RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 FAM161AQ3B820 660 aa13□□□□□ -0.33
CLK1-212ENST00000482590 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
CLK1-212ENST00000482590 LAPTM4AQ15012 233 aa12.99□□□□□ -0.33
CLK1-212ENST00000482590 GFRA3O60609 400 aa12.98□□□□□ -0.33
CLK1-212ENST00000482590 TMEM134Q9H6X4 195 aa12.98□□□□□ -0.33
CLK1-212ENST00000482590 V9GY48 417 aaPredicted RBP12.98□□□□□ -0.33
CLK1-212ENST00000482590 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
CLK1-212ENST00000482590 ZPR1O75312 459 aa12.97□□□□□ -0.33
CLK1-212ENST00000482590 PRR14Q9BWN1 585 aa12.97□□□□□ -0.33
CLK1-212ENST00000482590 RCCD1A6NED2 376 aa12.96□□□□□ -0.33
CLK1-212ENST00000482590 PCDHB3Q9Y5E6 796 aa12.96□□□□□ -0.33
CLK1-212ENST00000482590 LCE2BO14633 110 aa12.94□□□□□ -0.34
CLK1-212ENST00000482590 FCHSD2O94868 740 aa12.94□□□□□ -0.34
CLK1-212ENST00000482590 BLOC1S3Q6QNY0 202 aa12.94□□□□□ -0.34
CLK1-212ENST00000482590 GGCXP38435 758 aa12.92□□□□□ -0.34
CLK1-212ENST00000482590 TMUB1Q9BVT8 246 aa12.91□□□□□ -0.34
CLK1-212ENST00000482590 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
CLK1-212ENST00000482590 ACTN4O43707 911 aaKnown RBP12.88□□□□□ -0.35
CLK1-212ENST00000482590 CFHP08603 1231 aa12.88□□□□□ -0.35
CLK1-212ENST00000482590 SLC10A3P09131 477 aa12.88□□□□□ -0.35
CLK1-212ENST00000482590 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
CLK1-212ENST00000482590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
CLK1-212ENST00000482590 TLL1O43897 1013 aa12.87□□□□□ -0.35
CLK1-212ENST00000482590 PXYLP1Q8TE99 480 aa12.87□□□□□ -0.35
CLK1-212ENST00000482590 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
CLK1-212ENST00000482590 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
CLK1-212ENST00000482590 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
CLK1-212ENST00000482590 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
CLK1-212ENST00000482590 TRAF7Q6Q0C0 670 aa12.86□□□□□ -0.35
CLK1-212ENST00000482590 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
CLK1-212ENST00000482590 RNF223E7ERA6 249 aa12.85□□□□□ -0.35
CLK1-212ENST00000482590 OATP04181 439 aa12.84□□□□□ -0.35
CLK1-212ENST00000482590 HIC1Q14526 733 aa12.83□□□□□ -0.36
CLK1-212ENST00000482590 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
CLK1-212ENST00000482590 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
CLK1-212ENST00000482590 METTL3Q86U44 580 aaKnown RBP12.81□□□□□ -0.36
CLK1-212ENST00000482590 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
CLK1-212ENST00000482590 FECHP22830 423 aa12.8□□□□□ -0.36
CLK1-212ENST00000482590 GPR37O15354 613 aa12.78□□□□□ -0.36
CLK1-212ENST00000482590 S1PR4O95977 384 aa12.78□□□□□ -0.36
CLK1-212ENST00000482590 SLC19A1P41440 591 aa12.78□□□□□ -0.36
CLK1-212ENST00000482590 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.37
CLK1-212ENST00000482590 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.37
CLK1-212ENST00000482590 GNPATO15228 680 aa12.76□□□□□ -0.37
CLK1-212ENST00000482590 TRIM67Q6ZTA4 783 aa12.76□□□□□ -0.37
CLK1-212ENST00000482590 ANKLE1Q8NAG6 615 aa12.76□□□□□ -0.37
CLK1-212ENST00000482590 NR1I2O75469 434 aa12.75□□□□□ -0.37
CLK1-212ENST00000482590 ADH1BP00325 375 aa12.75□□□□□ -0.37
CLK1-212ENST00000482590 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
CLK1-212ENST00000482590 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
CLK1-212ENST00000482590 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
CLK1-212ENST00000482590 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
CLK1-212ENST00000482590 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
CLK1-212ENST00000482590 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
CLK1-212ENST00000482590 LIAT1Q6ZQX7 453 aa12.71□□□□□ -0.37
CLK1-212ENST00000482590 NLRP7Q8WX94 980 aa12.7□□□□□ -0.38
CLK1-212ENST00000482590 DAXXQ9UER7 740 aaPredicted RBP12.7□□□□□ -0.38
CLK1-212ENST00000482590 ZNF598Q86UK7 904 aaKnown RBP12.69□□□□□ -0.38
CLK1-212ENST00000482590 SLC6A16Q9GZN6 736 aa12.69□□□□□ -0.38
CLK1-212ENST00000482590 PLA2G2CQ5R387 149 aa12.67□□□□□ -0.38
CLK1-212ENST00000482590 PHOX2BQ99453 314 aa12.67□□□□□ -0.38
CLK1-212ENST00000482590 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
CLK1-212ENST00000482590 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
CLK1-212ENST00000482590 SPSB2Q99619 263 aa12.65□□□□□ -0.38
CLK1-212ENST00000482590 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
CLK1-212ENST00000482590 PRR20EP86478 221 aa12.64□□□□□ -0.39
CLK1-212ENST00000482590 PRR20CP86479 221 aa12.64□□□□□ -0.39
CLK1-212ENST00000482590 PRR20DP86480 221 aa12.64□□□□□ -0.39
CLK1-212ENST00000482590 PRR20BP86481 221 aa12.64□□□□□ -0.39
CLK1-212ENST00000482590 PRR20AP86496 221 aa12.64□□□□□ -0.39
CLK1-212ENST00000482590 ZNF697Q5TEC3 545 aa12.64□□□□□ -0.39
CLK1-212ENST00000482590 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
CLK1-212ENST00000482590 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
CLK1-212ENST00000482590 FUT2Q10981 343 aa12.63□□□□□ -0.39
CLK1-212ENST00000482590 MORN1Q5T089 497 aa12.63□□□□□ -0.39
CLK1-212ENST00000482590 GDF9O60383 454 aa12.61□□□□□ -0.39
CLK1-212ENST00000482590 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
CLK1-212ENST00000482590 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
CLK1-212ENST00000482590 GCGRP47871 477 aa12.6□□□□□ -0.39
CLK1-212ENST00000482590 ZNF787Q6DD87 383 aa12.6□□□□□ -0.39
CLK1-212ENST00000482590 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
CLK1-212ENST00000482590 PKDCCQ504Y2 493 aa12.59□□□□□ -0.39
CLK1-212ENST00000482590 EIF4G1Q04637 1599 aaKnown RBP12.59□□□□□ -0.39
CLK1-212ENST00000482590 TNFRSF10AO00220 468 aa12.58□□□□□ -0.4
CLK1-212ENST00000482590 DGAT1O75907 488 aa12.58□□□□□ -0.4
CLK1-212ENST00000482590 SULF1Q8IWU6 871 aa12.58□□□□□ -0.4
CLK1-212ENST00000482590 SLC27A5Q9Y2P5 690 aa12.58□□□□□ -0.4
CLK1-212ENST00000482590 MYT1Q01538 1121 aa12.57□□□□□ -0.4
CLK1-212ENST00000482590 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
CLK1-212ENST00000482590 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
CLK1-212ENST00000482590 FMNL1O95466 1100 aaPredicted RBP12.53□□□□□ -0.4
CLK1-212ENST00000482590 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
CLK1-212ENST00000482590 FAM187AA6NFU0 413 aa12.52□□□□□ -0.41
CLK1-212ENST00000482590 BRICD5Q6PL45 260 aa12.52□□□□□ -0.41
CLK1-212ENST00000482590 FCF1Q9Y324 198 aaKnown RBP12.52□□□□□ -0.41
CLK1-212ENST00000482590 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.41
CLK1-212ENST00000482590 PRDM9Q9NQV7 894 aa12.51□□□□□ -0.41
CLK1-212ENST00000482590 RPIAP49247 311 aa12.5□□□□□ -0.41
CLK1-212ENST00000482590 FOXC1Q12948 553 aa12.49□□□□□ -0.41
CLK1-212ENST00000482590 RNF19BQ6ZMZ0 732 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms