RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 NLRP1Q9C000 1473 aa23.61■■□□□ 1.37
UBE2E1-209ENST00000484048 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
UBE2E1-209ENST00000484048 ARHGAP31Q2M1Z3 1444 aa23.59■■□□□ 1.37
UBE2E1-209ENST00000484048 STRCP1A6NGW2 1772 aa23.58■■□□□ 1.37
UBE2E1-209ENST00000484048 TRPM2O94759 1503 aa23.54■■□□□ 1.36
UBE2E1-209ENST00000484048 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
UBE2E1-209ENST00000484048 KIF1BO60333 1816 aa23.49■■□□□ 1.35
UBE2E1-209ENST00000484048 SIN3AQ96ST3 1273 aa23.49■■□□□ 1.35
UBE2E1-209ENST00000484048 NOS1P29475 1434 aa23.49■■□□□ 1.35
UBE2E1-209ENST00000484048 PIK3C2BO00750 1634 aa23.48■■□□□ 1.35
UBE2E1-209ENST00000484048 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
UBE2E1-209ENST00000484048 FAM135BQ49AJ0 1406 aa23.47■■□□□ 1.35
UBE2E1-209ENST00000484048 ERVK-7P63135 1459 aa23.46■■□□□ 1.35
UBE2E1-209ENST00000484048 CCDC144AA2RUR9 1427 aa23.44■■□□□ 1.34
UBE2E1-209ENST00000484048 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
UBE2E1-209ENST00000484048 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
UBE2E1-209ENST00000484048 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
UBE2E1-209ENST00000484048 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
UBE2E1-209ENST00000484048 XIRP1Q702N8 1843 aaKnown RBP23.36■■□□□ 1.33
UBE2E1-209ENST00000484048 TIMELESSQ9UNS1 1208 aa23.35■■□□□ 1.33
UBE2E1-209ENST00000484048 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
UBE2E1-209ENST00000484048 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
UBE2E1-209ENST00000484048 ADGRB3O60242 1522 aa23.33■■□□□ 1.32
UBE2E1-209ENST00000484048 SPATA31E1Q6ZUB1 1445 aa23.33■■□□□ 1.32
UBE2E1-209ENST00000484048 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
UBE2E1-209ENST00000484048 IFT172Q9UG01 1749 aa23.32■■□□□ 1.32
UBE2E1-209ENST00000484048 TMEM131LA2VDJ0 1609 aa23.31■■□□□ 1.32
UBE2E1-209ENST00000484048 KDM5AP29375 1690 aaKnown RBP23.31■■□□□ 1.32
UBE2E1-209ENST00000484048 SLC52A1Q9NWF4 448 aa23.3■■□□□ 1.32
UBE2E1-209ENST00000484048 TMEM94Q12767 1356 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 LTKP29376 864 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 UBR1Q8IWV7 1749 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 PPLO60437 1756 aa23.28■■□□□ 1.32
UBE2E1-209ENST00000484048 TXNDC2Q86VQ3 553 aa23.28■■□□□ 1.32
UBE2E1-209ENST00000484048 SLIT1O75093 1534 aa23.28■■□□□ 1.32
UBE2E1-209ENST00000484048 IDI1Q13907 227 aa23.27■■□□□ 1.32
UBE2E1-209ENST00000484048 JCADQ9P266 1359 aa23.26■■□□□ 1.31
UBE2E1-209ENST00000484048 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
UBE2E1-209ENST00000484048 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
UBE2E1-209ENST00000484048 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
UBE2E1-209ENST00000484048 PPP1R15AO75807 674 aaPredicted RBP23.19■■□□□ 1.3
UBE2E1-209ENST00000484048 ZNF772Q68DY9 489 aaPredicted RBP23.19■■□□□ 1.3
UBE2E1-209ENST00000484048 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
UBE2E1-209ENST00000484048 CHGAP10645 457 aaKnown RBP23.18■■□□□ 1.3
UBE2E1-209ENST00000484048 PHLPP1O60346 1717 aa23.18■■□□□ 1.3
UBE2E1-209ENST00000484048 KCNA6P17658 529 aa23.17■■□□□ 1.3
UBE2E1-209ENST00000484048 LRP6O75581 1613 aa23.16■■□□□ 1.3
UBE2E1-209ENST00000484048 PROSER2Q86WR7 435 aaPredicted RBP23.16■■□□□ 1.3
UBE2E1-209ENST00000484048 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
UBE2E1-209ENST00000484048 MYOM2P54296 1465 aa23.15■■□□□ 1.3
UBE2E1-209ENST00000484048 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.3
UBE2E1-209ENST00000484048 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
UBE2E1-209ENST00000484048 DCAF11Q8TEB1 546 aa23.14■■□□□ 1.29
UBE2E1-209ENST00000484048 MSH6P52701 1360 aa23.14■■□□□ 1.29
UBE2E1-209ENST00000484048 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
UBE2E1-209ENST00000484048 RPGRIP1LQ68CZ1 1315 aa23.13■■□□□ 1.29
UBE2E1-209ENST00000484048 SLAIN2Q9P270 581 aa23.13■■□□□ 1.29
UBE2E1-209ENST00000484048 NKTRP30414 1462 aaKnown RBP23.12■■□□□ 1.29
UBE2E1-209ENST00000484048 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 TRPM1Q7Z4N2 1603 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 STAC3Q96MF2 364 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 STAG3Q9UJ98 1225 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 KIAA1210Q9ULL0 1709 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
UBE2E1-209ENST00000484048 RXRBP28702 533 aa23.1■■□□□ 1.29
UBE2E1-209ENST00000484048 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
UBE2E1-209ENST00000484048 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
UBE2E1-209ENST00000484048 NRXN1Q9ULB1 1477 aa23.09■■□□□ 1.29
UBE2E1-209ENST00000484048 SLC26A8Q96RN1 970 aa23.08■■□□□ 1.29
UBE2E1-209ENST00000484048 NWD1Q149M9 1564 aa23.08■■□□□ 1.29
UBE2E1-209ENST00000484048 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
UBE2E1-209ENST00000484048 ZFYVE9O95405 1425 aa23.07■■□□□ 1.28
UBE2E1-209ENST00000484048 SRCAPQ6ZRS2 3230 aa23.05■■□□□ 1.28
UBE2E1-209ENST00000484048 RIMS2Q9UQ26 1411 aa23.05■■□□□ 1.28
UBE2E1-209ENST00000484048 LAMC1P11047 1609 aa23.03■■□□□ 1.28
UBE2E1-209ENST00000484048 RALGAPBQ86X10 1494 aa23.03■■□□□ 1.28
UBE2E1-209ENST00000484048 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
UBE2E1-209ENST00000484048 PIK3C2GO75747 1445 aa23.01■■□□□ 1.27
UBE2E1-209ENST00000484048 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
UBE2E1-209ENST00000484048 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
UBE2E1-209ENST00000484048 NRXN3Q9Y4C0 1643 aa22.98■■□□□ 1.27
UBE2E1-209ENST00000484048 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.98■■□□□ 1.27
UBE2E1-209ENST00000484048 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
UBE2E1-209ENST00000484048 NUTM2DQ5VT03 806 aaPredicted RBP22.96■■□□□ 1.27
UBE2E1-209ENST00000484048 HDGFP51858 240 aaKnown RBP22.95■■□□□ 1.26
UBE2E1-209ENST00000484048 SETBP1Q9Y6X0 1596 aa22.95■■□□□ 1.26
UBE2E1-209ENST00000484048 RGS12O14924 1447 aa22.93■■□□□ 1.26
UBE2E1-209ENST00000484048 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
UBE2E1-209ENST00000484048 BCANQ96GW7 911 aa22.92■■□□□ 1.26
UBE2E1-209ENST00000484048 AFF2P51816 1311 aa22.91■■□□□ 1.26
UBE2E1-209ENST00000484048 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
UBE2E1-209ENST00000484048 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 NUTM2BA6NNL0 878 aaPredicted RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 NUTM2EB1AL46 878 aaPredicted RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 NUTM2AQ8IVF1 878 aaPredicted RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.26
UBE2E1-209ENST00000484048 C14orf93Q9H972 538 aaKnown RBP22.89■■□□□ 1.25
UBE2E1-209ENST00000484048 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms