RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 NECTIN2Q92692 538 aa10.06□□□□□ -0.8
CHCHD3-205ENST00000481152 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
CHCHD3-205ENST00000481152 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
CHCHD3-205ENST00000481152 APLP1P51693 650 aa10.03□□□□□ -0.8
CHCHD3-205ENST00000481152 MAP2K5Q13163 448 aa10.02□□□□□ -0.8
CHCHD3-205ENST00000481152 PHOX2BQ99453 314 aa10.01□□□□□ -0.81
CHCHD3-205ENST00000481152 KCNC4Q03721 635 aa10□□□□□ -0.81
CHCHD3-205ENST00000481152 NLRP7Q8WX94 980 aa10□□□□□ -0.81
CHCHD3-205ENST00000481152 IRF6O14896 467 aa9.99□□□□□ -0.81
CHCHD3-205ENST00000481152 TJAP1Q5JTD0 557 aa9.98□□□□□ -0.81
CHCHD3-205ENST00000481152 MTRQ99707 1265 aa9.98□□□□□ -0.81
CHCHD3-205ENST00000481152 PRR14Q9BWN1 585 aa9.98□□□□□ -0.81
CHCHD3-205ENST00000481152 MINK1Q8N4C8 1332 aaPredicted RBP9.98□□□□□ -0.81
CHCHD3-205ENST00000481152 SLC10A3P09131 477 aa9.97□□□□□ -0.81
CHCHD3-205ENST00000481152 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
CHCHD3-205ENST00000481152 A0A0G2JS52 829 aa9.96□□□□□ -0.82
CHCHD3-205ENST00000481152 CFHP08603 1231 aa9.96□□□□□ -0.82
CHCHD3-205ENST00000481152 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
CHCHD3-205ENST00000481152 CCDC102AQ96A19 550 aa9.95□□□□□ -0.82
CHCHD3-205ENST00000481152 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
CHCHD3-205ENST00000481152 KMT5BQ4FZB7 885 aa9.94□□□□□ -0.82
CHCHD3-205ENST00000481152 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
CHCHD3-205ENST00000481152 DDX11L8A8MPP1 907 aa9.92□□□□□ -0.82
CHCHD3-205ENST00000481152 ACTN4O43707 911 aaKnown RBP9.92□□□□□ -0.82
CHCHD3-205ENST00000481152 ZMYND10O75800 440 aa9.92□□□□□ -0.82
CHCHD3-205ENST00000481152 COPS2P61201 443 aa9.92□□□□□ -0.82
CHCHD3-205ENST00000481152 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
CHCHD3-205ENST00000481152 BARGINQ6ZT62 677 aa9.92□□□□□ -0.82
CHCHD3-205ENST00000481152 ZNF516Q92618 1163 aa9.91□□□□□ -0.82
CHCHD3-205ENST00000481152 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
CHCHD3-205ENST00000481152 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.82
CHCHD3-205ENST00000481152 RDH13Q8NBN7 331 aa9.9□□□□□ -0.82
CHCHD3-205ENST00000481152 BLOC1S3Q6QNY0 202 aa9.89□□□□□ -0.83
CHCHD3-205ENST00000481152 MDM2Q00987 491 aaPredicted RBP9.88□□□□□ -0.83
CHCHD3-205ENST00000481152 BCANQ96GW7 911 aa9.88□□□□□ -0.83
CHCHD3-205ENST00000481152 ZPR1O75312 459 aa9.87□□□□□ -0.83
CHCHD3-205ENST00000481152 GCGRP47871 477 aa9.85□□□□□ -0.83
CHCHD3-205ENST00000481152 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
CHCHD3-205ENST00000481152 RGS20O76081 388 aa9.84□□□□□ -0.83
CHCHD3-205ENST00000481152 CLCN1P35523 988 aa9.84□□□□□ -0.83
CHCHD3-205ENST00000481152 GPCPD1Q9NPB8 672 aa9.84□□□□□ -0.83
CHCHD3-205ENST00000481152 TLL1O43897 1013 aa9.82□□□□□ -0.84
CHCHD3-205ENST00000481152 NR1I2O75469 434 aa9.82□□□□□ -0.84
CHCHD3-205ENST00000481152 CD46P15529 392 aa9.82□□□□□ -0.84
CHCHD3-205ENST00000481152 FUT2Q10981 343 aa9.82□□□□□ -0.84
CHCHD3-205ENST00000481152 PUS10Q3MIT2 529 aaKnown RBP9.82□□□□□ -0.84
CHCHD3-205ENST00000481152 TMUB1Q9BVT8 246 aa9.82□□□□□ -0.84
CHCHD3-205ENST00000481152 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
CHCHD3-205ENST00000481152 FAM217BQ9NTX9 383 aaPredicted RBP9.8□□□□□ -0.84
CHCHD3-205ENST00000481152 ATP6V1AP38606 617 aa9.79□□□□□ -0.84
CHCHD3-205ENST00000481152 AMHR2Q16671 573 aa9.79□□□□□ -0.84
CHCHD3-205ENST00000481152 SCUBE3Q8IX30 993 aa9.79□□□□□ -0.84
CHCHD3-205ENST00000481152 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
CHCHD3-205ENST00000481152 MORN1Q5T089 497 aa9.78□□□□□ -0.84
CHCHD3-205ENST00000481152 TTLL12Q14166 644 aaPredicted RBP9.77□□□□□ -0.84
CHCHD3-205ENST00000481152 AK7Q96M32 723 aa9.77□□□□□ -0.84
CHCHD3-205ENST00000481152 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.84
CHCHD3-205ENST00000481152 GGCXP38435 758 aa9.76□□□□□ -0.85
CHCHD3-205ENST00000481152 TRIM66O15016 1216 aa9.75□□□□□ -0.85
CHCHD3-205ENST00000481152 KDM4AO75164 1064 aa9.75□□□□□ -0.85
CHCHD3-205ENST00000481152 ADH1BP00325 375 aa9.75□□□□□ -0.85
CHCHD3-205ENST00000481152 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
CHCHD3-205ENST00000481152 SLC27A5Q9Y2P5 690 aa9.75□□□□□ -0.85
CHCHD3-205ENST00000481152 GIGYF2Q6Y7W6 1299 aaKnown RBP9.74□□□□□ -0.85
CHCHD3-205ENST00000481152 S1PR4O95977 384 aa9.73□□□□□ -0.85
CHCHD3-205ENST00000481152 SSTR3P32745 418 aaPredicted RBP9.73□□□□□ -0.85
CHCHD3-205ENST00000481152 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
CHCHD3-205ENST00000481152 SPSB2Q99619 263 aa9.73□□□□□ -0.85
CHCHD3-205ENST00000481152 SLC24A3Q9HC58 644 aa9.73□□□□□ -0.85
CHCHD3-205ENST00000481152 USP46P62068 366 aa9.72□□□□□ -0.85
CHCHD3-205ENST00000481152 THAP11Q96EK4 314 aa9.72□□□□□ -0.85
CHCHD3-205ENST00000481152 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
CHCHD3-205ENST00000481152 SLC6A16Q9GZN6 736 aa9.71□□□□□ -0.86
CHCHD3-205ENST00000481152 HOXA2O43364 376 aa9.7□□□□□ -0.86
CHCHD3-205ENST00000481152 FMNL1O95466 1100 aaPredicted RBP9.7□□□□□ -0.86
CHCHD3-205ENST00000481152 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
CHCHD3-205ENST00000481152 BRICD5Q6PL45 260 aa9.69□□□□□ -0.86
CHCHD3-205ENST00000481152 NUTM1Q86Y26 1132 aa9.69□□□□□ -0.86
CHCHD3-205ENST00000481152 HLA-CQ95604 372 aa9.69□□□□□ -0.86
CHCHD3-205ENST00000481152 PRKD2Q9BZL6 878 aa9.69□□□□□ -0.86
CHCHD3-205ENST00000481152 RNF19BQ6ZMZ0 732 aa9.68□□□□□ -0.86
CHCHD3-205ENST00000481152 PDE4DQ08499 809 aa9.67□□□□□ -0.86
CHCHD3-205ENST00000481152 Q3C1V9 767 aa9.67□□□□□ -0.86
CHCHD3-205ENST00000481152 ANKLE1Q8NAG6 615 aa9.67□□□□□ -0.86
CHCHD3-205ENST00000481152 PPEF1O14829 653 aaPredicted RBP9.66□□□□□ -0.86
CHCHD3-205ENST00000481152 FAM160A2Q8N612 972 aaPredicted RBP9.66□□□□□ -0.86
CHCHD3-205ENST00000481152 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
CHCHD3-205ENST00000481152 BEGAINQ9BUH8 593 aa9.65□□□□□ -0.86
CHCHD3-205ENST00000481152 MS4A1P11836 297 aa9.64□□□□□ -0.87
CHCHD3-205ENST00000481152 GUCA2AQ02747 115 aa9.64□□□□□ -0.87
CHCHD3-205ENST00000481152 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
CHCHD3-205ENST00000481152 MSS51Q4VC12 460 aa9.63□□□□□ -0.87
CHCHD3-205ENST00000481152 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
CHCHD3-205ENST00000481152 PRDM9Q9NQV7 894 aa9.63□□□□□ -0.87
CHCHD3-205ENST00000481152 EMID1Q96A84 441 aaPredicted RBP9.63□□□□□ -0.87
CHCHD3-205ENST00000481152 FDX1P10109 184 aa9.61□□□□□ -0.87
CHCHD3-205ENST00000481152 SLC19A1P41440 591 aa9.61□□□□□ -0.87
CHCHD3-205ENST00000481152 PLA2G2CQ5R387 149 aa9.61□□□□□ -0.87
CHCHD3-205ENST00000481152 USB1Q9BQ65 265 aaKnown RBP9.61□□□□□ -0.87
CHCHD3-205ENST00000481152 MOXD2PA6NHM9 499 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms