RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CLUAP1Q96AJ1 413 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 KDM2AQ9Y2K7 1162 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 DISP3Q9P2K9 1392 aa13.56□□□□□ -0.24
SIK3-210ENST00000480468 NUP153P49790 1475 aaKnown RBP13.55□□□□□ -0.24
SIK3-210ENST00000480468 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
SIK3-210ENST00000480468 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
SIK3-210ENST00000480468 SCAPERQ9BY12 1400 aa13.55□□□□□ -0.24
SIK3-210ENST00000480468 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
SIK3-210ENST00000480468 PIK3C2GO75747 1445 aa13.55□□□□□ -0.24
SIK3-210ENST00000480468 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
SIK3-210ENST00000480468 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
SIK3-210ENST00000480468 TRIM44Q96DX7 344 aaPredicted RBP13.54□□□□□ -0.24
SIK3-210ENST00000480468 GZF1Q9H116 711 aaPredicted RBP13.54□□□□□ -0.24
SIK3-210ENST00000480468 GPATCH8Q9UKJ3 1502 aaKnown RBP13.54□□□□□ -0.24
SIK3-210ENST00000480468 E9PSI1 815 aa13.54□□□□□ -0.24
SIK3-210ENST00000480468 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
SIK3-210ENST00000480468 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
SIK3-210ENST00000480468 ARXQ96QS3 562 aa13.53□□□□□ -0.24
SIK3-210ENST00000480468 CFDP1Q9UEE9 299 aaPredicted RBP13.53□□□□□ -0.24
SIK3-210ENST00000480468 EIF2AK4Q9P2K8 1649 aaKnown RBP13.53□□□□□ -0.24
SIK3-210ENST00000480468 MAP7D2Q96T17 732 aa13.52□□□□□ -0.24
SIK3-210ENST00000480468 TMF1P82094 1093 aa13.52□□□□□ -0.25
SIK3-210ENST00000480468 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.25
SIK3-210ENST00000480468 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
SIK3-210ENST00000480468 NUP160Q12769 1436 aa13.51□□□□□ -0.25
SIK3-210ENST00000480468 NCOA3Q9Y6Q9 1424 aa13.51□□□□□ -0.25
SIK3-210ENST00000480468 BCAR3O75815 825 aa13.51□□□□□ -0.25
SIK3-210ENST00000480468 PTMSP20962 102 aa13.51□□□□□ -0.25
SIK3-210ENST00000480468 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
SIK3-210ENST00000480468 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
SIK3-210ENST00000480468 WDR7Q9Y4E6 1490 aa13.49□□□□□ -0.25
SIK3-210ENST00000480468 OFD1O75665 1012 aa13.49□□□□□ -0.25
SIK3-210ENST00000480468 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
SIK3-210ENST00000480468 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
SIK3-210ENST00000480468 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 PPP1R9BQ96SB3 815 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 C9orf84Q5VXU9 1444 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 DDIT3P35638 169 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
SIK3-210ENST00000480468 CCDC141Q6ZP82 1450 aa13.47□□□□□ -0.25
SIK3-210ENST00000480468 NBPF1Q3BBV0 1214 aa13.47□□□□□ -0.25
SIK3-210ENST00000480468 CIZ1Q9ULV3 898 aaPredicted RBP13.47□□□□□ -0.25
SIK3-210ENST00000480468 SYNMO15061 1565 aa13.47□□□□□ -0.25
SIK3-210ENST00000480468 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
SIK3-210ENST00000480468 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.47□□□□□ -0.25
SIK3-210ENST00000480468 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
SIK3-210ENST00000480468 CDC42BPAQ5VT25 1732 aa13.46□□□□□ -0.25
SIK3-210ENST00000480468 A2MP01023 1474 aa13.46□□□□□ -0.25
SIK3-210ENST00000480468 ARID3CA6NKF2 412 aa13.46□□□□□ -0.25
SIK3-210ENST00000480468 ZSCAN30Q86W11 494 aa13.46□□□□□ -0.25
SIK3-210ENST00000480468 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.25
SIK3-210ENST00000480468 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.26
SIK3-210ENST00000480468 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
SIK3-210ENST00000480468 C22orf23Q9BZE7 217 aa13.45□□□□□ -0.26
SIK3-210ENST00000480468 PRG4Q92954 1404 aaPredicted RBP13.45□□□□□ -0.26
SIK3-210ENST00000480468 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
SIK3-210ENST00000480468 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
SIK3-210ENST00000480468 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
SIK3-210ENST00000480468 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
SIK3-210ENST00000480468 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
SIK3-210ENST00000480468 HSCBQ8IWL3 235 aa13.44□□□□□ -0.26
SIK3-210ENST00000480468 DISP1Q96F81 1524 aa13.44□□□□□ -0.26
SIK3-210ENST00000480468 IBTKQ9P2D0 1353 aaPredicted RBP13.44□□□□□ -0.26
SIK3-210ENST00000480468 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
SIK3-210ENST00000480468 GBP4Q96PP9 640 aa13.44□□□□□ -0.26
SIK3-210ENST00000480468 MTERF4Q7Z6M4 381 aaKnown RBP13.43□□□□□ -0.26
SIK3-210ENST00000480468 GAS2L3Q86XJ1 694 aa13.43□□□□□ -0.26
SIK3-210ENST00000480468 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
SIK3-210ENST00000480468 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
SIK3-210ENST00000480468 APAF1O14727 1248 aa13.43□□□□□ -0.26
SIK3-210ENST00000480468 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
SIK3-210ENST00000480468 RIPK4P57078 832 aa13.43□□□□□ -0.26
SIK3-210ENST00000480468 HS1BP3Q53T59 392 aa13.43□□□□□ -0.26
SIK3-210ENST00000480468 SNX21Q969T3 373 aa13.43□□□□□ -0.26
SIK3-210ENST00000480468 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
SIK3-210ENST00000480468 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
SIK3-210ENST00000480468 PCDHB15Q9Y5E8 787 aa13.41□□□□□ -0.26
SIK3-210ENST00000480468 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
SIK3-210ENST00000480468 ARHGEF5Q12774 1597 aa13.41□□□□□ -0.26
SIK3-210ENST00000480468 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
SIK3-210ENST00000480468 AEBP2Q6ZN18 517 aaPredicted RBP13.4□□□□□ -0.26
SIK3-210ENST00000480468 MYO5CQ9NQX4 1742 aa13.4□□□□□ -0.26
SIK3-210ENST00000480468 RAB3GAP1Q15042 981 aa13.4□□□□□ -0.26
SIK3-210ENST00000480468 TNPO1Q92973 898 aaKnown RBP13.4□□□□□ -0.26
SIK3-210ENST00000480468 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
SIK3-210ENST00000480468 PLA2R1Q13018 1463 aa13.39□□□□□ -0.27
SIK3-210ENST00000480468 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
SIK3-210ENST00000480468 MSNP26038 577 aaKnown RBP13.39□□□□□ -0.27
SIK3-210ENST00000480468 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
SIK3-210ENST00000480468 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
SIK3-210ENST00000480468 ARHGAP31Q2M1Z3 1444 aa13.38□□□□□ -0.27
SIK3-210ENST00000480468 NASPP49321 788 aaPredicted RBP13.38□□□□□ -0.27
SIK3-210ENST00000480468 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
SIK3-210ENST00000480468 RARSP54136 660 aaKnown RBP13.37□□□□□ -0.27
SIK3-210ENST00000480468 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
SIK3-210ENST00000480468 ATP10AO60312 1499 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms