RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 FCHSD2O94868 740 aa7.14□□□□□ -1.27
UBE2F-221ENST00000480828 ZNF516Q92618 1163 aa7.14□□□□□ -1.27
UBE2F-221ENST00000480828 TMEM134Q9H6X4 195 aa7.14□□□□□ -1.27
UBE2F-221ENST00000480828 FECHP22830 423 aa7.13□□□□□ -1.27
UBE2F-221ENST00000480828 ZC3H15Q8WU90 426 aaKnown RBP7.13□□□□□ -1.27
UBE2F-221ENST00000480828 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
UBE2F-221ENST00000480828 RNF40O75150 1001 aa7.12□□□□□ -1.27
UBE2F-221ENST00000480828 DNAJB2P25686 324 aa7.12□□□□□ -1.27
UBE2F-221ENST00000480828 SLF2Q8IX21 1173 aa7.12□□□□□ -1.27
UBE2F-221ENST00000480828 PXYLP1Q8TE99 480 aa7.11□□□□□ -1.27
UBE2F-221ENST00000480828 IL21Q9HBE4 155 aa7.11□□□□□ -1.27
UBE2F-221ENST00000480828 SLC10A3P09131 477 aa7.1□□□□□ -1.27
UBE2F-221ENST00000480828 HIC1Q14526 733 aa7.1□□□□□ -1.27
UBE2F-221ENST00000480828 NEUROD2Q15784 382 aa7.1□□□□□ -1.27
UBE2F-221ENST00000480828 NKX2-3Q8TAU0 364 aa7.1□□□□□ -1.27
UBE2F-221ENST00000480828 RBM46Q8TBY0 533 aaKnown RBP7.1□□□□□ -1.27
UBE2F-221ENST00000480828 HDGFP51858 240 aaKnown RBP7.09□□□□□ -1.27
UBE2F-221ENST00000480828 SLC24A3Q9HC58 644 aa7.09□□□□□ -1.27
UBE2F-221ENST00000480828 PPP1R18Q6NYC8 613 aa7.08□□□□□ -1.28
UBE2F-221ENST00000480828 METTL3Q86U44 580 aaKnown RBP7.08□□□□□ -1.28
UBE2F-221ENST00000480828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.07□□□□□ -1.28
UBE2F-221ENST00000480828 GNPATO15228 680 aa7.07□□□□□ -1.28
UBE2F-221ENST00000480828 COPS2P61201 443 aa7.07□□□□□ -1.28
UBE2F-221ENST00000480828 NECTIN2Q92692 538 aa7.07□□□□□ -1.28
UBE2F-221ENST00000480828 BLOC1S3Q6QNY0 202 aa7.06□□□□□ -1.28
UBE2F-221ENST00000480828 IRX2Q9BZI1 471 aaPredicted RBP7.06□□□□□ -1.28
UBE2F-221ENST00000480828 ZPR1O75312 459 aa7.05□□□□□ -1.28
UBE2F-221ENST00000480828 OATP04181 439 aa7.05□□□□□ -1.28
UBE2F-221ENST00000480828 SMYD5Q6GMV2 418 aa7.05□□□□□ -1.28
UBE2F-221ENST00000480828 HOMEZQ8IX15 550 aa7.05□□□□□ -1.28
UBE2F-221ENST00000480828 PHOX2BQ99453 314 aa7.05□□□□□ -1.28
UBE2F-221ENST00000480828 DAXXQ9UER7 740 aaPredicted RBP7.05□□□□□ -1.28
UBE2F-221ENST00000480828 ACTN4O43707 911 aaKnown RBP7.04□□□□□ -1.28
UBE2F-221ENST00000480828 SUPT5HO00267 1087 aaKnown RBP7.03□□□□□ -1.28
UBE2F-221ENST00000480828 CFHP08603 1231 aa7.03□□□□□ -1.28
UBE2F-221ENST00000480828 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
UBE2F-221ENST00000480828 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.03□□□□□ -1.28
UBE2F-221ENST00000480828 PCDHB3Q9Y5E6 796 aa7.03□□□□□ -1.28
UBE2F-221ENST00000480828 TLL1O43897 1013 aa7.02□□□□□ -1.29
UBE2F-221ENST00000480828 EMID1Q96A84 441 aaPredicted RBP7.02□□□□□ -1.29
UBE2F-221ENST00000480828 PRR14Q9BWN1 585 aa7.02□□□□□ -1.29
UBE2F-221ENST00000480828 LCE2BO14633 110 aa7.01□□□□□ -1.29
UBE2F-221ENST00000480828 GPIHBP1Q8IV16 184 aa7.01□□□□□ -1.29
UBE2F-221ENST00000480828 ZMYND10O75800 440 aa7□□□□□ -1.29
UBE2F-221ENST00000480828 SLC4A3P48751 1232 aa7□□□□□ -1.29
UBE2F-221ENST00000480828 PRKD2Q9BZL6 878 aa7□□□□□ -1.29
UBE2F-221ENST00000480828 KMT5BQ4FZB7 885 aa6.99□□□□□ -1.29
UBE2F-221ENST00000480828 V9GY48 417 aaPredicted RBP6.99□□□□□ -1.29
UBE2F-221ENST00000480828 RNF223E7ERA6 249 aa6.98□□□□□ -1.29
UBE2F-221ENST00000480828 TMUB1Q9BVT8 246 aa6.98□□□□□ -1.29
UBE2F-221ENST00000480828 PUS10Q3MIT2 529 aaKnown RBP6.96□□□□□ -1.3
UBE2F-221ENST00000480828 S1PR4O95977 384 aa6.95□□□□□ -1.3
UBE2F-221ENST00000480828 MAP2K5Q13163 448 aa6.95□□□□□ -1.3
UBE2F-221ENST00000480828 BARGINQ6ZT62 677 aa6.95□□□□□ -1.3
UBE2F-221ENST00000480828 SCUBE3Q8IX30 993 aa6.95□□□□□ -1.3
UBE2F-221ENST00000480828 GPBP1L1Q9HC44 474 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-221ENST00000480828 PPEF1O14829 653 aaPredicted RBP6.94□□□□□ -1.3
UBE2F-221ENST00000480828 ADH1BP00325 375 aa6.94□□□□□ -1.3
UBE2F-221ENST00000480828 MORN1Q5T089 497 aa6.94□□□□□ -1.3
UBE2F-221ENST00000480828 TRIM67Q6ZTA4 783 aa6.94□□□□□ -1.3
UBE2F-221ENST00000480828 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
UBE2F-221ENST00000480828 DDX11L8A8MPP1 907 aa6.93□□□□□ -1.3
UBE2F-221ENST00000480828 GCGRP47871 477 aa6.93□□□□□ -1.3
UBE2F-221ENST00000480828 FUT2Q10981 343 aa6.93□□□□□ -1.3
UBE2F-221ENST00000480828 PLA2G2CQ5R387 149 aa6.93□□□□□ -1.3
UBE2F-221ENST00000480828 IRF6O14896 467 aa6.92□□□□□ -1.3
UBE2F-221ENST00000480828 NR1I2O75469 434 aa6.92□□□□□ -1.3
UBE2F-221ENST00000480828 GGCXP38435 758 aa6.92□□□□□ -1.3
UBE2F-221ENST00000480828 ANKLE1Q8NAG6 615 aa6.92□□□□□ -1.3
UBE2F-221ENST00000480828 GFRA3O60609 400 aa6.91□□□□□ -1.3
UBE2F-221ENST00000480828 CD46P15529 392 aa6.91□□□□□ -1.3
UBE2F-221ENST00000480828 LIAT1Q6ZQX7 453 aa6.91□□□□□ -1.3
UBE2F-221ENST00000480828 RDH13Q8NBN7 331 aa6.91□□□□□ -1.3
UBE2F-221ENST00000480828 LAPTM4AQ15012 233 aa6.9□□□□□ -1.3
UBE2F-221ENST00000480828 Q6ZNB5 142 aa6.9□□□□□ -1.3
UBE2F-221ENST00000480828 IL27Q8NEV9 243 aa6.9□□□□□ -1.3
UBE2F-221ENST00000480828 CCDC102AQ96A19 550 aa6.9□□□□□ -1.3
UBE2F-221ENST00000480828 AK7Q96M32 723 aa6.9□□□□□ -1.3
UBE2F-221ENST00000480828 SLC27A5Q9Y2P5 690 aa6.9□□□□□ -1.3
UBE2F-221ENST00000480828 NRG2O14511 850 aaPredicted RBP6.89□□□□□ -1.31
UBE2F-221ENST00000480828 ATP6V1AP38606 617 aa6.89□□□□□ -1.31
UBE2F-221ENST00000480828 SLC19A1P41440 591 aa6.89□□□□□ -1.31
UBE2F-221ENST00000480828 SPRYD7Q5W111 196 aa6.89□□□□□ -1.31
UBE2F-221ENST00000480828 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
UBE2F-221ENST00000480828 FAM160A2Q8N612 972 aaPredicted RBP6.89□□□□□ -1.31
UBE2F-221ENST00000480828 SPSB2Q99619 263 aa6.89□□□□□ -1.31
UBE2F-221ENST00000480828 SLC6A16Q9GZN6 736 aa6.89□□□□□ -1.31
UBE2F-221ENST00000480828 MINK1Q8N4C8 1332 aaPredicted RBP6.89□□□□□ -1.31
UBE2F-221ENST00000480828 RSPH4AQ5TD94 716 aa6.88□□□□□ -1.31
UBE2F-221ENST00000480828 KRI1Q8N9T8 703 aaKnown RBP6.88□□□□□ -1.31
UBE2F-221ENST00000480828 RNF19BQ6ZMZ0 732 aa6.87□□□□□ -1.31
UBE2F-221ENST00000480828 REPIN1Q9BWE0 567 aaKnown RBP6.87□□□□□ -1.31
UBE2F-221ENST00000480828 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
UBE2F-221ENST00000480828 MDM2Q00987 491 aaPredicted RBP6.86□□□□□ -1.31
UBE2F-221ENST00000480828 BRICD5Q6PL45 260 aa6.86□□□□□ -1.31
UBE2F-221ENST00000480828 PRDM9Q9NQV7 894 aa6.86□□□□□ -1.31
UBE2F-221ENST00000480828 PDZRN3Q9UPQ7 1066 aa6.86□□□□□ -1.31
UBE2F-221ENST00000480828 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
UBE2F-221ENST00000480828 TRIM66O15016 1216 aa6.85□□□□□ -1.31
UBE2F-221ENST00000480828 GDF9O60383 454 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms