RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 IRF6O14896 467 aa7.05□□□□□ -1.28
CLCC1-209ENST00000482889 EYA1Q99502 592 aa7.05□□□□□ -1.28
CLCC1-209ENST00000482889 DAXXQ9UER7 740 aaPredicted RBP7.05□□□□□ -1.28
CLCC1-209ENST00000482889 ADGRG1Q9Y653 693 aa7.05□□□□□ -1.28
CLCC1-209ENST00000482889 MINK1Q8N4C8 1332 aaPredicted RBP7.04□□□□□ -1.28
CLCC1-209ENST00000482889 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
CLCC1-209ENST00000482889 SMAPO00193 183 aa7.04□□□□□ -1.28
CLCC1-209ENST00000482889 UBTFP17480 764 aaKnown RBP7.04□□□□□ -1.28
CLCC1-209ENST00000482889 PARP9Q8IXQ6 854 aa7.03□□□□□ -1.28
CLCC1-209ENST00000482889 RBM46Q8TBY0 533 aaKnown RBP7.03□□□□□ -1.28
CLCC1-209ENST00000482889 REPIN1Q9BWE0 567 aaKnown RBP7.03□□□□□ -1.28
CLCC1-209ENST00000482889 C1orf115Q9H7X2 142 aa7.03□□□□□ -1.28
CLCC1-209ENST00000482889 OATP04181 439 aa7.02□□□□□ -1.29
CLCC1-209ENST00000482889 MAP2K5Q13163 448 aa7.02□□□□□ -1.29
CLCC1-209ENST00000482889 LRCH3Q96II8 777 aa7.02□□□□□ -1.29
CLCC1-209ENST00000482889 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.02□□□□□ -1.29
CLCC1-209ENST00000482889 AMHR2Q16671 573 aa7.01□□□□□ -1.29
CLCC1-209ENST00000482889 DNAJB2P25686 324 aa7□□□□□ -1.29
CLCC1-209ENST00000482889 BCAMP50895 628 aa7□□□□□ -1.29
CLCC1-209ENST00000482889 HDGFP51858 240 aaKnown RBP7□□□□□ -1.29
CLCC1-209ENST00000482889 NYAP1Q6ZVC0 841 aa7□□□□□ -1.29
CLCC1-209ENST00000482889 SAMD7Q7Z3H4 446 aa7□□□□□ -1.29
CLCC1-209ENST00000482889 PXYLP1Q8TE99 480 aa7□□□□□ -1.29
CLCC1-209ENST00000482889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.99□□□□□ -1.29
CLCC1-209ENST00000482889 TSR3Q9UJK0 312 aaKnown RBP6.99□□□□□ -1.29
CLCC1-209ENST00000482889 MS4A1P11836 297 aa6.98□□□□□ -1.29
CLCC1-209ENST00000482889 PTPN5P54829 565 aa6.98□□□□□ -1.29
CLCC1-209ENST00000482889 METTL3Q86U44 580 aaKnown RBP6.98□□□□□ -1.29
CLCC1-209ENST00000482889 NECTIN2Q92692 538 aa6.98□□□□□ -1.29
CLCC1-209ENST00000482889 TMEM134Q9H6X4 195 aa6.98□□□□□ -1.29
CLCC1-209ENST00000482889 RCCD1A6NED2 376 aa6.97□□□□□ -1.29
CLCC1-209ENST00000482889 FAM161AQ3B820 660 aa6.97□□□□□ -1.29
CLCC1-209ENST00000482889 SWT1Q5T5J6 900 aaKnown RBP6.97□□□□□ -1.29
CLCC1-209ENST00000482889 SLF2Q8IX21 1173 aa6.97□□□□□ -1.29
CLCC1-209ENST00000482889 RSPH6AQ9H0K4 717 aa6.97□□□□□ -1.29
CLCC1-209ENST00000482889 HPS5Q9UPZ3 1129 aa6.97□□□□□ -1.29
CLCC1-209ENST00000482889 SLC4A3P48751 1232 aa6.96□□□□□ -1.3
CLCC1-209ENST00000482889 WBP1LQ9NX94 342 aa6.96□□□□□ -1.3
CLCC1-209ENST00000482889 ARID3CA6NKF2 412 aa6.95□□□□□ -1.3
CLCC1-209ENST00000482889 PPP4CP60510 307 aa6.95□□□□□ -1.3
CLCC1-209ENST00000482889 PHOX2BQ99453 314 aa6.95□□□□□ -1.3
CLCC1-209ENST00000482889 DDRGK1Q96HY6 314 aa6.94□□□□□ -1.3
CLCC1-209ENST00000482889 ARID3AQ99856 593 aa6.94□□□□□ -1.3
CLCC1-209ENST00000482889 TMUB1Q9BVT8 246 aa6.94□□□□□ -1.3
CLCC1-209ENST00000482889 GIGYF2Q6Y7W6 1299 aaKnown RBP6.93□□□□□ -1.3
CLCC1-209ENST00000482889 IFFO2Q5TF58 517 aa6.92□□□□□ -1.3
CLCC1-209ENST00000482889 RNF40O75150 1001 aa6.91□□□□□ -1.3
CLCC1-209ENST00000482889 ITGBL1O95965 494 aaPredicted RBP6.91□□□□□ -1.3
CLCC1-209ENST00000482889 TTLL12Q14166 644 aaPredicted RBP6.91□□□□□ -1.3
CLCC1-209ENST00000482889 NLRP7Q8WX94 980 aa6.9□□□□□ -1.3
CLCC1-209ENST00000482889 CLUAP1Q96AJ1 413 aa6.9□□□□□ -1.3
CLCC1-209ENST00000482889 PRR14Q9BWN1 585 aa6.9□□□□□ -1.3
CLCC1-209ENST00000482889 HRCP23327 699 aa6.89□□□□□ -1.31
CLCC1-209ENST00000482889 TRIM26Q12899 539 aaPredicted RBP6.89□□□□□ -1.31
CLCC1-209ENST00000482889 RSPH4AQ5TD94 716 aa6.88□□□□□ -1.31
CLCC1-209ENST00000482889 SULF1Q8IWU6 871 aa6.88□□□□□ -1.31
CLCC1-209ENST00000482889 PROCA1Q8NCQ7 364 aaPredicted RBP6.88□□□□□ -1.31
CLCC1-209ENST00000482889 GOPCQ9HD26 462 aa6.88□□□□□ -1.31
CLCC1-209ENST00000482889 APBB1O00213 710 aa6.87□□□□□ -1.31
CLCC1-209ENST00000482889 SLC10A3P09131 477 aa6.87□□□□□ -1.31
CLCC1-209ENST00000482889 APLP1P51693 650 aa6.87□□□□□ -1.31
CLCC1-209ENST00000482889 MDM2Q00987 491 aaPredicted RBP6.87□□□□□ -1.31
CLCC1-209ENST00000482889 KMT5BQ4FZB7 885 aa6.87□□□□□ -1.31
CLCC1-209ENST00000482889 FBXO31Q5XUX0 539 aaPredicted RBP6.87□□□□□ -1.31
CLCC1-209ENST00000482889 ACTN4O43707 911 aaKnown RBP6.85□□□□□ -1.31
CLCC1-209ENST00000482889 CFHP08603 1231 aa6.85□□□□□ -1.31
CLCC1-209ENST00000482889 SSTR3P32745 418 aaPredicted RBP6.85□□□□□ -1.31
CLCC1-209ENST00000482889 CLCN1P35523 988 aa6.85□□□□□ -1.31
CLCC1-209ENST00000482889 TJAP1Q5JTD0 557 aa6.85□□□□□ -1.31
CLCC1-209ENST00000482889 GPCPD1Q9NPB8 672 aa6.85□□□□□ -1.31
CLCC1-209ENST00000482889 KCNC4Q03721 635 aa6.84□□□□□ -1.31
CLCC1-209ENST00000482889 FLIIQ13045 1269 aa6.84□□□□□ -1.31
CLCC1-209ENST00000482889 IRX2Q9BZI1 471 aaPredicted RBP6.84□□□□□ -1.31
CLCC1-209ENST00000482889 IL21Q9HBE4 155 aa6.84□□□□□ -1.31
CLCC1-209ENST00000482889 PODXL2Q9NZ53 605 aa6.84□□□□□ -1.31
CLCC1-209ENST00000482889 DDX11L8A8MPP1 907 aa6.83□□□□□ -1.32
CLCC1-209ENST00000482889 TRAK2O60296 914 aa6.83□□□□□ -1.32
CLCC1-209ENST00000482889 RGS20O76081 388 aa6.83□□□□□ -1.32
CLCC1-209ENST00000482889 SH3D19Q5HYK7 790 aa6.83□□□□□ -1.32
CLCC1-209ENST00000482889 POM121Q96HA1 1249 aa6.83□□□□□ -1.32
CLCC1-209ENST00000482889 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
CLCC1-209ENST00000482889 MTRQ99707 1265 aa6.83□□□□□ -1.32
CLCC1-209ENST00000482889 CD46P15529 392 aa6.82□□□□□ -1.32
CLCC1-209ENST00000482889 GCGRP47871 477 aa6.82□□□□□ -1.32
CLCC1-209ENST00000482889 RDH13Q8NBN7 331 aa6.82□□□□□ -1.32
CLCC1-209ENST00000482889 FAM217BQ9NTX9 383 aaPredicted RBP6.82□□□□□ -1.32
CLCC1-209ENST00000482889 POLR3EQ9NVU0 708 aa6.82□□□□□ -1.32
CLCC1-209ENST00000482889 PCDHB3Q9Y5E6 796 aa6.82□□□□□ -1.32
CLCC1-209ENST00000482889 A6NJR5 290 aa6.81□□□□□ -1.32
CLCC1-209ENST00000482889 MCM6Q14566 821 aa6.81□□□□□ -1.32
CLCC1-209ENST00000482889 SKIV2LQ15477 1246 aaKnown RBP6.81□□□□□ -1.32
CLCC1-209ENST00000482889 BEGAINQ9BUH8 593 aa6.81□□□□□ -1.32
CLCC1-209ENST00000482889 A0A0G2JS52 829 aa6.79□□□□□ -1.32
CLCC1-209ENST00000482889 ZPR1O75312 459 aa6.79□□□□□ -1.32
CLCC1-209ENST00000482889 CCDC82Q8N4S0 544 aa6.79□□□□□ -1.32
CLCC1-209ENST00000482889 ZNF777Q9ULD5 760 aaPredicted RBP6.79□□□□□ -1.32
CLCC1-209ENST00000482889 BLOC1S3Q6QNY0 202 aa6.78□□□□□ -1.32
CLCC1-209ENST00000482889 NR1I2O75469 434 aa6.77□□□□□ -1.33
CLCC1-209ENST00000482889 ATP6V1AP38606 617 aa6.77□□□□□ -1.33
CLCC1-209ENST00000482889 COPS2P61201 443 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms