RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 GPS2Q13227 327 aa16.69■□□□□ 0.26
MCF2L-225ENST00000480321 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
MCF2L-225ENST00000480321 A0A0U1RQG5 324 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-225ENST00000480321 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-225ENST00000480321 BECN2A8MW95 431 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 EVA1CP58658 441 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 MARCH6O60337 910 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 CREBRFQ8IUR6 639 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
MCF2L-225ENST00000480321 TPM1P09493 284 aa16.66■□□□□ 0.26
MCF2L-225ENST00000480321 APAF1O14727 1248 aa16.66■□□□□ 0.26
MCF2L-225ENST00000480321 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
MCF2L-225ENST00000480321 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-225ENST00000480321 DIAPH3Q9NSV4 1193 aa16.65■□□□□ 0.26
MCF2L-225ENST00000480321 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-225ENST00000480321 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
MCF2L-225ENST00000480321 INTS3Q68E01 1043 aaKnown RBP16.64■□□□□ 0.25
MCF2L-225ENST00000480321 WWC1Q8IX03 1113 aa16.64■□□□□ 0.25
MCF2L-225ENST00000480321 CCDC70Q6NSX1 233 aa16.63■□□□□ 0.25
MCF2L-225ENST00000480321 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
MCF2L-225ENST00000480321 TEFQ10587 303 aa16.63■□□□□ 0.25
MCF2L-225ENST00000480321 KIF7Q2M1P5 1343 aa16.63■□□□□ 0.25
MCF2L-225ENST00000480321 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
MCF2L-225ENST00000480321 TPM2P07951 284 aa16.63■□□□□ 0.25
MCF2L-225ENST00000480321 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-225ENST00000480321 KIF21BO75037 1637 aa16.62■□□□□ 0.25
MCF2L-225ENST00000480321 BCL2L13Q9BXK5 485 aa16.62■□□□□ 0.25
MCF2L-225ENST00000480321 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
MCF2L-225ENST00000480321 RNF20Q5VTR2 975 aa16.61■□□□□ 0.25
MCF2L-225ENST00000480321 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
MCF2L-225ENST00000480321 TPD52L1Q16890 204 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-225ENST00000480321 FOXD4L5Q5VV16 416 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-225ENST00000480321 FOXD4L4Q8WXT5 416 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-225ENST00000480321 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
MCF2L-225ENST00000480321 MSH5O43196 834 aa16.61■□□□□ 0.25
MCF2L-225ENST00000480321 TTC5Q8N0Z6 440 aa16.61■□□□□ 0.25
MCF2L-225ENST00000480321 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-225ENST00000480321 MRE11P49959 708 aa16.6■□□□□ 0.25
MCF2L-225ENST00000480321 HSP90AB4PQ58FF6 505 aa16.6■□□□□ 0.25
MCF2L-225ENST00000480321 MTERF4Q7Z6M4 381 aaKnown RBP16.59■□□□□ 0.25
MCF2L-225ENST00000480321 CEP89Q96ST8 783 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 HOOK1Q9UJC3 728 aaKnown RBP16.59■□□□□ 0.25
MCF2L-225ENST00000480321 GNAI1P63096 354 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 SYNE3Q6ZMZ3 975 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 C22orf23Q9BZE7 217 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 PTPRGP23470 1445 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
MCF2L-225ENST00000480321 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
MCF2L-225ENST00000480321 FAM43AQ8N2R8 423 aa16.58■□□□□ 0.24
MCF2L-225ENST00000480321 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
MCF2L-225ENST00000480321 MAP7D2Q96T17 732 aa16.57■□□□□ 0.24
MCF2L-225ENST00000480321 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
MCF2L-225ENST00000480321 RIPK4P57078 832 aa16.57■□□□□ 0.24
MCF2L-225ENST00000480321 TEX35Q5T0J7 233 aa16.57■□□□□ 0.24
MCF2L-225ENST00000480321 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
MCF2L-225ENST00000480321 CASKIN1Q8WXD9 1431 aa16.57■□□□□ 0.24
MCF2L-225ENST00000480321 NFKBIBQ15653 356 aa16.56■□□□□ 0.24
MCF2L-225ENST00000480321 TRIM29Q14134 588 aa16.56■□□□□ 0.24
MCF2L-225ENST00000480321 ANKRD20A12PQ8NF67 263 aa16.56■□□□□ 0.24
MCF2L-225ENST00000480321 IGF1RP08069 1367 aa16.56■□□□□ 0.24
MCF2L-225ENST00000480321 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
MCF2L-225ENST00000480321 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
MCF2L-225ENST00000480321 CDC45O75419 566 aa16.55■□□□□ 0.24
MCF2L-225ENST00000480321 C9orf78Q9NZ63 289 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-225ENST00000480321 PES1O00541 588 aaKnown RBP16.55■□□□□ 0.24
MCF2L-225ENST00000480321 ZNF771Q7L3S4 317 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-225ENST00000480321 IFIT2P09913 472 aaKnown RBP16.54■□□□□ 0.24
MCF2L-225ENST00000480321 NOL10Q9BSC4 688 aaKnown RBP16.54■□□□□ 0.24
MCF2L-225ENST00000480321 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
MCF2L-225ENST00000480321 CCDC39Q9UFE4 941 aa16.54■□□□□ 0.24
MCF2L-225ENST00000480321 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
MCF2L-225ENST00000480321 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
MCF2L-225ENST00000480321 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
MCF2L-225ENST00000480321 LETM1O95202 739 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-225ENST00000480321 ERC2O15083 957 aa16.54■□□□□ 0.24
MCF2L-225ENST00000480321 AMOTL1Q8IY63 956 aa16.53■□□□□ 0.24
MCF2L-225ENST00000480321 SMC3Q9UQE7 1217 aa16.53■□□□□ 0.24
MCF2L-225ENST00000480321 IPO7O95373 1038 aaKnown RBP16.53■□□□□ 0.24
MCF2L-225ENST00000480321 PSME1Q06323 249 aa16.53■□□□□ 0.24
MCF2L-225ENST00000480321 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-225ENST00000480321 TRIM34Q9BYJ4 488 aa16.52■□□□□ 0.24
MCF2L-225ENST00000480321 SASS6Q6UVJ0 657 aa16.52■□□□□ 0.23
MCF2L-225ENST00000480321 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.23
MCF2L-225ENST00000480321 MCTP1Q6DN14 999 aa16.52■□□□□ 0.23
MCF2L-225ENST00000480321 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
MCF2L-225ENST00000480321 RAD21O60216 631 aa16.51■□□□□ 0.23
MCF2L-225ENST00000480321 BICD2Q8TD16 824 aa16.51■□□□□ 0.23
MCF2L-225ENST00000480321 ARGLU1Q9NWB6 273 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-225ENST00000480321 ANKRD50Q9ULJ7 1429 aa16.51■□□□□ 0.23
MCF2L-225ENST00000480321 MCM2P49736 904 aa16.5■□□□□ 0.23
MCF2L-225ENST00000480321 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
MCF2L-225ENST00000480321 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
MCF2L-225ENST00000480321 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
MCF2L-225ENST00000480321 CCAR2Q8N163 923 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms