RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 KANK4Q5T7N3 995 aaPredicted RBP4.11□□□□□ -1.75
RAB3IP-206ENST00000481897 CPS1P31327 1500 aa4.11□□□□□ -1.75
RAB3IP-206ENST00000481897 UHRF1BP1Q6BDS2 1440 aa4.11□□□□□ -1.75
RAB3IP-206ENST00000481897 NRXN1Q9ULB1 1477 aa4.11□□□□□ -1.75
RAB3IP-206ENST00000481897 LOC105371045A0A1W2PR82 267 aa4.11□□□□□ -1.75
RAB3IP-206ENST00000481897 KCNH8Q96L42 1107 aa4.11□□□□□ -1.75
RAB3IP-206ENST00000481897 RPGRIP1LQ68CZ1 1315 aa4.1□□□□□ -1.75
RAB3IP-206ENST00000481897 SLC4A2P04920 1241 aa4.1□□□□□ -1.75
RAB3IP-206ENST00000481897 TIMELESSQ9UNS1 1208 aa4.1□□□□□ -1.75
RAB3IP-206ENST00000481897 NKTRP30414 1462 aaKnown RBP4.1□□□□□ -1.75
RAB3IP-206ENST00000481897 SLC52A1Q9NWF4 448 aa4.1□□□□□ -1.75
RAB3IP-206ENST00000481897 IQGAP1P46940 1657 aa4.09□□□□□ -1.75
RAB3IP-206ENST00000481897 DLC1Q96QB1 1528 aa4.09□□□□□ -1.75
RAB3IP-206ENST00000481897 SETD1AO15047 1707 aaKnown RBP4.09□□□□□ -1.75
RAB3IP-206ENST00000481897 TNRQ92752 1358 aa4.09□□□□□ -1.75
RAB3IP-206ENST00000481897 CLTCL1P53675 1640 aa4.08□□□□□ -1.76
RAB3IP-206ENST00000481897 XRN1Q8IZH2 1706 aaKnown RBP4.08□□□□□ -1.76
RAB3IP-206ENST00000481897 ADGRB2O60241 1585 aa4.08□□□□□ -1.76
RAB3IP-206ENST00000481897 PKD2Q13563 968 aa4.08□□□□□ -1.76
RAB3IP-206ENST00000481897 ALKQ9UM73 1620 aa4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 NEXMIFQ5QGS0 1516 aa4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 ZMYM3Q14202 1370 aa4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 ANKRD30BQ9BXX2 1392 aa4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 HDGFP51858 240 aaKnown RBP4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 ATP1B4Q9UN42 357 aaPredicted RBP4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 STRCQ7RTU9 1775 aa4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 DCCP43146 1447 aa4.07□□□□□ -1.76
RAB3IP-206ENST00000481897 HNRNPMP52272 730 aaKnown RBP eCLIP4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 SPINK5Q9NQ38 1064 aaPredicted RBP4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 TECPR2O15040 1411 aa4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 CHD2O14647 1828 aaKnown RBP4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 CHRDL2Q6WN34 429 aa4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 PLEKHG1Q9ULL1 1385 aa4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 SCAF11Q99590 1463 aaKnown RBP4.06□□□□□ -1.76
RAB3IP-206ENST00000481897 SLC24A1O60721 1099 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 AFAP1Q8N556 730 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 PTCH1Q13635 1447 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 SPATA31E1Q6ZUB1 1445 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 RAPGEF3O95398 923 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 NRXN3Q9Y4C0 1643 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 TRIM26Q12899 539 aaPredicted RBP4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 SIRT1Q96EB6 747 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 ESF1Q9H501 851 aaKnown RBP4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 LRRC7Q96NW7 1537 aa4.05□□□□□ -1.76
RAB3IP-206ENST00000481897 USP54Q70EL1 1684 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 SPDYE2BA6NHP3 402 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 SPDYE6P0CI01 402 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 SPDYE2Q495Y8 402 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 ZNF644Q9H582 1327 aaPredicted RBP4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 KIF1AQ12756 1690 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 FXR2P51116 673 aaKnown RBP eCLIP4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 ITSN1Q15811 1721 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 NUP155O75694 1391 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 EIF3AQ14152 1382 aaKnown RBP4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 CDC42BPGQ6DT37 1551 aa4.04□□□□□ -1.76
RAB3IP-206ENST00000481897 MYO5BQ9ULV0 1848 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 FOXD4L1Q9NU39 408 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 BRD4O60885 1362 aaPredicted RBP4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 RAB3GAP2Q9H2M9 1393 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 CCDC144AA2RUR9 1427 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 FAM135BQ49AJ0 1406 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 TMEM2Q9UHN6 1383 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 THEMISQ8N1K5 641 aaPredicted RBP4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 TRPM1Q7Z4N2 1603 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 WASHC2CQ9Y4E1 1318 aa4.03□□□□□ -1.76
RAB3IP-206ENST00000481897 ZNF777Q9ULD5 760 aaPredicted RBP4.03□□□□□ -1.77
RAB3IP-206ENST00000481897 TTBK1Q5TCY1 1321 aaPredicted RBP4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 SBNO2Q9Y2G9 1366 aa4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 KIF3BO15066 747 aa4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 NPHP4O75161 1426 aaPredicted RBP4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 LTBP4Q8N2S1 1624 aa4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 GPRASP1Q5JY77 1395 aa4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 KDM4FA0A1W2PPD8 638 aa4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 FAM50AQ14320 339 aaKnown RBP4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 PIK3C2GO75747 1445 aa4.02□□□□□ -1.77
RAB3IP-206ENST00000481897 RALGAPBQ86X10 1494 aa4.01□□□□□ -1.77
RAB3IP-206ENST00000481897 ABCC6O95255 1503 aa4.01□□□□□ -1.77
RAB3IP-206ENST00000481897 RANGAP1P46060 587 aaPredicted RBP4.01□□□□□ -1.77
RAB3IP-206ENST00000481897 RIMS2Q9UQ26 1411 aa4.01□□□□□ -1.77
RAB3IP-206ENST00000481897 PUS7Q96PZ0 661 aaKnown RBP4.01□□□□□ -1.77
RAB3IP-206ENST00000481897 MST1RQ04912 1400 aa4.01□□□□□ -1.77
RAB3IP-206ENST00000481897 ARHGEF28Q8N1W1 1705 aaKnown RBP4□□□□□ -1.77
RAB3IP-206ENST00000481897 TOPAZ1Q8N9V7 1692 aa4□□□□□ -1.77
RAB3IP-206ENST00000481897 ADGRB1O14514 1584 aa4□□□□□ -1.77
RAB3IP-206ENST00000481897 FMN2Q9NZ56 1722 aa4□□□□□ -1.77
RAB3IP-206ENST00000481897 ANKARQ7Z5J8 1434 aa3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 TBX22Q9Y458 520 aa3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 ARID4BQ4LE39 1312 aaPredicted RBP3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 NINLQ9Y2I6 1382 aa3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 AHDC1Q5TGY3 1603 aaPredicted RBP3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 USP32Q8NFA0 1604 aa3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 ARID3CA6NKF2 412 aa3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 SPDYE1Q8NFV5 336 aaPredicted RBP3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 XIRP1Q702N8 1843 aaKnown RBP3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 DHX57Q6P158 1386 aaKnown RBP3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 NHSL1Q5SYE7 1610 aa3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 COL22A1Q8NFW1 1626 aaPredicted RBP3.99□□□□□ -1.77
RAB3IP-206ENST00000481897 VGFO15240 615 aaPredicted RBP3.98□□□□□ -1.77
RAB3IP-206ENST00000481897 RRP7BPQ9NSQ0 103 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms