RNA–Protein interactions for RNA: ENST00000480760.1

CTSS-204, Transcript of cathepsin S, humanhuman

TSL 3

Gene CTSS, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-204ENST00000480760 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
CTSS-204ENST00000480760 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
CTSS-204ENST00000480760 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
CTSS-204ENST00000480760 SLC4A5Q9BY07 1137 aa9.23□□□□□ -0.93
CTSS-204ENST00000480760 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
CTSS-204ENST00000480760 AXIN2Q9Y2T1 843 aa9.23□□□□□ -0.93
CTSS-204ENST00000480760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
CTSS-204ENST00000480760 DDRGK1Q96HY6 314 aa9.22□□□□□ -0.93
CTSS-204ENST00000480760 FAM117AQ9C073 453 aa9.22□□□□□ -0.93
CTSS-204ENST00000480760 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
CTSS-204ENST00000480760 RCCD1A6NED2 376 aa9.21□□□□□ -0.94
CTSS-204ENST00000480760 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
CTSS-204ENST00000480760 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
CTSS-204ENST00000480760 NLRP7Q8WX94 980 aa9.21□□□□□ -0.94
CTSS-204ENST00000480760 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
CTSS-204ENST00000480760 C3orf80F5H4A9 247 aa9.2□□□□□ -0.94
CTSS-204ENST00000480760 SSTR3P32745 418 aaPredicted RBP9.2□□□□□ -0.94
CTSS-204ENST00000480760 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
CTSS-204ENST00000480760 RABGEF1Q9UJ41 708 aa9.2□□□□□ -0.94
CTSS-204ENST00000480760 MRC2Q9UBG0 1479 aa9.2□□□□□ -0.94
CTSS-204ENST00000480760 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
CTSS-204ENST00000480760 CFTRP13569 1480 aa9.19□□□□□ -0.94
CTSS-204ENST00000480760 FANCD2Q9BXW9 1451 aa9.19□□□□□ -0.94
CTSS-204ENST00000480760 MS4A1P11836 297 aa9.18□□□□□ -0.94
CTSS-204ENST00000480760 DNAJB2P25686 324 aa9.18□□□□□ -0.94
CTSS-204ENST00000480760 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
CTSS-204ENST00000480760 THOC2Q8NI27 1593 aaKnown RBP9.17□□□□□ -0.94
CTSS-204ENST00000480760 SMAPO00193 183 aa9.17□□□□□ -0.94
CTSS-204ENST00000480760 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
CTSS-204ENST00000480760 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
CTSS-204ENST00000480760 CCDC88BA6NC98 1476 aa9.15□□□□□ -0.94
CTSS-204ENST00000480760 TK2O00142 265 aa9.15□□□□□ -0.94
CTSS-204ENST00000480760 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
CTSS-204ENST00000480760 KIF21AQ7Z4S6 1674 aa9.15□□□□□ -0.94
CTSS-204ENST00000480760 ERICH6Q7L0X2 663 aa9.14□□□□□ -0.95
CTSS-204ENST00000480760 SULF1Q8IWU6 871 aa9.13□□□□□ -0.95
CTSS-204ENST00000480760 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
CTSS-204ENST00000480760 WDR62O43379 1518 aa9.13□□□□□ -0.95
CTSS-204ENST00000480760 SUPT5HO00267 1087 aaKnown RBP9.12□□□□□ -0.95
CTSS-204ENST00000480760 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
CTSS-204ENST00000480760 LSM11P83369 360 aaKnown RBP eCLIP9.12□□□□□ -0.95
CTSS-204ENST00000480760 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
CTSS-204ENST00000480760 SEPT9Q9UHD8 586 aaPredicted RBP9.12□□□□□ -0.95
CTSS-204ENST00000480760 FAM98CQ17RN3 349 aaKnown RBP9.11□□□□□ -0.95
CTSS-204ENST00000480760 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
CTSS-204ENST00000480760 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
CTSS-204ENST00000480760 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
CTSS-204ENST00000480760 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
CTSS-204ENST00000480760 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
CTSS-204ENST00000480760 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
CTSS-204ENST00000480760 RSPH4AQ5TD94 716 aa9.09□□□□□ -0.95
CTSS-204ENST00000480760 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.95
CTSS-204ENST00000480760 CD46P15529 392 aa9.08□□□□□ -0.96
CTSS-204ENST00000480760 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
CTSS-204ENST00000480760 ANKRD13DQ6ZTN6 518 aa9.08□□□□□ -0.96
CTSS-204ENST00000480760 DIXDC1Q155Q3 683 aa9.07□□□□□ -0.96
CTSS-204ENST00000480760 MRPL50Q8N5N7 158 aaKnown RBP9.07□□□□□ -0.96
CTSS-204ENST00000480760 SLC4A3P48751 1232 aa9.06□□□□□ -0.96
CTSS-204ENST00000480760 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
CTSS-204ENST00000480760 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
CTSS-204ENST00000480760 URB2Q14146 1524 aaKnown RBP9.05□□□□□ -0.96
CTSS-204ENST00000480760 ABCC8Q09428 1581 aa9.05□□□□□ -0.96
CTSS-204ENST00000480760 HRO43593 1189 aa9.05□□□□□ -0.96
CTSS-204ENST00000480760 SKIV2LQ15477 1246 aaKnown RBP9.05□□□□□ -0.96
CTSS-204ENST00000480760 C14orf37Q86TY3 774 aa9.05□□□□□ -0.96
CTSS-204ENST00000480760 RDH13Q8NBN7 331 aa9.05□□□□□ -0.96
CTSS-204ENST00000480760 ZFRQ96KR1 1074 aaKnown RBP9.05□□□□□ -0.96
CTSS-204ENST00000480760 PCMTD1Q96MG8 357 aaPredicted RBP9.05□□□□□ -0.96
CTSS-204ENST00000480760 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
CTSS-204ENST00000480760 NUTM1Q86Y26 1132 aa9.04□□□□□ -0.96
CTSS-204ENST00000480760 TBC1D2Q9BYX2 928 aa9.04□□□□□ -0.96
CTSS-204ENST00000480760 SLF2Q8IX21 1173 aa9.03□□□□□ -0.96
CTSS-204ENST00000480760 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
CTSS-204ENST00000480760 SPIRE2Q8WWL2 714 aa9.02□□□□□ -0.97
CTSS-204ENST00000480760 POLR3EQ9NVU0 708 aa9.02□□□□□ -0.97
CTSS-204ENST00000480760 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
CTSS-204ENST00000480760 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
CTSS-204ENST00000480760 SLC10A3P09131 477 aa9.01□□□□□ -0.97
CTSS-204ENST00000480760 GCGRP47871 477 aa9.01□□□□□ -0.97
CTSS-204ENST00000480760 ATP1B4Q9UN42 357 aaPredicted RBP9.01□□□□□ -0.97
CTSS-204ENST00000480760 TOPBP1Q92547 1522 aa9□□□□□ -0.97
CTSS-204ENST00000480760 PRDM2Q13029 1718 aa9□□□□□ -0.97
CTSS-204ENST00000480760 KDM4AO75164 1064 aa8.99□□□□□ -0.97
CTSS-204ENST00000480760 LRCH3Q96II8 777 aa8.99□□□□□ -0.97
CTSS-204ENST00000480760 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
CTSS-204ENST00000480760 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
CTSS-204ENST00000480760 DNMBPQ6XZF7 1577 aa8.99□□□□□ -0.97
CTSS-204ENST00000480760 RNF40O75150 1001 aa8.98□□□□□ -0.97
CTSS-204ENST00000480760 USP46P62068 366 aa8.98□□□□□ -0.97
CTSS-204ENST00000480760 PROCA1Q8NCQ7 364 aaPredicted RBP8.98□□□□□ -0.97
CTSS-204ENST00000480760 ANKK1Q8NFD2 765 aa8.98□□□□□ -0.97
CTSS-204ENST00000480760 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.98□□□□□ -0.97
CTSS-204ENST00000480760 CLK2P49760 499 aaKnown RBP8.97□□□□□ -0.97
CTSS-204ENST00000480760 POTEGQ6S5H5 508 aa8.97□□□□□ -0.97
CTSS-204ENST00000480760 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
CTSS-204ENST00000480760 NECTIN2Q92692 538 aa8.97□□□□□ -0.97
CTSS-204ENST00000480760 SPTLC1O15269 473 aa8.96□□□□□ -0.98
CTSS-204ENST00000480760 MOXD2PA6NHM9 499 aa8.95□□□□□ -0.98
CTSS-204ENST00000480760 POTEMA6NI47 508 aa8.95□□□□□ -0.98
CTSS-204ENST00000480760 GJA5P36382 358 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms