□□□□□ -0.56
MACF1-220ENST00000485063 NPHP4O75161 1426 aaPredicted RBP11.58□□□□□ -0.56
MACF1-220ENST00000485063 IQGAP1P46940 1657 aa11.58□□□□□ -0.56
MACF1-220ENST00000485063 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.56
MACF1-220ENST00000485063 ARHGAP23Q9P227 1491 aa11.57□□□□□ -0.56
MACF1-220ENST00000485063 TMEM131LA2VDJ0 1609 aa11.57□□□□□ -0.56
MACF1-220ENST00000485063 TMEM2Q9UHN6 1383 aa11.57□□□□□ -0.56
MACF1-220ENST00000485063 MPHOSPH9Q99550 1183 aa11.57□□□□□ -0.56
MACF1-220ENST00000485063 MED14O60244 1454 aa11.57□□□□□ -0.56
MACF1-220ENST00000485063 TRPM2O94759 1503 aa11.56□□□□□ -0.56
MACF1-220ENST00000485063 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
MACF1-220ENST00000485063 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
MACF1-220ENST00000485063 HRCP23327 699 aa11.55□□□□□ -0.56
MACF1-220ENST00000485063 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
MACF1-220ENST00000485063 BCANQ96GW7 911 aa11.55□□□□□ -0.56
MACF1-220ENST00000485063 ZNF326Q5BKZ1 582 aaKnown RBP11.54□□□□□ -0.56
MACF1-220ENST00000485063 CLTCL1P53675 1640 aa11.53□□□□□ -0.56
MACF1-220ENST00000485063 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
MACF1-220ENST00000485063 LTKP29376 864 aa11.53□□□□□ -0.56
MACF1-220ENST00000485063 CERKQ8TCT0 537 aa11.53□□□□□ -0.56
MACF1-220ENST00000485063 ZNF335Q9H4Z2 1342 aaPredicted RBP11.52□□□□□ -0.57
MACF1-220ENST00000485063 CCDC144AA2RUR9 1427 aa11.52□□□□□ -0.57
MACF1-220ENST00000485063 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
MACF1-220ENST00000485063 LTBP4Q8N2S1 1624 aa11.5□□□□□ -0.57
MACF1-220ENST00000485063 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
MACF1-220ENST00000485063 ZFYVE9O95405 1425 aa11.5□□□□□ -0.57
MACF1-220ENST00000485063 CPS1P31327 1500 aa11.5□□□□□ -0.57
MACF1-220ENST00000485063 PLEKHG1Q9ULL1 1385 aa11.49□□□□□ -0.57
MACF1-220ENST00000485063 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
MACF1-220ENST00000485063 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
MACF1-220ENST00000485063 IQSEC2Q5JU85 1478 aa11.48□□□□□ -0.57
MACF1-220ENST00000485063 FBXO41Q8TF61 875 aa11.47□□□□□ -0.57
MACF1-220ENST00000485063 SLC26A8Q96RN1 970 aa11.47□□□□□ -0.57
MACF1-220ENST00000485063 RPGRIP1LQ68CZ1 1315 aa11.46□□□□□ -0.57
MACF1-220ENST00000485063 VGFO15240 615 aaPredicted RBP11.46□□□□□ -0.57
MACF1-220ENST00000485063 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
MACF1-220ENST00000485063 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
MACF1-220ENST00000485063 PPLO60437 1756 aa11.44□□□□□ -0.58
MACF1-220ENST00000485063 RGL3Q3MIN7 710 aa11.44□□□□□ -0.58
MACF1-220ENST00000485063 TBX22Q9Y458 520 aa11.44□□□□□ -0.58
MACF1-220ENST00000485063 STRCP1A6NGW2 1772 aa11.44□□□□□ -0.58
MACF1-220ENST00000485063 KCNA6P17658 529 aa11.43□□□□□ -0.58
MACF1-220ENST00000485063 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
MACF1-220ENST00000485063 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
MACF1-220ENST00000485063 SETBP1Q9Y6X0 1596 aa11.41□□□□□ -0.58
MACF1-220ENST00000485063 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
MACF1-220ENST00000485063 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
MACF1-220ENST00000485063 IFT172Q9UG01 1749 aa11.4□□□□□ -0.58
MACF1-220ENST00000485063 NKTRP30414 1462 aaKnown RBP11.4□□□□□ -0.58
MACF1-220ENST00000485063 TOM1O60784 492 aa11.4□□□□□ -0.58
MACF1-220ENST00000485063 PROSER2Q86WR7 435 aaPredicted RBP11.4□□□□□ -0.58
MACF1-220ENST00000485063 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
MACF1-220ENST00000485063 SPATA31E1Q6ZUB1 1445 aa11.4□□□□□ -0.58
MACF1-220ENST00000485063 ADAMTS13Q76LX8 1427 aa11.4□□□□□ -0.58
MACF1-220ENST00000485063 NWD1Q149M9 1564 aa11.4□□□□□ -0.58
MACF1-220ENST00000485063 LRRC7Q96NW7 1537 aa11.4□□□□□ -0.59
MACF1-220ENST00000485063 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
MACF1-220ENST00000485063 UBAP1LF5GYI3 381 aa11.39□□□□□ -0.59
MACF1-220ENST00000485063 AKT1S1Q96B36 256 aa11.38□□□□□ -0.59
MACF1-220ENST00000485063 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
MACF1-220ENST00000485063 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
MACF1-220ENST00000485063 ALKQ9UM73 1620 aa11.36□□□□□ -0.59
MACF1-220ENST00000485063 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
MACF1-220ENST00000485063 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
MACF1-220ENST00000485063 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
MACF1-220ENST00000485063 ADGRF5Q8IZF2 1346 aa11.35□□□□□ -0.59
MACF1-220ENST00000485063 MYOM2P54296 1465 aa11.34□□□□□ -0.59
MACF1-220ENST00000485063 METP08581 1390 aa11.34□□□□□ -0.59
MACF1-220ENST00000485063 MSH6P52701 1360 aa11.34□□□□□ -0.59
MACF1-220ENST00000485063 SETD1AO15047 1707 aaKnown RBP11.34□□□□□ -0.59
MACF1-220ENST00000485063 LAMC1P11047 1609 aa11.34□□□□□ -0.59
MACF1-220ENST00000485063 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
MACF1-220ENST00000485063 XRN1Q8IZH2 1706 aaKnown RBP11.33□□□□□ -0.6
MACF1-220ENST00000485063 PIP4K2BP78356 416 aa11.33□□□□□ -0.6
MACF1-220ENST00000485063 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
MACF1-220ENST00000485063 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
MACF1-220ENST00000485063 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
MACF1-220ENST00000485063 PIK3C2GO75747 1445 aa11.32□□□□□ -0.6
MACF1-220ENST00000485063 PTPRUQ92729 1446 aa11.32□□□□□ -0.6
MACF1-220ENST00000485063 DHX57Q6P158 1386 aaKnown RBP11.3□□□□□ -0.6
MACF1-220ENST00000485063 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
MACF1-220ENST00000485063 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
MACF1-220ENST00000485063 ATF3P18847 181 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms