RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 ZNF516Q92618 1163 aa7.62□□□□□ -1.19
KDM1A-204ENST00000481879 EYA1Q99502 592 aa7.62□□□□□ -1.19
KDM1A-204ENST00000481879 SLC4A3P48751 1232 aa7.61□□□□□ -1.19
KDM1A-204ENST00000481879 KCNV2Q8TDN2 545 aa7.61□□□□□ -1.19
KDM1A-204ENST00000481879 PTGDRQ13258 359 aa7.58□□□□□ -1.2
KDM1A-204ENST00000481879 NKX2-3Q8TAU0 364 aa7.58□□□□□ -1.2
KDM1A-204ENST00000481879 WFS1O76024 890 aa7.57□□□□□ -1.2
KDM1A-204ENST00000481879 COPS2P61201 443 aa7.57□□□□□ -1.2
KDM1A-204ENST00000481879 WIPF1O43516 503 aa7.56□□□□□ -1.2
KDM1A-204ENST00000481879 INSM1Q01101 510 aaPredicted RBP7.56□□□□□ -1.2
KDM1A-204ENST00000481879 RBM46Q8TBY0 533 aaKnown RBP7.56□□□□□ -1.2
KDM1A-204ENST00000481879 PRR14Q9BWN1 585 aa7.56□□□□□ -1.2
KDM1A-204ENST00000481879 NUTM2FA1L443 756 aa7.55□□□□□ -1.2
KDM1A-204ENST00000481879 DNAJB2P25686 324 aa7.55□□□□□ -1.2
KDM1A-204ENST00000481879 GGCXP38435 758 aa7.55□□□□□ -1.2
KDM1A-204ENST00000481879 ZPR1O75312 459 aa7.54□□□□□ -1.2
KDM1A-204ENST00000481879 P3H3Q8IVL6 736 aa7.54□□□□□ -1.2
KDM1A-204ENST00000481879 ADGRG1Q9Y653 693 aa7.54□□□□□ -1.2
KDM1A-204ENST00000481879 TMUB1Q9BVT8 246 aa7.53□□□□□ -1.2
KDM1A-204ENST00000481879 PCDHB3Q9Y5E6 796 aa7.53□□□□□ -1.2
KDM1A-204ENST00000481879 TMEM134Q9H6X4 195 aa7.52□□□□□ -1.21
KDM1A-204ENST00000481879 RCCD1A6NED2 376 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 SEMA3EO15041 775 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 FCHSD2O94868 740 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 PRR20EP86478 221 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 PRR20CP86479 221 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 PRR20DP86480 221 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 PRR20BP86481 221 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 PRR20AP86496 221 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
KDM1A-204ENST00000481879 ST8SIA5O15466 376 aa7.5□□□□□ -1.21
KDM1A-204ENST00000481879 NFX1Q12986 1120 aaKnown RBP7.5□□□□□ -1.21
KDM1A-204ENST00000481879 BLOC1S3Q6QNY0 202 aa7.5□□□□□ -1.21
KDM1A-204ENST00000481879 FAM187AA6NFU0 413 aa7.49□□□□□ -1.21
KDM1A-204ENST00000481879 ACTN4O43707 911 aaKnown RBP7.49□□□□□ -1.21
KDM1A-204ENST00000481879 SLC19A1P41440 591 aa7.49□□□□□ -1.21
KDM1A-204ENST00000481879 KMT5BQ4FZB7 885 aa7.49□□□□□ -1.21
KDM1A-204ENST00000481879 AAASQ9NRG9 546 aa7.49□□□□□ -1.21
KDM1A-204ENST00000481879 SUZ12Q15022 739 aaKnown RBP7.48□□□□□ -1.21
KDM1A-204ENST00000481879 EMID1Q96A84 441 aaPredicted RBP7.48□□□□□ -1.21
KDM1A-204ENST00000481879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
KDM1A-204ENST00000481879 OATP04181 439 aa7.47□□□□□ -1.21
KDM1A-204ENST00000481879 RNF223E7ERA6 249 aa7.46□□□□□ -1.22
KDM1A-204ENST00000481879 CFHP08603 1231 aa7.46□□□□□ -1.22
KDM1A-204ENST00000481879 SPRYD7Q5W111 196 aa7.46□□□□□ -1.22
KDM1A-204ENST00000481879 SLC10A3P09131 477 aa7.45□□□□□ -1.22
KDM1A-204ENST00000481879 ZNF598Q86UK7 904 aaKnown RBP7.45□□□□□ -1.22
KDM1A-204ENST00000481879 PXYLP1Q8TE99 480 aa7.45□□□□□ -1.22
KDM1A-204ENST00000481879 TLL1O43897 1013 aa7.44□□□□□ -1.22
KDM1A-204ENST00000481879 HIC1Q14526 733 aa7.44□□□□□ -1.22
KDM1A-204ENST00000481879 SMYD5Q6GMV2 418 aa7.44□□□□□ -1.22
KDM1A-204ENST00000481879 TESPA1A2RU30 521 aaPredicted RBP7.43□□□□□ -1.22
KDM1A-204ENST00000481879 NR1I2O75469 434 aa7.43□□□□□ -1.22
KDM1A-204ENST00000481879 RBM26Q5T8P6 1007 aaKnown RBP7.43□□□□□ -1.22
KDM1A-204ENST00000481879 RSPH4AQ5TD94 716 aa7.43□□□□□ -1.22
KDM1A-204ENST00000481879 GDF9O60383 454 aa7.42□□□□□ -1.22
KDM1A-204ENST00000481879 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
KDM1A-204ENST00000481879 ANKLE1Q8NAG6 615 aa7.42□□□□□ -1.22
KDM1A-204ENST00000481879 TNFRSF10AO00220 468 aa7.41□□□□□ -1.22
KDM1A-204ENST00000481879 PPEF1O14829 653 aaPredicted RBP7.41□□□□□ -1.22
KDM1A-204ENST00000481879 S1PR4O95977 384 aa7.41□□□□□ -1.22
KDM1A-204ENST00000481879 PLCB2Q00722 1185 aa7.41□□□□□ -1.22
KDM1A-204ENST00000481879 METTL3Q86U44 580 aaKnown RBP7.41□□□□□ -1.22
KDM1A-204ENST00000481879 DACH1Q9UI36 760 aa7.41□□□□□ -1.22
KDM1A-204ENST00000481879 ADH1BP00325 375 aa7.4□□□□□ -1.22
KDM1A-204ENST00000481879 SCUBE3Q8IX30 993 aa7.4□□□□□ -1.22
KDM1A-204ENST00000481879 GMPR2Q9P2T1 348 aaKnown RBP7.4□□□□□ -1.22
KDM1A-204ENST00000481879 C11orf95C9JLR9 678 aaPredicted RBP7.39□□□□□ -1.23
KDM1A-204ENST00000481879 GNPATO15228 680 aa7.39□□□□□ -1.23
KDM1A-204ENST00000481879 ZNF697Q5TEC3 545 aa7.39□□□□□ -1.23
KDM1A-204ENST00000481879 SLC6A16Q9GZN6 736 aa7.39□□□□□ -1.23
KDM1A-204ENST00000481879 FECHP22830 423 aa7.38□□□□□ -1.23
KDM1A-204ENST00000481879 PUS10Q3MIT2 529 aaKnown RBP7.38□□□□□ -1.23
KDM1A-204ENST00000481879 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
KDM1A-204ENST00000481879 CRIPAKQ8N1N5 446 aa7.38□□□□□ -1.23
KDM1A-204ENST00000481879 DAXXQ9UER7 740 aaPredicted RBP7.38□□□□□ -1.23
KDM1A-204ENST00000481879 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
KDM1A-204ENST00000481879 RDH13Q8NBN7 331 aa7.36□□□□□ -1.23
KDM1A-204ENST00000481879 SPSB2Q99619 263 aa7.36□□□□□ -1.23
KDM1A-204ENST00000481879 GPR37O15354 613 aa7.35□□□□□ -1.23
KDM1A-204ENST00000481879 DDX11L8A8MPP1 907 aa7.34□□□□□ -1.23
KDM1A-204ENST00000481879 TERTO14746 1132 aaKnown RBP7.32□□□□□ -1.24
KDM1A-204ENST00000481879 ATP6V1AP38606 617 aa7.32□□□□□ -1.24
KDM1A-204ENST00000481879 PLA2G2CQ5R387 149 aa7.32□□□□□ -1.24
KDM1A-204ENST00000481879 MORN1Q5T089 497 aa7.32□□□□□ -1.24
KDM1A-204ENST00000481879 SULF1Q8IWU6 871 aa7.32□□□□□ -1.24
KDM1A-204ENST00000481879 NLRP7Q8WX94 980 aa7.32□□□□□ -1.24
KDM1A-204ENST00000481879 GCGRP47871 477 aa7.31□□□□□ -1.24
KDM1A-204ENST00000481879 FUT2Q10981 343 aa7.31□□□□□ -1.24
KDM1A-204ENST00000481879 AXIN1O15169 862 aa7.3□□□□□ -1.24
KDM1A-204ENST00000481879 FMNL1O95466 1100 aaPredicted RBP7.3□□□□□ -1.24
KDM1A-204ENST00000481879 AVPP01185 164 aa7.3□□□□□ -1.24
KDM1A-204ENST00000481879 HAP1P54257 671 aaPredicted RBP7.3□□□□□ -1.24
KDM1A-204ENST00000481879 GPIHBP1Q8IV16 184 aa7.3□□□□□ -1.24
KDM1A-204ENST00000481879 THAP11Q96EK4 314 aa7.3□□□□□ -1.24
KDM1A-204ENST00000481879 PHOX2BQ99453 314 aa7.3□□□□□ -1.24
KDM1A-204ENST00000481879 SLC27A5Q9Y2P5 690 aa7.29□□□□□ -1.24
KDM1A-204ENST00000481879 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
KDM1A-204ENST00000481879 RPIAP49247 311 aa7.28□□□□□ -1.24
KDM1A-204ENST00000481879 FAM160A2Q8N612 972 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms