RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 ERBINQ96RT1 1412 aa14.37□□□□□ -0.11
SMPD4-218ENST00000482171 CRBNQ96SW2 442 aa14.37□□□□□ -0.11
SMPD4-218ENST00000482171 PPP2R1AP30153 589 aa14.37□□□□□ -0.11
SMPD4-218ENST00000482171 SPRYD3Q8NCJ5 442 aa14.37□□□□□ -0.11
SMPD4-218ENST00000482171 KIAA0556O60303 1618 aa14.37□□□□□ -0.11
SMPD4-218ENST00000482171 PDE4AP27815 886 aa14.36□□□□□ -0.11
SMPD4-218ENST00000482171 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-218ENST00000482171 RPRD2Q5VT52 1461 aaKnown RBP14.35□□□□□ -0.11
SMPD4-218ENST00000482171 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
SMPD4-218ENST00000482171 TXNDC2Q86VQ3 553 aa14.35□□□□□ -0.11
SMPD4-218ENST00000482171 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
SMPD4-218ENST00000482171 HMOX1P09601 288 aa14.35□□□□□ -0.11
SMPD4-218ENST00000482171 WDR62O43379 1518 aa14.35□□□□□ -0.11
SMPD4-218ENST00000482171 IPO8O15397 1037 aaKnown RBP14.34□□□□□ -0.11
SMPD4-218ENST00000482171 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
SMPD4-218ENST00000482171 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
SMPD4-218ENST00000482171 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
SMPD4-218ENST00000482171 BRD4O60885 1362 aaPredicted RBP14.33□□□□□ -0.11
SMPD4-218ENST00000482171 NUTM2GQ5VZR2 741 aa14.33□□□□□ -0.12
SMPD4-218ENST00000482171 IL27Q8NEV9 243 aa14.33□□□□□ -0.12
SMPD4-218ENST00000482171 ADGRF5Q8IZF2 1346 aa14.33□□□□□ -0.12
SMPD4-218ENST00000482171 DIAPH1O60610 1272 aaKnown RBP14.33□□□□□ -0.12
SMPD4-218ENST00000482171 FBXO31Q5XUX0 539 aaPredicted RBP14.33□□□□□ -0.12
SMPD4-218ENST00000482171 USP35Q9P2H5 1018 aa14.33□□□□□ -0.12
SMPD4-218ENST00000482171 FANCAO15360 1455 aa14.32□□□□□ -0.12
SMPD4-218ENST00000482171 E9PSI1 815 aa14.32□□□□□ -0.12
SMPD4-218ENST00000482171 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-218ENST00000482171 NCLP19338 710 aaKnown RBP14.32□□□□□ -0.12
SMPD4-218ENST00000482171 SLC26A8Q96RN1 970 aa14.32□□□□□ -0.12
SMPD4-218ENST00000482171 CFAP43Q8NDM7 1665 aa14.31□□□□□ -0.12
SMPD4-218ENST00000482171 SLC52A1Q9NWF4 448 aa14.31□□□□□ -0.12
SMPD4-218ENST00000482171 GSE1Q14687 1217 aa14.31□□□□□ -0.12
SMPD4-218ENST00000482171 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
SMPD4-218ENST00000482171 OS9Q13438 667 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-218ENST00000482171 RIPK4P57078 832 aa14.3□□□□□ -0.12
SMPD4-218ENST00000482171 SLC4A10Q6U841 1118 aa14.3□□□□□ -0.12
SMPD4-218ENST00000482171 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.3□□□□□ -0.12
SMPD4-218ENST00000482171 CHMP4BQ9H444 224 aaKnown RBP14.29□□□□□ -0.12
SMPD4-218ENST00000482171 CABP1Q9NZU7 370 aa14.29□□□□□ -0.12
SMPD4-218ENST00000482171 IDI1Q13907 227 aa14.29□□□□□ -0.12
SMPD4-218ENST00000482171 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
SMPD4-218ENST00000482171 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-218ENST00000482171 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-218ENST00000482171 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
SMPD4-218ENST00000482171 SYCP2Q9BX26 1530 aa14.28□□□□□ -0.12
SMPD4-218ENST00000482171 RUNDC1Q96C34 613 aa14.28□□□□□ -0.12
SMPD4-218ENST00000482171 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
SMPD4-218ENST00000482171 NUP160Q12769 1436 aa14.28□□□□□ -0.12
SMPD4-218ENST00000482171 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
SMPD4-218ENST00000482171 TRAPPC8Q9Y2L5 1435 aa14.27□□□□□ -0.12
SMPD4-218ENST00000482171 GOLGA6L22H0YM25 854 aa14.27□□□□□ -0.13
SMPD4-218ENST00000482171 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
SMPD4-218ENST00000482171 CDK19Q9BWU1 502 aa14.27□□□□□ -0.13
SMPD4-218ENST00000482171 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-218ENST00000482171 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
SMPD4-218ENST00000482171 PLCH2O75038 1416 aa14.26□□□□□ -0.13
SMPD4-218ENST00000482171 MAGI3Q5TCQ9 1506 aa14.26□□□□□ -0.13
SMPD4-218ENST00000482171 WAPLQ7Z5K2 1190 aa14.25□□□□□ -0.13
SMPD4-218ENST00000482171 STK31Q9BXU1 1019 aa14.25□□□□□ -0.13
SMPD4-218ENST00000482171 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
SMPD4-218ENST00000482171 TCOF1Q13428 1488 aaKnown RBP14.24□□□□□ -0.13
SMPD4-218ENST00000482171 CASC1Q6TDU7 716 aa14.24□□□□□ -0.13
SMPD4-218ENST00000482171 NECTIN2Q92692 538 aa14.24□□□□□ -0.13
SMPD4-218ENST00000482171 CEBPAP49715 358 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-218ENST00000482171 LMOD3Q0VAK6 560 aa14.23□□□□□ -0.13
SMPD4-218ENST00000482171 PANK1Q8TE04 598 aa14.23□□□□□ -0.13
SMPD4-218ENST00000482171 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
SMPD4-218ENST00000482171 DHX29Q7Z478 1369 aaKnown RBP14.22□□□□□ -0.13
SMPD4-218ENST00000482171 PSME1Q06323 249 aa14.22□□□□□ -0.13
SMPD4-218ENST00000482171 NLRP6P59044 892 aa14.21□□□□□ -0.13
SMPD4-218ENST00000482171 SAMD9Q5K651 1589 aa14.21□□□□□ -0.13
SMPD4-218ENST00000482171 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
SMPD4-218ENST00000482171 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
SMPD4-218ENST00000482171 DISP3Q9P2K9 1392 aa14.2□□□□□ -0.14
SMPD4-218ENST00000482171 MFAP1P55081 439 aaKnown RBP14.2□□□□□ -0.14
SMPD4-218ENST00000482171 PRKAR2BP31323 418 aa14.2□□□□□ -0.14
SMPD4-218ENST00000482171 PTMAP06454 111 aaKnown RBP14.19□□□□□ -0.14
SMPD4-218ENST00000482171 DNTTIP2Q5QJE6 756 aaKnown RBP14.19□□□□□ -0.14
SMPD4-218ENST00000482171 TSR2Q969E8 191 aaKnown RBP14.19□□□□□ -0.14
SMPD4-218ENST00000482171 RPGRIP1LQ68CZ1 1315 aa14.19□□□□□ -0.14
SMPD4-218ENST00000482171 NOS1P29475 1434 aa14.19□□□□□ -0.14
SMPD4-218ENST00000482171 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
SMPD4-218ENST00000482171 BCAR3O75815 825 aa14.18□□□□□ -0.14
SMPD4-218ENST00000482171 SMG6Q86US8 1419 aaKnown RBP14.18□□□□□ -0.14
SMPD4-218ENST00000482171 CENPQQ7L2Z9 268 aaPredicted RBP14.18□□□□□ -0.14
SMPD4-218ENST00000482171 ITSN2Q9NZM3 1697 aa14.18□□□□□ -0.14
SMPD4-218ENST00000482171 DENND4BO75064 1496 aaPredicted RBP14.18□□□□□ -0.14
SMPD4-218ENST00000482171 TAOK2Q9UL54 1235 aa14.18□□□□□ -0.14
SMPD4-218ENST00000482171 NFKBIBQ15653 356 aa14.17□□□□□ -0.14
SMPD4-218ENST00000482171 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
SMPD4-218ENST00000482171 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
SMPD4-218ENST00000482171 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
SMPD4-218ENST00000482171 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
SMPD4-218ENST00000482171 GOLGA6L3A6NEY3 463 aa14.16□□□□□ -0.14
SMPD4-218ENST00000482171 RRS1Q15050 365 aaKnown RBP14.16□□□□□ -0.14
SMPD4-218ENST00000482171 EIF2S2P20042 333 aaKnown RBP14.16□□□□□ -0.14
SMPD4-218ENST00000482171 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
SMPD4-218ENST00000482171 RBM33Q96EV2 1170 aaKnown RBP14.16□□□□□ -0.14
SMPD4-218ENST00000482171 KCNJ4P48050 445 aa14.15□□□□□ -0.14
SMPD4-218ENST00000482171 ARID3AQ99856 593 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms