RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 PLEKHH2Q8IVE3 1493 aa18.68■□□□□ 0.58
RXRA-203ENST00000484822 IL27Q8NEV9 243 aa18.67■□□□□ 0.58
RXRA-203ENST00000484822 HMMRO75330 724 aa18.67■□□□□ 0.58
RXRA-203ENST00000484822 CREBRFQ8IUR6 639 aa18.67■□□□□ 0.58
RXRA-203ENST00000484822 CCAR2Q8N163 923 aaKnown RBP18.67■□□□□ 0.58
RXRA-203ENST00000484822 RRBP1Q9P2E9 1410 aaKnown RBP18.67■□□□□ 0.58
RXRA-203ENST00000484822 ZNF592Q92610 1267 aa18.67■□□□□ 0.58
RXRA-203ENST00000484822 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
RXRA-203ENST00000484822 USP47Q96K76 1375 aa18.66■□□□□ 0.58
RXRA-203ENST00000484822 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
RXRA-203ENST00000484822 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
RXRA-203ENST00000484822 BRPF3Q9ULD4 1205 aa18.66■□□□□ 0.58
RXRA-203ENST00000484822 A0A0U1RQG5 324 aaPredicted RBP18.66■□□□□ 0.58
RXRA-203ENST00000484822 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
RXRA-203ENST00000484822 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
RXRA-203ENST00000484822 AFAP1Q8N556 730 aa18.65■□□□□ 0.58
RXRA-203ENST00000484822 ISY1Q9ULR0 285 aaKnown RBP18.65■□□□□ 0.58
RXRA-203ENST00000484822 COG6Q9Y2V7 657 aa18.65■□□□□ 0.58
RXRA-203ENST00000484822 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.65■□□□□ 0.58
RXRA-203ENST00000484822 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
RXRA-203ENST00000484822 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
RXRA-203ENST00000484822 CUL7Q14999 1698 aa18.64■□□□□ 0.57
RXRA-203ENST00000484822 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
RXRA-203ENST00000484822 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.63■□□□□ 0.57
RXRA-203ENST00000484822 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
RXRA-203ENST00000484822 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
RXRA-203ENST00000484822 ANKRD45Q5TZF3 282 aa18.63■□□□□ 0.57
RXRA-203ENST00000484822 TPM3P06753 285 aa18.62■□□□□ 0.57
RXRA-203ENST00000484822 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
RXRA-203ENST00000484822 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
RXRA-203ENST00000484822 MAGI1Q96QZ7 1491 aaPredicted RBP18.62■□□□□ 0.57
RXRA-203ENST00000484822 GOLGA6L19H0YKK7 550 aa18.61■□□□□ 0.57
RXRA-203ENST00000484822 PDE4CQ08493 712 aa18.61■□□□□ 0.57
RXRA-203ENST00000484822 PANK3Q9H999 370 aa18.61■□□□□ 0.57
RXRA-203ENST00000484822 SF3A1Q15459 793 aaKnown RBP18.61■□□□□ 0.57
RXRA-203ENST00000484822 CCDC34Q96HJ3 373 aa18.61■□□□□ 0.57
RXRA-203ENST00000484822 BECN2A8MW95 431 aa18.6■□□□□ 0.57
RXRA-203ENST00000484822 PKNOX2Q96KN3 472 aa18.6■□□□□ 0.57
RXRA-203ENST00000484822 TIAM1Q13009 1591 aa18.6■□□□□ 0.57
RXRA-203ENST00000484822 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.56
RXRA-203ENST00000484822 SETQ01105 290 aaPredicted RBP18.58■□□□□ 0.56
RXRA-203ENST00000484822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.56
RXRA-203ENST00000484822 R3HCC1Q9Y3T6 440 aaKnown RBP18.58■□□□□ 0.56
RXRA-203ENST00000484822 DCAF8L1A6NGE4 600 aa18.57■□□□□ 0.56
RXRA-203ENST00000484822 GPATCH3Q96I76 525 aa18.57■□□□□ 0.56
RXRA-203ENST00000484822 AMPHP49418 695 aa18.57■□□□□ 0.56
RXRA-203ENST00000484822 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
RXRA-203ENST00000484822 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
RXRA-203ENST00000484822 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
RXRA-203ENST00000484822 RILPL2Q969X0 211 aa18.57■□□□□ 0.56
RXRA-203ENST00000484822 NUTM2FA1L443 756 aa18.56■□□□□ 0.56
RXRA-203ENST00000484822 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
RXRA-203ENST00000484822 G3V3G9 751 aa18.56■□□□□ 0.56
RXRA-203ENST00000484822 ELL2O00472 640 aaPredicted RBP18.56■□□□□ 0.56
RXRA-203ENST00000484822 DCAF8Q5TAQ9 597 aa18.56■□□□□ 0.56
RXRA-203ENST00000484822 ATP6V1DQ9Y5K8 247 aa18.56■□□□□ 0.56
RXRA-203ENST00000484822 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
RXRA-203ENST00000484822 RASSF8Q8NHQ8 419 aa18.55■□□□□ 0.56
RXRA-203ENST00000484822 MINK1Q8N4C8 1332 aaPredicted RBP18.54■□□□□ 0.56
RXRA-203ENST00000484822 EPRSP07814 1512 aaKnown RBP18.54■□□□□ 0.56
RXRA-203ENST00000484822 CHMP3Q9Y3E7 222 aa18.54■□□□□ 0.56
RXRA-203ENST00000484822 ZKSCAN2Q63HK3 967 aa18.54■□□□□ 0.56
RXRA-203ENST00000484822 GPS2Q13227 327 aa18.54■□□□□ 0.56
RXRA-203ENST00000484822 GORABQ5T7V8 394 aa18.54■□□□□ 0.56
RXRA-203ENST00000484822 H3BQV1 296 aa18.53■□□□□ 0.56
RXRA-203ENST00000484822 IFFO2Q5TF58 517 aa18.53■□□□□ 0.56
RXRA-203ENST00000484822 COG3Q96JB2 828 aa18.53■□□□□ 0.56
RXRA-203ENST00000484822 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
RXRA-203ENST00000484822 E9PSI1 815 aa18.52■□□□□ 0.56
RXRA-203ENST00000484822 PES1O00541 588 aaKnown RBP18.52■□□□□ 0.56
RXRA-203ENST00000484822 MRE11P49959 708 aa18.52■□□□□ 0.56
RXRA-203ENST00000484822 HFM1A2PYH4 1435 aa18.52■□□□□ 0.56
RXRA-203ENST00000484822 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
RXRA-203ENST00000484822 SUPT6HQ7KZ85 1726 aaKnown RBP18.51■□□□□ 0.55
RXRA-203ENST00000484822 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
RXRA-203ENST00000484822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.551e-7■■■■■ 32.1
RXRA-203ENST00000484822 FRAT2O75474 233 aaPredicted RBP18.5■□□□□ 0.55
RXRA-203ENST00000484822 APAF1O14727 1248 aa18.5■□□□□ 0.55
RXRA-203ENST00000484822 TEX35Q5T0J7 233 aa18.5■□□□□ 0.55
RXRA-203ENST00000484822 SCAPERQ9BY12 1400 aa18.5■□□□□ 0.55
RXRA-203ENST00000484822 MCTP1Q6DN14 999 aa18.49■□□□□ 0.55
RXRA-203ENST00000484822 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
RXRA-203ENST00000484822 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
RXRA-203ENST00000484822 NASPP49321 788 aaPredicted RBP18.48■□□□□ 0.55
RXRA-203ENST00000484822 EVA1CP58658 441 aa18.48■□□□□ 0.55
RXRA-203ENST00000484822 HOMER1Q86YM7 354 aa18.48■□□□□ 0.55
RXRA-203ENST00000484822 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.47■□□□□ 0.55
RXRA-203ENST00000484822 PATL2C9JE40 543 aaKnown RBP18.47■□□□□ 0.55
RXRA-203ENST00000484822 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
RXRA-203ENST00000484822 DAPK1P53355 1430 aa18.46■□□□□ 0.55
RXRA-203ENST00000484822 RNF214Q8ND24 703 aa18.46■□□□□ 0.55
RXRA-203ENST00000484822 C22orf23Q9BZE7 217 aa18.46■□□□□ 0.55
RXRA-203ENST00000484822 IFT57Q9NWB7 429 aa18.46■□□□□ 0.55
RXRA-203ENST00000484822 GTF2E1P29083 439 aaPredicted RBP18.45■□□□□ 0.54
RXRA-203ENST00000484822 RBM10P98175 930 aaKnown RBP18.45■□□□□ 0.54
RXRA-203ENST00000484822 TPD52L1Q16890 204 aaPredicted RBP18.45■□□□□ 0.54
RXRA-203ENST00000484822 MAP7D2Q96T17 732 aa18.45■□□□□ 0.54
RXRA-203ENST00000484822 TOMM22Q9NS69 142 aa18.45■□□□□ 0.54
RXRA-203ENST00000484822 REC8O95072 547 aa18.45■□□□□ 0.54
RXRA-203ENST00000484822 KIAA1107Q9UPP5 1409 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms