RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 CADPSQ9ULU8 1353 aa12.27□□□□□ -0.45
SPTA1-205ENST00000481212 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
SPTA1-205ENST00000481212 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
SPTA1-205ENST00000481212 VARS2Q5ST30 1063 aaKnown RBP12.24□□□□□ -0.45
SPTA1-205ENST00000481212 LAMC3Q9Y6N6 1575 aa12.24□□□□□ -0.45
SPTA1-205ENST00000481212 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
SPTA1-205ENST00000481212 DNAJB2P25686 324 aa12.23□□□□□ -0.45
SPTA1-205ENST00000481212 SH3D19Q5HYK7 790 aa12.23□□□□□ -0.45
SPTA1-205ENST00000481212 C3orf80F5H4A9 247 aa12.22□□□□□ -0.45
SPTA1-205ENST00000481212 ST18O60284 1047 aa12.22□□□□□ -0.45
SPTA1-205ENST00000481212 PSEN2P49810 448 aa12.22□□□□□ -0.45
SPTA1-205ENST00000481212 SKIV2LQ15477 1246 aaKnown RBP12.22□□□□□ -0.45
SPTA1-205ENST00000481212 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
SPTA1-205ENST00000481212 ZBED2Q9BTP6 218 aa12.21□□□□□ -0.45
SPTA1-205ENST00000481212 ATP1B4Q9UN42 357 aaPredicted RBP12.21□□□□□ -0.45
SPTA1-205ENST00000481212 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.46
SPTA1-205ENST00000481212 EMP3P54852 163 aa12.2□□□□□ -0.46
SPTA1-205ENST00000481212 DIXDC1Q155Q3 683 aa12.2□□□□□ -0.46
SPTA1-205ENST00000481212 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
SPTA1-205ENST00000481212 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
SPTA1-205ENST00000481212 SMAPO00193 183 aa12.19□□□□□ -0.46
SPTA1-205ENST00000481212 MRC2Q9UBG0 1479 aa12.17□□□□□ -0.46
SPTA1-205ENST00000481212 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
SPTA1-205ENST00000481212 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
SPTA1-205ENST00000481212 SLC4A5Q9BY07 1137 aa12.17□□□□□ -0.46
SPTA1-205ENST00000481212 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
SPTA1-205ENST00000481212 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
SPTA1-205ENST00000481212 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
SPTA1-205ENST00000481212 PBX2P40425 430 aa12.16□□□□□ -0.46
SPTA1-205ENST00000481212 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
SPTA1-205ENST00000481212 RABGEF1Q9UJ41 708 aa12.16□□□□□ -0.46
SPTA1-205ENST00000481212 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
SPTA1-205ENST00000481212 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
SPTA1-205ENST00000481212 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.46
SPTA1-205ENST00000481212 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
SPTA1-205ENST00000481212 CD46P15529 392 aa12.14□□□□□ -0.47
SPTA1-205ENST00000481212 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
SPTA1-205ENST00000481212 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
SPTA1-205ENST00000481212 WIZO95785 1651 aa12.13□□□□□ -0.47
SPTA1-205ENST00000481212 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
SPTA1-205ENST00000481212 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
SPTA1-205ENST00000481212 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
SPTA1-205ENST00000481212 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
SPTA1-205ENST00000481212 FLIIQ13045 1269 aa12.12□□□□□ -0.47
SPTA1-205ENST00000481212 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
SPTA1-205ENST00000481212 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
SPTA1-205ENST00000481212 CEP164Q9UPV0 1460 aa12.1□□□□□ -0.47
SPTA1-205ENST00000481212 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
SPTA1-205ENST00000481212 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
SPTA1-205ENST00000481212 VPS9D1Q9Y2B5 631 aa12.1□□□□□ -0.47
SPTA1-205ENST00000481212 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
SPTA1-205ENST00000481212 SEPT9Q9UHD8 586 aaPredicted RBP12.08□□□□□ -0.48
SPTA1-205ENST00000481212 WDR62O43379 1518 aa12.07□□□□□ -0.48
SPTA1-205ENST00000481212 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
SPTA1-205ENST00000481212 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
SPTA1-205ENST00000481212 SLC4A3P48751 1232 aa12.06□□□□□ -0.48
SPTA1-205ENST00000481212 FAM98CQ17RN3 349 aaKnown RBP12.06□□□□□ -0.48
SPTA1-205ENST00000481212 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
SPTA1-205ENST00000481212 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPTA1-205ENST00000481212 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
SPTA1-205ENST00000481212 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
SPTA1-205ENST00000481212 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
SPTA1-205ENST00000481212 SPTLC1O15269 473 aa12.03□□□□□ -0.48
SPTA1-205ENST00000481212 KDM4AO75164 1064 aa12.03□□□□□ -0.48
SPTA1-205ENST00000481212 GCGRP47871 477 aa12.03□□□□□ -0.48
SPTA1-205ENST00000481212 CFTRP13569 1480 aa12.02□□□□□ -0.48
SPTA1-205ENST00000481212 TK2O00142 265 aa12.02□□□□□ -0.49
SPTA1-205ENST00000481212 LIMD1Q9UGP4 676 aa12.02□□□□□ -0.49
SPTA1-205ENST00000481212 POTEB3A0JP26 581 aa12.01□□□□□ -0.49
SPTA1-205ENST00000481212 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
SPTA1-205ENST00000481212 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
SPTA1-205ENST00000481212 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
SPTA1-205ENST00000481212 POTEBQ6S5H4 581 aa12.01□□□□□ -0.49
SPTA1-205ENST00000481212 SLF2Q8IX21 1173 aa12.01□□□□□ -0.49
SPTA1-205ENST00000481212 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
SPTA1-205ENST00000481212 BHMG1C9JSJ3 638 aaPredicted RBP12□□□□□ -0.49
SPTA1-205ENST00000481212 SLC10A3P09131 477 aa12□□□□□ -0.49
SPTA1-205ENST00000481212 GJA5P36382 358 aa12□□□□□ -0.49
SPTA1-205ENST00000481212 USP46P62068 366 aa12□□□□□ -0.49
SPTA1-205ENST00000481212 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
SPTA1-205ENST00000481212 NDUFV2P19404 249 aa11.99□□□□□ -0.49
SPTA1-205ENST00000481212 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
SPTA1-205ENST00000481212 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
SPTA1-205ENST00000481212 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
SPTA1-205ENST00000481212 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
SPTA1-205ENST00000481212 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
SPTA1-205ENST00000481212 RFC5P40937 340 aa11.96□□□□□ -0.49
SPTA1-205ENST00000481212 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
SPTA1-205ENST00000481212 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
SPTA1-205ENST00000481212 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
SPTA1-205ENST00000481212 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
SPTA1-205ENST00000481212 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
SPTA1-205ENST00000481212 BANK1Q8NDB2 785 aa11.95□□□□□ -0.5
SPTA1-205ENST00000481212 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
SPTA1-205ENST00000481212 GRIPAP1Q4V328 841 aa11.94□□□□□ -0.5
SPTA1-205ENST00000481212 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
SPTA1-205ENST00000481212 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
SPTA1-205ENST00000481212 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
SPTA1-205ENST00000481212 UBTFP17480 764 aaKnown RBP11.93□□□□□ -0.5
SPTA1-205ENST00000481212 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms