RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ERCC6L2Q5T890 1561 aa18.62■□□□□ 0.57
NR1H3-220ENST00000481020 HNRNPMP52272 730 aaKnown RBP eCLIP18.62■□□□□ 0.57
NR1H3-220ENST00000481020 AAMPQ13685 434 aa18.62■□□□□ 0.57
NR1H3-220ENST00000481020 C8orf34Q49A92 452 aa18.62■□□□□ 0.57
NR1H3-220ENST00000481020 TRMT2AQ8IZ69 625 aaKnown RBP18.62■□□□□ 0.57
NR1H3-220ENST00000481020 SCAPERQ9BY12 1400 aa18.62■□□□□ 0.57
NR1H3-220ENST00000481020 ADAMTS8Q9UP79 889 aa18.61■□□□□ 0.57
NR1H3-220ENST00000481020 ASXL1Q8IXJ9 1541 aa18.61■□□□□ 0.57
NR1H3-220ENST00000481020 IQGAP1P46940 1657 aa18.61■□□□□ 0.57
NR1H3-220ENST00000481020 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
NR1H3-220ENST00000481020 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
NR1H3-220ENST00000481020 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
NR1H3-220ENST00000481020 SLFN5Q08AF3 891 aa18.59■□□□□ 0.57
NR1H3-220ENST00000481020 PLEKHH1Q9ULM0 1364 aa18.59■□□□□ 0.57
NR1H3-220ENST00000481020 NKTRP30414 1462 aaKnown RBP18.59■□□□□ 0.57
NR1H3-220ENST00000481020 PRKCSHP14314 528 aaPredicted RBP18.58■□□□□ 0.57
NR1H3-220ENST00000481020 OSCARQ8IYS5 282 aa18.57■□□□□ 0.56
NR1H3-220ENST00000481020 NEURL4Q96JN8 1562 aa18.57■□□□□ 0.56
NR1H3-220ENST00000481020 MAPK8IP3Q9UPT6 1336 aa18.56■□□□□ 0.56
NR1H3-220ENST00000481020 SCAF11Q99590 1463 aaKnown RBP18.56■□□□□ 0.56
NR1H3-220ENST00000481020 AMER1Q5JTC6 1135 aaPredicted RBP18.56■□□□□ 0.56
NR1H3-220ENST00000481020 MADDQ8WXG6 1647 aa18.56■□□□□ 0.56
NR1H3-220ENST00000481020 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
NR1H3-220ENST00000481020 C20orf194Q5TEA3 1177 aa18.55■□□□□ 0.56
NR1H3-220ENST00000481020 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
NR1H3-220ENST00000481020 CGNL1Q0VF96 1302 aa18.55■□□□□ 0.56
NR1H3-220ENST00000481020 PDE3AQ14432 1141 aa18.54■□□□□ 0.56
NR1H3-220ENST00000481020 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
NR1H3-220ENST00000481020 E9PSI1 815 aa18.54■□□□□ 0.56
NR1H3-220ENST00000481020 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
NR1H3-220ENST00000481020 KIAA1210Q9ULL0 1709 aa18.53■□□□□ 0.56
NR1H3-220ENST00000481020 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-220ENST00000481020 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
NR1H3-220ENST00000481020 TRPM2O94759 1503 aa18.51■□□□□ 0.55
NR1H3-220ENST00000481020 BECN1Q14457 450 aa18.51■□□□□ 0.55
NR1H3-220ENST00000481020 FAM43AQ8N2R8 423 aa18.51■□□□□ 0.55
NR1H3-220ENST00000481020 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
NR1H3-220ENST00000481020 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
NR1H3-220ENST00000481020 PTPRTO14522 1441 aa18.47■□□□□ 0.55
NR1H3-220ENST00000481020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.46■□□□□ 0.55
NR1H3-220ENST00000481020 UHRF1BP1LA0JNW5 1464 aa18.46■□□□□ 0.55
NR1H3-220ENST00000481020 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
NR1H3-220ENST00000481020 RSPH6AQ9H0K4 717 aa18.46■□□□□ 0.55
NR1H3-220ENST00000481020 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
NR1H3-220ENST00000481020 MYOM1P52179 1685 aa18.45■□□□□ 0.54
NR1H3-220ENST00000481020 CEP152O94986 1710 aa18.45■□□□□ 0.54
NR1H3-220ENST00000481020 KDM5AP29375 1690 aaKnown RBP18.45■□□□□ 0.54
NR1H3-220ENST00000481020 L1TD1Q5T7N2 865 aaKnown RBP18.43■□□□□ 0.54
NR1H3-220ENST00000481020 RTEL1-TNFRSF6BF6WH68 1400 aa18.43■□□□□ 0.54
NR1H3-220ENST00000481020 RTN4Q9NQC3 1192 aaKnown RBP18.43■□□□□ 0.54
NR1H3-220ENST00000481020 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
NR1H3-220ENST00000481020 FRAT2O75474 233 aaPredicted RBP18.41■□□□□ 0.54
NR1H3-220ENST00000481020 PMFBP1Q8TBY8 1022 aa18.41■□□□□ 0.54
NR1H3-220ENST00000481020 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
NR1H3-220ENST00000481020 SKAP1Q86WV1 359 aa18.4■□□□□ 0.54
NR1H3-220ENST00000481020 CLUAP1Q96AJ1 413 aa18.4■□□□□ 0.54
NR1H3-220ENST00000481020 SBNO2Q9Y2G9 1366 aa18.4■□□□□ 0.54
NR1H3-220ENST00000481020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.541e-6■■□□□ 11.6
NR1H3-220ENST00000481020 UPF2Q9HAU5 1272 aaKnown RBP18.4■□□□□ 0.54
NR1H3-220ENST00000481020 MYOM2P54296 1465 aa18.39■□□□□ 0.54
NR1H3-220ENST00000481020 USP19O94966 1318 aa18.39■□□□□ 0.53
NR1H3-220ENST00000481020 PLCH2O75038 1416 aa18.39■□□□□ 0.53
NR1H3-220ENST00000481020 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.53
NR1H3-220ENST00000481020 RGS3P49796 1198 aa18.39■□□□□ 0.53
NR1H3-220ENST00000481020 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
NR1H3-220ENST00000481020 DEPDC5O75140 1603 aa18.38■□□□□ 0.53
NR1H3-220ENST00000481020 ABCC1P33527 1531 aa18.37■□□□□ 0.53
NR1H3-220ENST00000481020 APAF1O14727 1248 aa18.36■□□□□ 0.53
NR1H3-220ENST00000481020 TET3O43151 1660 aa18.36■□□□□ 0.53
NR1H3-220ENST00000481020 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
NR1H3-220ENST00000481020 KANK1Q14678 1352 aa18.35■□□□□ 0.53
NR1H3-220ENST00000481020 ZCCHC11Q5TAX3 1644 aaKnown RBP18.35■□□□□ 0.53
NR1H3-220ENST00000481020 MYO3AQ8NEV4 1616 aa18.35■□□□□ 0.53
NR1H3-220ENST00000481020 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
NR1H3-220ENST00000481020 UBE2Q2Q8WVN8 375 aa18.33■□□□□ 0.52
NR1H3-220ENST00000481020 IGHDP01880 384 aa18.32■□□□□ 0.52
NR1H3-220ENST00000481020 VWDEQ8N2E2 1590 aa18.32■□□□□ 0.52
NR1H3-220ENST00000481020 CLTCL1P53675 1640 aa18.32■□□□□ 0.52
NR1H3-220ENST00000481020 BCAR3O75815 825 aa18.32■□□□□ 0.52
NR1H3-220ENST00000481020 CCDC27Q2M243 656 aa18.32■□□□□ 0.52
NR1H3-220ENST00000481020 WDR63Q8IWG1 891 aa18.32■□□□□ 0.52
NR1H3-220ENST00000481020 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
NR1H3-220ENST00000481020 TBC1D32Q96NH3 1257 aa18.31■□□□□ 0.52
NR1H3-220ENST00000481020 ANTXR1Q9H6X2 564 aa18.31■□□□□ 0.52
NR1H3-220ENST00000481020 WWC1Q8IX03 1113 aa18.3■□□□□ 0.52
NR1H3-220ENST00000481020 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
NR1H3-220ENST00000481020 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
NR1H3-220ENST00000481020 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-220ENST00000481020 CANXP27824 592 aaKnown RBP18.29■□□□□ 0.52
NR1H3-220ENST00000481020 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
NR1H3-220ENST00000481020 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
NR1H3-220ENST00000481020 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
NR1H3-220ENST00000481020 IQSEC2Q5JU85 1478 aa18.28■□□□□ 0.52
NR1H3-220ENST00000481020 RWDD1Q9H446 243 aaPredicted RBP18.28■□□□□ 0.52
NR1H3-220ENST00000481020 SETBP1Q9Y6X0 1596 aa18.27■□□□□ 0.52
NR1H3-220ENST00000481020 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
NR1H3-220ENST00000481020 NRXN1Q9ULB1 1477 aa18.27■□□□□ 0.52
NR1H3-220ENST00000481020 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
NR1H3-220ENST00000481020 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.51
NR1H3-220ENST00000481020 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms