RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 HCSTQ9UBK5 93 aa14.25□□□□□ -0.13
COL8A1-207ENST00000483969 FOSBP53539 338 aa14.24□□□□□ -0.13
COL8A1-207ENST00000483969 CLIP1P30622 1438 aa14.24□□□□□ -0.13
COL8A1-207ENST00000483969 PLEKHD1A6NEE1 506 aa14.23□□□□□ -0.13
COL8A1-207ENST00000483969 EVI5O60447 810 aa14.22□□□□□ -0.13
COL8A1-207ENST00000483969 ANO8Q9HCE9 1232 aaPredicted RBP14.22□□□□□ -0.13
COL8A1-207ENST00000483969 ATP10BO94823 1461 aa14.22□□□□□ -0.13
COL8A1-207ENST00000483969 STAC3Q96MF2 364 aa14.21□□□□□ -0.13
COL8A1-207ENST00000483969 PTPREP23469 700 aa14.19□□□□□ -0.14
COL8A1-207ENST00000483969 SLC4A5Q9BY07 1137 aa14.19□□□□□ -0.14
COL8A1-207ENST00000483969 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
COL8A1-207ENST00000483969 MAP3K9P80192 1104 aa14.18□□□□□ -0.14
COL8A1-207ENST00000483969 VPS9D1Q9Y2B5 631 aa14.18□□□□□ -0.14
COL8A1-207ENST00000483969 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
COL8A1-207ENST00000483969 WDR7Q9Y4E6 1490 aa14.17□□□□□ -0.14
COL8A1-207ENST00000483969 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
COL8A1-207ENST00000483969 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
COL8A1-207ENST00000483969 ZCCHC11Q5TAX3 1644 aaKnown RBP14.15□□□□□ -0.14
COL8A1-207ENST00000483969 CADPS2Q86UW7 1296 aa14.15□□□□□ -0.14
COL8A1-207ENST00000483969 ZDHHC16Q969W1 377 aa14.15□□□□□ -0.14
COL8A1-207ENST00000483969 EMILIN3Q9NT22 766 aa14.15□□□□□ -0.14
COL8A1-207ENST00000483969 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
COL8A1-207ENST00000483969 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
COL8A1-207ENST00000483969 BBXQ8WY36 941 aaPredicted RBP14.12□□□□□ -0.15
COL8A1-207ENST00000483969 KCTD12Q96CX2 325 aaKnown RBP14.12□□□□□ -0.15
COL8A1-207ENST00000483969 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
COL8A1-207ENST00000483969 GLI2P10070 1586 aa14.12□□□□□ -0.15
COL8A1-207ENST00000483969 CD109Q6YHK3 1445 aa14.1□□□□□ -0.15
COL8A1-207ENST00000483969 ADAM33Q9BZ11 813 aa14.1□□□□□ -0.15
COL8A1-207ENST00000483969 PLA2G2EQ9NZK7 142 aa14.1□□□□□ -0.15
COL8A1-207ENST00000483969 ZBED2Q9BTP6 218 aa14.09□□□□□ -0.15
COL8A1-207ENST00000483969 HECW1Q76N89 1606 aa14.06□□□□□ -0.16
COL8A1-207ENST00000483969 CAMK2BQ13554 666 aa14.06□□□□□ -0.16
COL8A1-207ENST00000483969 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
COL8A1-207ENST00000483969 TEX14Q8IWB6 1497 aa14.05□□□□□ -0.16
COL8A1-207ENST00000483969 AMER1Q5JTC6 1135 aaPredicted RBP14.04□□□□□ -0.16
COL8A1-207ENST00000483969 NBPF3Q9H094 633 aa14.04□□□□□ -0.16
COL8A1-207ENST00000483969 PCDHGA10Q9Y5H3 936 aa14.04□□□□□ -0.16
COL8A1-207ENST00000483969 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
COL8A1-207ENST00000483969 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
COL8A1-207ENST00000483969 CDK13Q14004 1512 aaKnown RBP14.04□□□□□ -0.16
COL8A1-207ENST00000483969 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
COL8A1-207ENST00000483969 BHMG1C9JSJ3 638 aaPredicted RBP14.03□□□□□ -0.16
COL8A1-207ENST00000483969 PHF14O94880 888 aa14.03□□□□□ -0.16
COL8A1-207ENST00000483969 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
COL8A1-207ENST00000483969 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.16
COL8A1-207ENST00000483969 PHLDB1Q86UU1 1377 aa14.02□□□□□ -0.17
COL8A1-207ENST00000483969 TYW1BQ6NUM6 668 aa14.02□□□□□ -0.17
COL8A1-207ENST00000483969 TROQ12816 1431 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-207ENST00000483969 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
COL8A1-207ENST00000483969 GOLGA8CPA6NN73 597 aa14□□□□□ -0.17
COL8A1-207ENST00000483969 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
COL8A1-207ENST00000483969 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
COL8A1-207ENST00000483969 EFCAB2Q5VUJ9 269 aa13.98□□□□□ -0.17
COL8A1-207ENST00000483969 MAP3K4Q9Y6R4 1608 aa13.97□□□□□ -0.17
COL8A1-207ENST00000483969 DPYSL4O14531 572 aa13.97□□□□□ -0.17
COL8A1-207ENST00000483969 THSD4Q6ZMP0 1018 aa13.97□□□□□ -0.17
COL8A1-207ENST00000483969 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.97□□□□□ -0.17
COL8A1-207ENST00000483969 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
COL8A1-207ENST00000483969 EPAS1Q99814 870 aa13.96□□□□□ -0.17
COL8A1-207ENST00000483969 ABCA9Q8IUA7 1624 aa13.95□□□□□ -0.18
COL8A1-207ENST00000483969 SPRYD3Q8NCJ5 442 aa13.95□□□□□ -0.18
COL8A1-207ENST00000483969 WNT2BQ93097 391 aa13.95□□□□□ -0.18
COL8A1-207ENST00000483969 PLCH2O75038 1416 aa13.95□□□□□ -0.18
COL8A1-207ENST00000483969 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
COL8A1-207ENST00000483969 PTPN5P54829 565 aa13.94□□□□□ -0.18
COL8A1-207ENST00000483969 RABGEF1Q9UJ41 708 aa13.94□□□□□ -0.18
COL8A1-207ENST00000483969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL8A1-207ENST00000483969 NEO1Q92859 1461 aa13.93□□□□□ -0.18
COL8A1-207ENST00000483969 KDM6BO15054 1643 aa13.92□□□□□ -0.18
COL8A1-207ENST00000483969 COL17A1Q9UMD9 1497 aaPredicted RBP13.92□□□□□ -0.18
COL8A1-207ENST00000483969 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
COL8A1-207ENST00000483969 COL9A1P20849 921 aa13.91□□□□□ -0.18
COL8A1-207ENST00000483969 AKNAQ7Z591 1439 aa13.9□□□□□ -0.18
COL8A1-207ENST00000483969 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
COL8A1-207ENST00000483969 FANCAO15360 1455 aa13.9□□□□□ -0.18
COL8A1-207ENST00000483969 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.19
COL8A1-207ENST00000483969 PROX2Q3B8N5 592 aa13.89□□□□□ -0.19
COL8A1-207ENST00000483969 KIF14Q15058 1648 aa13.89□□□□□ -0.19
COL8A1-207ENST00000483969 PPRC1Q5VV67 1664 aaKnown RBP13.88□□□□□ -0.19
COL8A1-207ENST00000483969 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
COL8A1-207ENST00000483969 CFDP1Q9UEE9 299 aaPredicted RBP13.88□□□□□ -0.19
COL8A1-207ENST00000483969 PDIA6Q15084 440 aa13.87□□□□□ -0.19
COL8A1-207ENST00000483969 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
COL8A1-207ENST00000483969 ONECUT3O60422 494 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-207ENST00000483969 C6orf132Q5T0Z8 1188 aa13.86□□□□□ -0.19
COL8A1-207ENST00000483969 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-207ENST00000483969 LAPTM4BQ86VI4 370 aa13.86□□□□□ -0.19
COL8A1-207ENST00000483969 ANKK1Q8NFD2 765 aa13.86□□□□□ -0.19
COL8A1-207ENST00000483969 SCAPERQ9BY12 1400 aa13.86□□□□□ -0.19
COL8A1-207ENST00000483969 DENND4BO75064 1496 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-207ENST00000483969 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
COL8A1-207ENST00000483969 TTC37Q6PGP7 1564 aa13.85□□□□□ -0.19
COL8A1-207ENST00000483969 IFFO2Q5TF58 517 aa13.84□□□□□ -0.19
COL8A1-207ENST00000483969 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
COL8A1-207ENST00000483969 ARHGAP5Q13017 1502 aa13.84□□□□□ -0.19
COL8A1-207ENST00000483969 LRRC9Q6ZRR7 1453 aa13.83□□□□□ -0.2
COL8A1-207ENST00000483969 DDX12PQ92771 950 aa13.83□□□□□ -0.2
COL8A1-207ENST00000483969 EHBP1L1Q8N3D4 1523 aa13.83□□□□□ -0.2
COL8A1-207ENST00000483969 GPATCH8Q9UKJ3 1502 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms