RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
SEMA3D-204ENST00000484038 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
SEMA3D-204ENST00000484038 PSDA5PKW4 1024 aaPredicted RBP10.28□□□□□ -0.76
SEMA3D-204ENST00000484038 ARID3CA6NKF2 412 aa10.27□□□□□ -0.77
SEMA3D-204ENST00000484038 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
SEMA3D-204ENST00000484038 DDX12PQ92771 950 aa10.27□□□□□ -0.77
SEMA3D-204ENST00000484038 ANO8Q9HCE9 1232 aaPredicted RBP10.25□□□□□ -0.77
SEMA3D-204ENST00000484038 GRXCR2A6NFK2 248 aa10.24□□□□□ -0.77
SEMA3D-204ENST00000484038 POTEB3A0JP26 581 aa10.23□□□□□ -0.77
SEMA3D-204ENST00000484038 POTEBQ6S5H4 581 aa10.23□□□□□ -0.77
SEMA3D-204ENST00000484038 ARAP3Q8WWN8 1544 aa10.23□□□□□ -0.77
SEMA3D-204ENST00000484038 FOSBP53539 338 aa10.22□□□□□ -0.77
SEMA3D-204ENST00000484038 NBR1Q14596 966 aa10.22□□□□□ -0.77
SEMA3D-204ENST00000484038 FAM9AQ8IZU1 332 aaPredicted RBP10.22□□□□□ -0.77
SEMA3D-204ENST00000484038 PRXQ9BXM0 1461 aa10.21□□□□□ -0.77
SEMA3D-204ENST00000484038 PHF14O94880 888 aa10.21□□□□□ -0.78
SEMA3D-204ENST00000484038 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.78
SEMA3D-204ENST00000484038 ABCA9Q8IUA7 1624 aa10.21□□□□□ -0.78
SEMA3D-204ENST00000484038 ATP10BO94823 1461 aa10.2□□□□□ -0.78
SEMA3D-204ENST00000484038 PTPRMP28827 1452 aa10.2□□□□□ -0.78
SEMA3D-204ENST00000484038 ZNF687Q8N1G0 1237 aa10.2□□□□□ -0.78
SEMA3D-204ENST00000484038 ZDHHC16Q969W1 377 aa10.2□□□□□ -0.78
SEMA3D-204ENST00000484038 ADAMTSL3P82987 1691 aa10.2□□□□□ -0.78
SEMA3D-204ENST00000484038 SEMA3EO15041 775 aa10.19□□□□□ -0.78
SEMA3D-204ENST00000484038 PCDHGA10Q9Y5H3 936 aa10.19□□□□□ -0.78
SEMA3D-204ENST00000484038 RAPGEF3O95398 923 aa10.18□□□□□ -0.78
SEMA3D-204ENST00000484038 PTGER2P43116 358 aa10.18□□□□□ -0.78
SEMA3D-204ENST00000484038 FBXO41Q8TF61 875 aa10.18□□□□□ -0.78
SEMA3D-204ENST00000484038 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
SEMA3D-204ENST00000484038 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 EPAS1Q99814 870 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 RAPGEF6Q8TEU7 1601 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 PHLDB1Q86UU1 1377 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 ARID4BQ4LE39 1312 aaPredicted RBP10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 FBXW7Q969H0 707 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 FRMPD1Q5SYB0 1578 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 BCORL1Q5H9F3 1711 aa10.17□□□□□ -0.78
SEMA3D-204ENST00000484038 NEO1Q92859 1461 aa10.16□□□□□ -0.78
SEMA3D-204ENST00000484038 SAMD9Q5K651 1589 aa10.16□□□□□ -0.78
SEMA3D-204ENST00000484038 KCNK17Q96T54 332 aa10.16□□□□□ -0.78
SEMA3D-204ENST00000484038 PCF11O94913 1555 aaKnown RBP10.15□□□□□ -0.78
SEMA3D-204ENST00000484038 MAP3K7O43318 606 aa10.15□□□□□ -0.78
SEMA3D-204ENST00000484038 ADAM33Q9BZ11 813 aa10.15□□□□□ -0.78
SEMA3D-204ENST00000484038 RIMS1Q86UR5 1692 aaKnown RBP10.14□□□□□ -0.79
SEMA3D-204ENST00000484038 ARHGEF40Q8TER5 1519 aa10.14□□□□□ -0.79
SEMA3D-204ENST00000484038 PTPREP23469 700 aa10.13□□□□□ -0.79
SEMA3D-204ENST00000484038 PBX2P40425 430 aa10.13□□□□□ -0.79
SEMA3D-204ENST00000484038 LMTK3Q96Q04 1460 aa10.13□□□□□ -0.79
SEMA3D-204ENST00000484038 ARHGAP33O14559 1287 aa10.12□□□□□ -0.79
SEMA3D-204ENST00000484038 RANGAP1P46060 587 aaPredicted RBP10.12□□□□□ -0.79
SEMA3D-204ENST00000484038 PSEN2P49810 448 aa10.12□□□□□ -0.79
SEMA3D-204ENST00000484038 BCL2L12Q9HB09 334 aa10.12□□□□□ -0.79
SEMA3D-204ENST00000484038 NUP153P49790 1475 aaKnown RBP10.12□□□□□ -0.79
SEMA3D-204ENST00000484038 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
SEMA3D-204ENST00000484038 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
SEMA3D-204ENST00000484038 RICTORQ6R327 1708 aa10.11□□□□□ -0.79
SEMA3D-204ENST00000484038 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
SEMA3D-204ENST00000484038 PCDH10Q9P2E7 1040 aa10.11□□□□□ -0.79
SEMA3D-204ENST00000484038 CFAP74Q9C0B2 1584 aa10.1□□□□□ -0.79
SEMA3D-204ENST00000484038 DENND4BO75064 1496 aaPredicted RBP10.1□□□□□ -0.79
SEMA3D-204ENST00000484038 TESPA1A2RU30 521 aaPredicted RBP10.1□□□□□ -0.79
SEMA3D-204ENST00000484038 OSBPP22059 807 aa10.1□□□□□ -0.79
SEMA3D-204ENST00000484038 FHOD3Q2V2M9 1422 aa10.1□□□□□ -0.79
SEMA3D-204ENST00000484038 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
SEMA3D-204ENST00000484038 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
SEMA3D-204ENST00000484038 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
SEMA3D-204ENST00000484038 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
SEMA3D-204ENST00000484038 FANCAO15360 1455 aa10.09□□□□□ -0.79
SEMA3D-204ENST00000484038 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
SEMA3D-204ENST00000484038 TTC37Q6PGP7 1564 aa10.08□□□□□ -0.8
SEMA3D-204ENST00000484038 AKNAQ7Z591 1439 aa10.08□□□□□ -0.8
SEMA3D-204ENST00000484038 HSPA2P54652 639 aa10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 POGZQ7Z3K3 1410 aa10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 ZFYVE16Q7Z3T8 1539 aa10.07□□□□□ -0.8
SEMA3D-204ENST00000484038 SIGLEC1Q9BZZ2 1709 aa10.06□□□□□ -0.8
SEMA3D-204ENST00000484038 EFCAB5A4FU69 1503 aa10.06□□□□□ -0.8
SEMA3D-204ENST00000484038 ZMYM4Q5VZL5 1548 aa10.06□□□□□ -0.8
SEMA3D-204ENST00000484038 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
SEMA3D-204ENST00000484038 YEATS2Q9ULM3 1422 aa10.05□□□□□ -0.8
SEMA3D-204ENST00000484038 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
SEMA3D-204ENST00000484038 NUTM2FA1L443 756 aa10.04□□□□□ -0.8
SEMA3D-204ENST00000484038 PPP1R3GB7ZBB8 358 aa10.04□□□□□ -0.8
SEMA3D-204ENST00000484038 MLECQ14165 292 aa10.04□□□□□ -0.8
SEMA3D-204ENST00000484038 CDHR5Q9HBB8 845 aa10.04□□□□□ -0.8
SEMA3D-204ENST00000484038 COL9A1P20849 921 aa10.03□□□□□ -0.8
SEMA3D-204ENST00000484038 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
SEMA3D-204ENST00000484038 CDK13Q14004 1512 aaKnown RBP10.03□□□□□ -0.8
SEMA3D-204ENST00000484038 HECW1Q76N89 1606 aa10.03□□□□□ -0.8
SEMA3D-204ENST00000484038 MAGI2Q86UL8 1455 aa10.02□□□□□ -0.81
SEMA3D-204ENST00000484038 EEA1Q15075 1411 aa10.02□□□□□ -0.81
SEMA3D-204ENST00000484038 BCANQ96GW7 911 aa10.01□□□□□ -0.81
SEMA3D-204ENST00000484038 SCAPERQ9BY12 1400 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms