RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SPATA31D1Q6ZQQ2 1576 aa15.37■□□□□ 0.05
VTI1A-204ENST00000480057 IQGAP1P46940 1657 aa15.37■□□□□ 0.05
VTI1A-204ENST00000480057 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
VTI1A-204ENST00000480057 ZFYVE9O95405 1425 aa15.35■□□□□ 0.05
VTI1A-204ENST00000480057 CFAP65Q6ZU64 1925 aaKnown RBP15.35■□□□□ 0.05
VTI1A-204ENST00000480057 SETBP1Q9Y6X0 1596 aa15.35■□□□□ 0.05
VTI1A-204ENST00000480057 SCAF11Q99590 1463 aaKnown RBP15.34■□□□□ 0.05
VTI1A-204ENST00000480057 C11orf95C9JLR9 678 aaPredicted RBP15.34■□□□□ 0.05
VTI1A-204ENST00000480057 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
VTI1A-204ENST00000480057 NBPF1Q3BBV0 1214 aa15.33■□□□□ 0.04
VTI1A-204ENST00000480057 NEXMIFQ5QGS0 1516 aa15.33■□□□□ 0.04
VTI1A-204ENST00000480057 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
VTI1A-204ENST00000480057 ANP32CO43423 234 aa15.32■□□□□ 0.04
VTI1A-204ENST00000480057 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
VTI1A-204ENST00000480057 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
VTI1A-204ENST00000480057 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
VTI1A-204ENST00000480057 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
VTI1A-204ENST00000480057 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
VTI1A-204ENST00000480057 IDI1Q13907 227 aa15.3■□□□□ 0.04
VTI1A-204ENST00000480057 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
VTI1A-204ENST00000480057 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
VTI1A-204ENST00000480057 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
VTI1A-204ENST00000480057 CHGAP10645 457 aaKnown RBP15.28■□□□□ 0.04
VTI1A-204ENST00000480057 KDM5AP29375 1690 aaKnown RBP15.28■□□□□ 0.04
VTI1A-204ENST00000480057 ZMYM3Q14202 1370 aa15.27■□□□□ 0.04
VTI1A-204ENST00000480057 MYO3AQ8NEV4 1616 aa15.27■□□□□ 0.03
VTI1A-204ENST00000480057 TESK2Q96S53 571 aa15.26■□□□□ 0.03
VTI1A-204ENST00000480057 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
VTI1A-204ENST00000480057 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-204ENST00000480057 MYO5BQ9ULV0 1848 aa15.24■□□□□ 0.03
VTI1A-204ENST00000480057 ADGRB1O14514 1584 aa15.24■□□□□ 0.03
VTI1A-204ENST00000480057 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
VTI1A-204ENST00000480057 TMF1P82094 1093 aa15.24■□□□□ 0.03
VTI1A-204ENST00000480057 MLECQ14165 292 aa15.24■□□□□ 0.03
VTI1A-204ENST00000480057 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
VTI1A-204ENST00000480057 SBNO2Q9Y2G9 1366 aa15.24■□□□□ 0.03
VTI1A-204ENST00000480057 CDCA8Q53HL2 280 aa15.23■□□□□ 0.03
VTI1A-204ENST00000480057 A2ML1A8K2U0 1454 aa15.22■□□□□ 0.03
VTI1A-204ENST00000480057 TNRQ92752 1358 aa15.21■□□□□ 0.02
VTI1A-204ENST00000480057 FER1L4A9Z1Z3 1794 aa15.19■□□□□ 0.02
VTI1A-204ENST00000480057 KTN1Q86UP2 1357 aaKnown RBP15.19■□□□□ 0.02
VTI1A-204ENST00000480057 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
VTI1A-204ENST00000480057 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
VTI1A-204ENST00000480057 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
VTI1A-204ENST00000480057 PRKRIP1Q9H875 184 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-204ENST00000480057 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
VTI1A-204ENST00000480057 C3P01024 1663 aa15.16■□□□□ 0.02
VTI1A-204ENST00000480057 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
VTI1A-204ENST00000480057 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
VTI1A-204ENST00000480057 ADRA2BP18089 450 aa15.15■□□□□ 0.02
VTI1A-204ENST00000480057 HDGFP51858 240 aaKnown RBP15.15■□□□□ 0.02
VTI1A-204ENST00000480057 UBR1Q8IWV7 1749 aa15.14■□□□□ 0.01
VTI1A-204ENST00000480057 ARHGEF28Q8N1W1 1705 aaKnown RBP15.14■□□□□ 0.01
VTI1A-204ENST00000480057 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
VTI1A-204ENST00000480057 ASXL1Q8IXJ9 1541 aa15.13■□□□□ 0.01
VTI1A-204ENST00000480057 PUS7Q96PZ0 661 aaKnown RBP15.13■□□□□ 0.01
VTI1A-204ENST00000480057 POLR3GLQ9BT43 218 aa15.13■□□□□ 0.01
VTI1A-204ENST00000480057 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
VTI1A-204ENST00000480057 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
VTI1A-204ENST00000480057 SETD1AO15047 1707 aaKnown RBP15.1■□□□□ 0.01
VTI1A-204ENST00000480057 DLC1Q96QB1 1528 aa15.1■□□□□ 0.01
VTI1A-204ENST00000480057 TMEM2Q9UHN6 1383 aa15.1■□□□□ 0.01
VTI1A-204ENST00000480057 MYOM1P52179 1685 aa15.09■□□□□ 0.01
VTI1A-204ENST00000480057 RALBP1Q15311 655 aa15.09■□□□□ 0.01
VTI1A-204ENST00000480057 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
VTI1A-204ENST00000480057 ADAMTSL3P82987 1691 aa15.08■□□□□ 0
VTI1A-204ENST00000480057 YTHDC2Q9H6S0 1430 aaKnown RBP15.08■□□□□ 0
VTI1A-204ENST00000480057 NRXN3Q9Y4C0 1643 aa15.07■□□□□ 0
VTI1A-204ENST00000480057 PER1O15534 1290 aaPredicted RBP15.07■□□□□ 0
VTI1A-204ENST00000480057 NUTM2DQ5VT03 806 aaPredicted RBP15.07■□□□□ 0
VTI1A-204ENST00000480057 TMEM132EQ6IEE7 984 aa15.07■□□□□ 0
VTI1A-204ENST00000480057 TRAK1Q9UPV9 953 aa15.07■□□□□ 0
VTI1A-204ENST00000480057 PTPRMP28827 1452 aa15.07■□□□□ 0
VTI1A-204ENST00000480057 SLIT1O75093 1534 aa15.07■□□□□ 0
VTI1A-204ENST00000480057 LRPPRCP42704 1394 aaKnown RBP15.06■□□□□ 0
VTI1A-204ENST00000480057 NPC1L1Q9UHC9 1359 aa15.06■□□□□ 0
VTI1A-204ENST00000480057 ARHGAP23Q9P227 1491 aa15.06■□□□□ 0
VTI1A-204ENST00000480057 PANK3Q9H999 370 aa15.05■□□□□ -0
VTI1A-204ENST00000480057 PARD3Q8TEW0 1356 aa15.05■□□□□ -0
VTI1A-204ENST00000480057 KNDC1Q76NI1 1749 aa15.05■□□□□ -0
VTI1A-204ENST00000480057 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
VTI1A-204ENST00000480057 ABCC11Q96J66 1382 aa15.03■□□□□ -0
VTI1A-204ENST00000480057 PLEKHG1Q9ULL1 1385 aa15.03■□□□□ -0
VTI1A-204ENST00000480057 EVC2Q86UK5 1308 aa15.03■□□□□ -0
VTI1A-204ENST00000480057 TECPR2O15040 1411 aa15.02■□□□□ -0
VTI1A-204ENST00000480057 NINLQ9Y2I6 1382 aa15.02■□□□□ -0
VTI1A-204ENST00000480057 MYBBP1AQ9BQG0 1328 aaKnown RBP15.02■□□□□ -0
VTI1A-204ENST00000480057 SIRT1Q96EB6 747 aa15.02■□□□□ -0
VTI1A-204ENST00000480057 TULP4Q9NRJ4 1543 aa15.02□□□□□ -0.01
VTI1A-204ENST00000480057 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
VTI1A-204ENST00000480057 CEBPAP49715 358 aaPredicted RBP15.01□□□□□ -0.01
VTI1A-204ENST00000480057 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
VTI1A-204ENST00000480057 DIP2AQ14689 1571 aa15□□□□□ -0.01
VTI1A-204ENST00000480057 THEMISQ8N1K5 641 aaPredicted RBP15□□□□□ -0.01
VTI1A-204ENST00000480057 MRS2Q9HD23 443 aa15□□□□□ -0.01
VTI1A-204ENST00000480057 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
VTI1A-204ENST00000480057 CEP170BQ9Y4F5 1589 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-204ENST00000480057 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
VTI1A-204ENST00000480057 MED14O60244 1454 aa14.99□□□□□ -0.01
VTI1A-204ENST00000480057 CPS1P31327 1500 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms