RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.32
CCDC58-205ENST00000479899 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.31
CCDC58-205ENST00000479899 KANK4Q5T7N3 995 aaPredicted RBP17.01■□□□□ 0.31
CCDC58-205ENST00000479899 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
CCDC58-205ENST00000479899 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
CCDC58-205ENST00000479899 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
CCDC58-205ENST00000479899 KIF15Q9NS87 1388 aa16.98■□□□□ 0.31
CCDC58-205ENST00000479899 XIRP1Q702N8 1843 aaKnown RBP16.98■□□□□ 0.31
CCDC58-205ENST00000479899 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.31
CCDC58-205ENST00000479899 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
CCDC58-205ENST00000479899 SLIT1O75093 1534 aa16.96■□□□□ 0.3
CCDC58-205ENST00000479899 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
CCDC58-205ENST00000479899 LTKP29376 864 aa16.95■□□□□ 0.3
CCDC58-205ENST00000479899 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
CCDC58-205ENST00000479899 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
CCDC58-205ENST00000479899 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
CCDC58-205ENST00000479899 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
CCDC58-205ENST00000479899 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
CCDC58-205ENST00000479899 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
CCDC58-205ENST00000479899 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
CCDC58-205ENST00000479899 ABCC5O15440 1437 aa16.92■□□□□ 0.3
CCDC58-205ENST00000479899 ARHGAP31Q2M1Z3 1444 aa16.91■□□□□ 0.3
CCDC58-205ENST00000479899 DAPK1P53355 1430 aa16.9■□□□□ 0.3
CCDC58-205ENST00000479899 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
CCDC58-205ENST00000479899 EFCAB6Q5THR3 1501 aa16.9■□□□□ 0.3
CCDC58-205ENST00000479899 KANK1Q14678 1352 aa16.89■□□□□ 0.3
CCDC58-205ENST00000479899 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.29
CCDC58-205ENST00000479899 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
CCDC58-205ENST00000479899 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
CCDC58-205ENST00000479899 TMEM94Q12767 1356 aa16.86■□□□□ 0.29
CCDC58-205ENST00000479899 KDM5AP29375 1690 aaKnown RBP16.85■□□□□ 0.29
CCDC58-205ENST00000479899 RBM33Q96EV2 1170 aaKnown RBP16.85■□□□□ 0.29
CCDC58-205ENST00000479899 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
CCDC58-205ENST00000479899 ADGRB3O60242 1522 aa16.85■□□□□ 0.29
CCDC58-205ENST00000479899 FBXO3Q9UK99 471 aa16.84■□□□□ 0.29
CCDC58-205ENST00000479899 CHRDL2Q6WN34 429 aa16.83■□□□□ 0.28
CCDC58-205ENST00000479899 LMTK2Q8IWU2 1503 aa16.83■□□□□ 0.28
CCDC58-205ENST00000479899 SLC26A8Q96RN1 970 aa16.83■□□□□ 0.28
CCDC58-205ENST00000479899 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
CCDC58-205ENST00000479899 IDI1Q13907 227 aa16.82■□□□□ 0.28
CCDC58-205ENST00000479899 BCANQ96GW7 911 aa16.82■□□□□ 0.28
CCDC58-205ENST00000479899 RGS17Q9UGC6 210 aaPredicted RBP16.82■□□□□ 0.28
CCDC58-205ENST00000479899 TET3O43151 1660 aa16.81■□□□□ 0.28
CCDC58-205ENST00000479899 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
CCDC58-205ENST00000479899 PROSER2Q86WR7 435 aaPredicted RBP16.8■□□□□ 0.28
CCDC58-205ENST00000479899 MYO5BQ9ULV0 1848 aa16.8■□□□□ 0.28
CCDC58-205ENST00000479899 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
CCDC58-205ENST00000479899 GCC2Q8IWJ2 1684 aa16.79■□□□□ 0.28
CCDC58-205ENST00000479899 KCNA6P17658 529 aa16.78■□□□□ 0.28
CCDC58-205ENST00000479899 PHLPP1O60346 1717 aa16.78■□□□□ 0.28
CCDC58-205ENST00000479899 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
CCDC58-205ENST00000479899 NOS1P29475 1434 aa16.78■□□□□ 0.28
CCDC58-205ENST00000479899 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.28
CCDC58-205ENST00000479899 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
CCDC58-205ENST00000479899 MSH6P52701 1360 aa16.76■□□□□ 0.27
CCDC58-205ENST00000479899 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
CCDC58-205ENST00000479899 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
CCDC58-205ENST00000479899 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
CCDC58-205ENST00000479899 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
CCDC58-205ENST00000479899 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
CCDC58-205ENST00000479899 RIMS2Q9UQ26 1411 aa16.71■□□□□ 0.27
CCDC58-205ENST00000479899 SLC52A1Q9NWF4 448 aa16.71■□□□□ 0.27
CCDC58-205ENST00000479899 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
CCDC58-205ENST00000479899 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
CCDC58-205ENST00000479899 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
CCDC58-205ENST00000479899 CHGAP10645 457 aaKnown RBP16.7■□□□□ 0.26
CCDC58-205ENST00000479899 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
CCDC58-205ENST00000479899 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
CCDC58-205ENST00000479899 COL16A1Q07092 1604 aaPredicted RBP16.69■□□□□ 0.26
CCDC58-205ENST00000479899 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
CCDC58-205ENST00000479899 UNC13BO14795 1591 aa16.68■□□□□ 0.26
CCDC58-205ENST00000479899 NUTM2DQ5VT03 806 aaPredicted RBP16.67■□□□□ 0.26
CCDC58-205ENST00000479899 SLAIN2Q9P270 581 aa16.67■□□□□ 0.26
CCDC58-205ENST00000479899 JCADQ9P266 1359 aa16.66■□□□□ 0.26
CCDC58-205ENST00000479899 E9PCH4 1651 aa16.66■□□□□ 0.26
CCDC58-205ENST00000479899 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC58-205ENST00000479899 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.64■□□□□ 0.25
CCDC58-205ENST00000479899 LRP6O75581 1613 aa16.63■□□□□ 0.25
CCDC58-205ENST00000479899 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
CCDC58-205ENST00000479899 MEX3CQ5U5Q3 659 aaKnown RBP16.62■□□□□ 0.25
CCDC58-205ENST00000479899 DIP2AQ14689 1571 aa16.62■□□□□ 0.25
CCDC58-205ENST00000479899 ADAMTS13Q76LX8 1427 aa16.61■□□□□ 0.25
CCDC58-205ENST00000479899 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
CCDC58-205ENST00000479899 TRPM2O94759 1503 aa16.6■□□□□ 0.25
CCDC58-205ENST00000479899 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
CCDC58-205ENST00000479899 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
CCDC58-205ENST00000479899 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC58-205ENST00000479899 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
CCDC58-205ENST00000479899 ATF3P18847 181 aa16.58■□□□□ 0.24
CCDC58-205ENST00000479899 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
CCDC58-205ENST00000479899 TBX22Q9Y458 520 aa16.58■□□□□ 0.24
CCDC58-205ENST00000479899 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
CCDC58-205ENST00000479899 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
CCDC58-205ENST00000479899 SPATA31A6Q5VVP1 1343 aa16.56■□□□□ 0.24
CCDC58-205ENST00000479899 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
CCDC58-205ENST00000479899 MIER1Q8N108 512 aa16.55■□□□□ 0.24
CCDC58-205ENST00000479899 ITGAEP38570 1179 aa16.54■□□□□ 0.24
CCDC58-205ENST00000479899 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
CCDC58-205ENST00000479899 NUTM2BA6NNL0 878 aaPredicted RBP16.53■□□□□ 0.24
CCDC58-205ENST00000479899 NUTM2EB1AL46 878 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms