RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CCP110O43303 1012 aa12.42□□□□□ -0.42
COL12A1-207ENST00000483888 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
COL12A1-207ENST00000483888 A0A0G2JS52 829 aa12.41□□□□□ -0.42
COL12A1-207ENST00000483888 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
COL12A1-207ENST00000483888 PCMTD1Q96MG8 357 aaPredicted RBP12.41□□□□□ -0.42
COL12A1-207ENST00000483888 ANKRD45Q5TZF3 282 aa12.4□□□□□ -0.42
COL12A1-207ENST00000483888 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
COL12A1-207ENST00000483888 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
COL12A1-207ENST00000483888 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
COL12A1-207ENST00000483888 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
COL12A1-207ENST00000483888 NAT10Q9H0A0 1025 aaKnown RBP12.4□□□□□ -0.42
COL12A1-207ENST00000483888 SETD5Q9C0A6 1442 aa12.39□□□□□ -0.43
COL12A1-207ENST00000483888 ANKRD20A12PQ8NF67 263 aa12.39□□□□□ -0.43
COL12A1-207ENST00000483888 DYNC1I1O14576 645 aa12.39□□□□□ -0.43
COL12A1-207ENST00000483888 MPNDQ8N594 471 aa12.38□□□□□ -0.43
COL12A1-207ENST00000483888 HMGB1P09429 215 aaKnown RBP12.38□□□□□ -0.43
COL12A1-207ENST00000483888 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
COL12A1-207ENST00000483888 PDILTQ8N807 584 aa12.38□□□□□ -0.43
COL12A1-207ENST00000483888 CGNL1Q0VF96 1302 aa12.38□□□□□ -0.43
COL12A1-207ENST00000483888 NAP1L1P55209 391 aaKnown RBP12.38□□□□□ -0.43
COL12A1-207ENST00000483888 MBD3O95983 291 aa12.38□□□□□ -0.43
COL12A1-207ENST00000483888 NEXNQ0ZGT2 675 aa12.37□□□□□ -0.43
COL12A1-207ENST00000483888 MORC1Q86VD1 984 aa12.37□□□□□ -0.43
COL12A1-207ENST00000483888 GOLGA6L10A6NI86 522 aa12.37□□□□□ -0.43
COL12A1-207ENST00000483888 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
COL12A1-207ENST00000483888 REC8O95072 547 aa12.37□□□□□ -0.43
COL12A1-207ENST00000483888 RILPL2Q969X0 211 aa12.37□□□□□ -0.43
COL12A1-207ENST00000483888 GTF2F1P35269 517 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL12A1-207ENST00000483888 HOOK1Q9UJC3 728 aaKnown RBP12.36□□□□□ -0.43
COL12A1-207ENST00000483888 SSR1P43307 286 aaKnown RBP12.36□□□□□ -0.43
COL12A1-207ENST00000483888 TDO2P48775 406 aa12.36□□□□□ -0.43
COL12A1-207ENST00000483888 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
COL12A1-207ENST00000483888 ERLIN1O75477 346 aa12.36□□□□□ -0.43
COL12A1-207ENST00000483888 CCDC146Q8IYE0 955 aa12.36□□□□□ -0.43
COL12A1-207ENST00000483888 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
COL12A1-207ENST00000483888 PRPF40AO75400 957 aaKnown RBP12.36□□□□□ -0.43
COL12A1-207ENST00000483888 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
COL12A1-207ENST00000483888 GTPBP4Q9BZE4 634 aaKnown RBP12.36□□□□□ -0.43
COL12A1-207ENST00000483888 NBPF1Q3BBV0 1214 aa12.36□□□□□ -0.43
COL12A1-207ENST00000483888 VGLL3A8MV65 326 aa12.35□□□□□ -0.43
COL12A1-207ENST00000483888 CCDC102AQ96A19 550 aa12.35□□□□□ -0.43
COL12A1-207ENST00000483888 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
COL12A1-207ENST00000483888 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
COL12A1-207ENST00000483888 MNAT1P51948 309 aa12.35□□□□□ -0.43
COL12A1-207ENST00000483888 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
COL12A1-207ENST00000483888 NOL10Q9BSC4 688 aaKnown RBP12.35□□□□□ -0.43
COL12A1-207ENST00000483888 FAM107BQ9H098 131 aa12.35□□□□□ -0.43
COL12A1-207ENST00000483888 SMC2O95347 1197 aa12.34□□□□□ -0.43
COL12A1-207ENST00000483888 POLR3GO15318 223 aaPredicted RBP12.34□□□□□ -0.43
COL12A1-207ENST00000483888 FAM193AP78312 1265 aa12.34□□□□□ -0.43
COL12A1-207ENST00000483888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL12A1-207ENST00000483888 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
COL12A1-207ENST00000483888 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.43
COL12A1-207ENST00000483888 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
COL12A1-207ENST00000483888 TMCO3Q6UWJ1 677 aa12.33□□□□□ -0.44
COL12A1-207ENST00000483888 POGKQ9P215 609 aa12.33□□□□□ -0.44
COL12A1-207ENST00000483888 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
COL12A1-207ENST00000483888 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
COL12A1-207ENST00000483888 ZFP91Q96JP5 570 aaPredicted RBP12.32□□□□□ -0.44
COL12A1-207ENST00000483888 SMC3Q9UQE7 1217 aa12.32□□□□□ -0.44
COL12A1-207ENST00000483888 DCAF11Q8TEB1 546 aa12.32□□□□□ -0.44
COL12A1-207ENST00000483888 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
COL12A1-207ENST00000483888 BACH2Q9BYV9 841 aa12.32□□□□□ -0.44
COL12A1-207ENST00000483888 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
COL12A1-207ENST00000483888 CCDC73Q6ZRK6 1079 aa12.31□□□□□ -0.44
COL12A1-207ENST00000483888 KIF15Q9NS87 1388 aa12.31□□□□□ -0.44
COL12A1-207ENST00000483888 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
COL12A1-207ENST00000483888 NF2P35240 595 aa12.31□□□□□ -0.44
COL12A1-207ENST00000483888 MCM4P33991 863 aa12.31□□□□□ -0.44
COL12A1-207ENST00000483888 ODF2Q5BJF6 829 aa12.3□□□□□ -0.44
COL12A1-207ENST00000483888 OLFM4Q6UX06 510 aa12.3□□□□□ -0.44
COL12A1-207ENST00000483888 U2AF1L5P0DN76 240 aaPredicted RBP12.3□□□□□ -0.44
COL12A1-207ENST00000483888 U2AF1Q01081 240 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL12A1-207ENST00000483888 SMAP1Q8IYB5 467 aaPredicted RBP12.3□□□□□ -0.44
COL12A1-207ENST00000483888 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
COL12A1-207ENST00000483888 CLGNO14967 610 aa12.29□□□□□ -0.44
COL12A1-207ENST00000483888 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
COL12A1-207ENST00000483888 FAM177A1Q8N128 213 aaPredicted RBP12.29□□□□□ -0.44
COL12A1-207ENST00000483888 SCRIBQ14160 1630 aa12.29□□□□□ -0.44
COL12A1-207ENST00000483888 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
COL12A1-207ENST00000483888 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
COL12A1-207ENST00000483888 UBXN4Q92575 508 aa12.29□□□□□ -0.44
COL12A1-207ENST00000483888 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
COL12A1-207ENST00000483888 CTR9Q6PD62 1173 aa12.28□□□□□ -0.44
COL12A1-207ENST00000483888 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
COL12A1-207ENST00000483888 TXLNBQ8N3L3 684 aa12.28□□□□□ -0.44
COL12A1-207ENST00000483888 RBM33Q96EV2 1170 aaKnown RBP12.28□□□□□ -0.44
COL12A1-207ENST00000483888 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
COL12A1-207ENST00000483888 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
COL12A1-207ENST00000483888 CCDC192P0DO97 292 aa12.28□□□□□ -0.44
COL12A1-207ENST00000483888 CLCN1P35523 988 aa12.28□□□□□ -0.44
COL12A1-207ENST00000483888 ENOX2Q16206 610 aaKnown RBP12.28□□□□□ -0.44
COL12A1-207ENST00000483888 CCDC91Q7Z6B0 441 aa12.28□□□□□ -0.44
COL12A1-207ENST00000483888 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.44
COL12A1-207ENST00000483888 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.44
COL12A1-207ENST00000483888 ANO2Q9NQ90 1003 aa12.27□□□□□ -0.44
COL12A1-207ENST00000483888 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.45
COL12A1-207ENST00000483888 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.45
COL12A1-207ENST00000483888 CCDC94Q9BW85 323 aaPredicted RBP12.27□□□□□ -0.45
COL12A1-207ENST00000483888 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms