RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
GTF3A-207ENST00000482655 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
GTF3A-207ENST00000482655 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
GTF3A-207ENST00000482655 ITGBL1O95965 494 aaPredicted RBP9.09□□□□□ -0.95
GTF3A-207ENST00000482655 RSPH4AQ5TD94 716 aa9.09□□□□□ -0.95
GTF3A-207ENST00000482655 APLP1P51693 650 aa9.08□□□□□ -0.96
GTF3A-207ENST00000482655 KCNC4Q03721 635 aa9.08□□□□□ -0.96
GTF3A-207ENST00000482655 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
GTF3A-207ENST00000482655 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
GTF3A-207ENST00000482655 IRF6O14896 467 aa9.06□□□□□ -0.96
GTF3A-207ENST00000482655 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
GTF3A-207ENST00000482655 CFHP08603 1231 aa9.05□□□□□ -0.96
GTF3A-207ENST00000482655 KRI1Q8N9T8 703 aaKnown RBP9.05□□□□□ -0.96
GTF3A-207ENST00000482655 NLRP7Q8WX94 980 aa9.05□□□□□ -0.96
GTF3A-207ENST00000482655 MTRQ99707 1265 aa9.05□□□□□ -0.96
GTF3A-207ENST00000482655 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-207ENST00000482655 SULF1Q8IWU6 871 aa9.04□□□□□ -0.96
GTF3A-207ENST00000482655 RDH13Q8NBN7 331 aa9.04□□□□□ -0.96
GTF3A-207ENST00000482655 CCDC102AQ96A19 550 aa9.04□□□□□ -0.96
GTF3A-207ENST00000482655 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
GTF3A-207ENST00000482655 DDX11L8A8MPP1 907 aa9.03□□□□□ -0.96
GTF3A-207ENST00000482655 BCANQ96GW7 911 aa9.03□□□□□ -0.96
GTF3A-207ENST00000482655 PHOX2BQ99453 314 aa9.03□□□□□ -0.96
GTF3A-207ENST00000482655 PCDHB3Q9Y5E6 796 aa9.03□□□□□ -0.96
GTF3A-207ENST00000482655 COPS2P61201 443 aa9.02□□□□□ -0.97
GTF3A-207ENST00000482655 TJAP1Q5JTD0 557 aa9.02□□□□□ -0.97
GTF3A-207ENST00000482655 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
GTF3A-207ENST00000482655 A0A0G2JS52 829 aa9.01□□□□□ -0.97
GTF3A-207ENST00000482655 SLC10A3P09131 477 aa9.01□□□□□ -0.97
GTF3A-207ENST00000482655 ZMYND10O75800 440 aa9□□□□□ -0.97
GTF3A-207ENST00000482655 BARGINQ6ZT62 677 aa9□□□□□ -0.97
GTF3A-207ENST00000482655 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
GTF3A-207ENST00000482655 MDM2Q00987 491 aaPredicted RBP8.99□□□□□ -0.97
GTF3A-207ENST00000482655 BLOC1S3Q6QNY0 202 aa8.97□□□□□ -0.97
GTF3A-207ENST00000482655 CLCN1P35523 988 aa8.96□□□□□ -0.98
GTF3A-207ENST00000482655 ZNF516Q92618 1163 aa8.96□□□□□ -0.98
GTF3A-207ENST00000482655 ZPR1O75312 459 aa8.95□□□□□ -0.98
GTF3A-207ENST00000482655 NR1I2O75469 434 aa8.95□□□□□ -0.98
GTF3A-207ENST00000482655 GPCPD1Q9NPB8 672 aa8.95□□□□□ -0.98
GTF3A-207ENST00000482655 RGS20O76081 388 aa8.93□□□□□ -0.98
GTF3A-207ENST00000482655 GCGRP47871 477 aa8.93□□□□□ -0.98
GTF3A-207ENST00000482655 TTLL12Q14166 644 aaPredicted RBP8.93□□□□□ -0.98
GTF3A-207ENST00000482655 GGCXP38435 758 aa8.92□□□□□ -0.98
GTF3A-207ENST00000482655 FUT2Q10981 343 aa8.91□□□□□ -0.98
GTF3A-207ENST00000482655 PUS10Q3MIT2 529 aaKnown RBP8.91□□□□□ -0.98
GTF3A-207ENST00000482655 GRIPAP1Q4V328 841 aa8.91□□□□□ -0.98
GTF3A-207ENST00000482655 NKX2-3Q8TAU0 364 aa8.91□□□□□ -0.98
GTF3A-207ENST00000482655 CD46P15529 392 aa8.9□□□□□ -0.98
GTF3A-207ENST00000482655 ATP6V1AP38606 617 aa8.9□□□□□ -0.98
GTF3A-207ENST00000482655 TLL1O43897 1013 aa8.89□□□□□ -0.99
GTF3A-207ENST00000482655 AMHR2Q16671 573 aa8.89□□□□□ -0.99
GTF3A-207ENST00000482655 AK7Q96M32 723 aa8.89□□□□□ -0.99
GTF3A-207ENST00000482655 FAM217BQ9NTX9 383 aaPredicted RBP8.89□□□□□ -0.99
GTF3A-207ENST00000482655 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
GTF3A-207ENST00000482655 SCUBE3Q8IX30 993 aa8.88□□□□□ -0.99
GTF3A-207ENST00000482655 KDM4AO75164 1064 aa8.87□□□□□ -0.99
GTF3A-207ENST00000482655 MORN1Q5T089 497 aa8.87□□□□□ -0.99
GTF3A-207ENST00000482655 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.87□□□□□ -0.99
GTF3A-207ENST00000482655 ADH1BP00325 375 aa8.86□□□□□ -0.99
GTF3A-207ENST00000482655 USP46P62068 366 aa8.85□□□□□ -0.99
GTF3A-207ENST00000482655 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
GTF3A-207ENST00000482655 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
GTF3A-207ENST00000482655 TRIM66O15016 1216 aa8.84□□□□□ -0.99
GTF3A-207ENST00000482655 SSTR3P32745 418 aaPredicted RBP8.84□□□□□ -0.99
GTF3A-207ENST00000482655 GIGYF2Q6Y7W6 1299 aaKnown RBP8.84□□□□□ -0.99
GTF3A-207ENST00000482655 SPSB2Q99619 263 aa8.84□□□□□ -0.99
GTF3A-207ENST00000482655 SLC24A3Q9HC58 644 aa8.84□□□□□ -0.99
GTF3A-207ENST00000482655 SLC27A5Q9Y2P5 690 aa8.84□□□□□ -0.99
GTF3A-207ENST00000482655 FMNL1O95466 1100 aaPredicted RBP8.83□□□□□ -1
GTF3A-207ENST00000482655 REPIN1Q9BWE0 567 aaKnown RBP8.83□□□□□ -1
GTF3A-207ENST00000482655 S1PR4O95977 384 aa8.82□□□□□ -1
GTF3A-207ENST00000482655 Q3C1V9 767 aa8.82□□□□□ -1
GTF3A-207ENST00000482655 SLC6A16Q9GZN6 736 aa8.82□□□□□ -1
GTF3A-207ENST00000482655 PARP9Q8IXQ6 854 aa8.81□□□□□ -1
GTF3A-207ENST00000482655 RNF223E7ERA6 249 aa8.8□□□□□ -1
GTF3A-207ENST00000482655 HOXA2O43364 376 aa8.8□□□□□ -1
GTF3A-207ENST00000482655 PRKD2Q9BZL6 878 aa8.8□□□□□ -1
GTF3A-207ENST00000482655 SALL2Q9Y467 1007 aaPredicted RBP8.8□□□□□ -1
GTF3A-207ENST00000482655 PDE4DQ08499 809 aa8.79□□□□□ -1
GTF3A-207ENST00000482655 ANKLE1Q8NAG6 615 aa8.78□□□□□ -1
GTF3A-207ENST00000482655 THAP11Q96EK4 314 aa8.78□□□□□ -1
GTF3A-207ENST00000482655 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
GTF3A-207ENST00000482655 BRICD5Q6PL45 260 aa8.77□□□□□ -1.01
GTF3A-207ENST00000482655 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
GTF3A-207ENST00000482655 IRX2Q9BZI1 471 aaPredicted RBP8.77□□□□□ -1.01
GTF3A-207ENST00000482655 V9GY48 417 aaPredicted RBP8.77□□□□□ -1.01
GTF3A-207ENST00000482655 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
GTF3A-207ENST00000482655 HLA-CQ95604 372 aa8.76□□□□□ -1.01
GTF3A-207ENST00000482655 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
GTF3A-207ENST00000482655 GUCA2AQ02747 115 aa8.74□□□□□ -1.01
GTF3A-207ENST00000482655 MSS51Q4VC12 460 aa8.74□□□□□ -1.01
GTF3A-207ENST00000482655 SPIRE2Q8WWL2 714 aa8.74□□□□□ -1.01
GTF3A-207ENST00000482655 USB1Q9BQ65 265 aaKnown RBP8.74□□□□□ -1.01
GTF3A-207ENST00000482655 FDX1P10109 184 aa8.73□□□□□ -1.01
GTF3A-207ENST00000482655 MS4A1P11836 297 aa8.73□□□□□ -1.01
GTF3A-207ENST00000482655 SLC19A1P41440 591 aa8.73□□□□□ -1.01
GTF3A-207ENST00000482655 FAM160A2Q8N612 972 aaPredicted RBP8.73□□□□□ -1.01
GTF3A-207ENST00000482655 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
GTF3A-207ENST00000482655 FCF1Q9Y324 198 aaKnown RBP8.72□□□□□ -1.01
GTF3A-207ENST00000482655 C6orf229H3BNL8 230 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms