RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
RAPGEF3-209ENST00000479866 CABP2Q9NPB3 220 aa15.27■□□□□ 0.04
RAPGEF3-209ENST00000479866 ZFYVE16Q7Z3T8 1539 aa15.27■□□□□ 0.03
RAPGEF3-209ENST00000479866 PDIA4P13667 645 aaKnown RBP15.27■□□□□ 0.03
RAPGEF3-209ENST00000479866 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
RAPGEF3-209ENST00000479866 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
RAPGEF3-209ENST00000479866 ABCA9Q8IUA7 1624 aa15.26■□□□□ 0.03
RAPGEF3-209ENST00000479866 STAC3Q96MF2 364 aa15.25■□□□□ 0.03
RAPGEF3-209ENST00000479866 MORC1Q86VD1 984 aa15.25■□□□□ 0.03
RAPGEF3-209ENST00000479866 TXNDC2Q86VQ3 553 aa15.24■□□□□ 0.03
RAPGEF3-209ENST00000479866 PLA2R1Q13018 1463 aa15.24■□□□□ 0.03
RAPGEF3-209ENST00000479866 PRAM1Q96QH2 718 aa15.24■□□□□ 0.03
RAPGEF3-209ENST00000479866 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
RAPGEF3-209ENST00000479866 CROCC2H7BZ55 1655 aa15.24■□□□□ 0.03
RAPGEF3-209ENST00000479866 SUPT16HQ9Y5B9 1047 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-209ENST00000479866 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
RAPGEF3-209ENST00000479866 MAST1Q9Y2H9 1570 aa15.23■□□□□ 0.03
RAPGEF3-209ENST00000479866 UGGT1Q9NYU2 1555 aa15.23■□□□□ 0.03
RAPGEF3-209ENST00000479866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAPGEF3-209ENST00000479866 ZBTB7CA1YPR0 619 aa15.22■□□□□ 0.03
RAPGEF3-209ENST00000479866 NPATQ14207 1427 aa15.22■□□□□ 0.03
RAPGEF3-209ENST00000479866 RALBP1Q15311 655 aa15.21■□□□□ 0.03
RAPGEF3-209ENST00000479866 MLH3Q9UHC1 1453 aa15.2■□□□□ 0.02
RAPGEF3-209ENST00000479866 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
RAPGEF3-209ENST00000479866 EVC2Q86UK5 1308 aa15.2■□□□□ 0.02
RAPGEF3-209ENST00000479866 ATP10AO60312 1499 aa15.2■□□□□ 0.02
RAPGEF3-209ENST00000479866 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
RAPGEF3-209ENST00000479866 ARAP3Q8WWN8 1544 aa15.19■□□□□ 0.02
RAPGEF3-209ENST00000479866 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
RAPGEF3-209ENST00000479866 NLRP13Q86W25 1043 aa15.19■□□□□ 0.02
RAPGEF3-209ENST00000479866 U2SURPO15042 1029 aaKnown RBP15.18■□□□□ 0.02
RAPGEF3-209ENST00000479866 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
RAPGEF3-209ENST00000479866 RALGAPBQ86X10 1494 aa15.17■□□□□ 0.02
RAPGEF3-209ENST00000479866 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
RAPGEF3-209ENST00000479866 MYBBP1AQ9BQG0 1328 aaKnown RBP15.16■□□□□ 0.02
RAPGEF3-209ENST00000479866 PLXNC1O60486 1568 aa15.16■□□□□ 0.02
RAPGEF3-209ENST00000479866 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF3-209ENST00000479866 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
RAPGEF3-209ENST00000479866 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
RAPGEF3-209ENST00000479866 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
RAPGEF3-209ENST00000479866 NEFMP07197 916 aa15.15■□□□□ 0.02
RAPGEF3-209ENST00000479866 TESK2Q96S53 571 aa15.15■□□□□ 0.02
RAPGEF3-209ENST00000479866 HECW2Q9P2P5 1572 aa15.15■□□□□ 0.02
RAPGEF3-209ENST00000479866 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
RAPGEF3-209ENST00000479866 ERICH6BQ5W0A0 696 aa15.14■□□□□ 0.01
RAPGEF3-209ENST00000479866 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
RAPGEF3-209ENST00000479866 CFAP53Q96M91 514 aa15.13■□□□□ 0.01
RAPGEF3-209ENST00000479866 CFAP74Q9C0B2 1584 aa15.13■□□□□ 0.01
RAPGEF3-209ENST00000479866 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
RAPGEF3-209ENST00000479866 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
RAPGEF3-209ENST00000479866 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF3-209ENST00000479866 PRDM15P57071 1507 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF3-209ENST00000479866 KDM5DQ9BY66 1539 aa15.11■□□□□ 0.01
RAPGEF3-209ENST00000479866 THEMISQ8N1K5 641 aaPredicted RBP15.11■□□□□ 0.01
RAPGEF3-209ENST00000479866 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
RAPGEF3-209ENST00000479866 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
RAPGEF3-209ENST00000479866 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
RAPGEF3-209ENST00000479866 SCAF11Q99590 1463 aaKnown RBP15.1■□□□□ 0.01
RAPGEF3-209ENST00000479866 CABP1Q9NZU7 370 aa15.1■□□□□ 0.01
RAPGEF3-209ENST00000479866 TNRQ92752 1358 aa15.09■□□□□ 0.01
RAPGEF3-209ENST00000479866 SPATA31E1Q6ZUB1 1445 aa15.09■□□□□ 0.01
RAPGEF3-209ENST00000479866 U2AF1L5P0DN76 240 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF3-209ENST00000479866 U2AF1Q01081 240 aaKnown RBP eCLIP15.09■□□□□ 0.01
RAPGEF3-209ENST00000479866 NGDNQ8NEJ9 315 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-209ENST00000479866 CANXP27824 592 aaKnown RBP15.08■□□□□ 0.01
RAPGEF3-209ENST00000479866 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
RAPGEF3-209ENST00000479866 KIDINS220Q9ULH0 1771 aa15.08■□□□□ 0
RAPGEF3-209ENST00000479866 IQGAP3Q86VI3 1631 aa15.08■□□□□ 0
RAPGEF3-209ENST00000479866 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
RAPGEF3-209ENST00000479866 UNC13BO14795 1591 aa15.07■□□□□ 0
RAPGEF3-209ENST00000479866 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
RAPGEF3-209ENST00000479866 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
RAPGEF3-209ENST00000479866 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
RAPGEF3-209ENST00000479866 INO80Q9ULG1 1556 aaPredicted RBP15.05■□□□□ 0
RAPGEF3-209ENST00000479866 IL27Q8NEV9 243 aa15.05■□□□□ 0
RAPGEF3-209ENST00000479866 PTPRTO14522 1441 aa15.05■□□□□ 0
RAPGEF3-209ENST00000479866 PPP2R1AP30153 589 aa15.04■□□□□ -0
RAPGEF3-209ENST00000479866 DIP2BQ9P265 1576 aa15.04■□□□□ -0
RAPGEF3-209ENST00000479866 NUDCQ9Y266 331 aa15.04■□□□□ -0
RAPGEF3-209ENST00000479866 ABCC3O15438 1527 aa15.04■□□□□ -0
RAPGEF3-209ENST00000479866 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
RAPGEF3-209ENST00000479866 ZMYND15Q9H091 742 aa15.03■□□□□ -0
RAPGEF3-209ENST00000479866 ADAMTS8Q9UP79 889 aa15.03■□□□□ -0
RAPGEF3-209ENST00000479866 TRPM2O94759 1503 aa15.03■□□□□ -0
RAPGEF3-209ENST00000479866 RIMS2Q9UQ26 1411 aa15.03■□□□□ -0
RAPGEF3-209ENST00000479866 NUTM2GQ5VZR2 741 aa15.02■□□□□ -0
RAPGEF3-209ENST00000479866 PNISRQ8TF01 805 aaKnown RBP15.02■□□□□ -0
RAPGEF3-209ENST00000479866 RBM19Q9Y4C8 960 aaKnown RBP15.02■□□□□ -0
RAPGEF3-209ENST00000479866 LAS1LQ9Y4W2 734 aaKnown RBP15.02□□□□□ -0.01
RAPGEF3-209ENST00000479866 ABCA6Q8N139 1617 aa15.02□□□□□ -0.01
RAPGEF3-209ENST00000479866 MTHFSP49914 203 aa15.01□□□□□ -0.01
RAPGEF3-209ENST00000479866 E9PCH4 1651 aa15.01□□□□□ -0.01
RAPGEF3-209ENST00000479866 EFCAB6Q5THR3 1501 aa15.01□□□□□ -0.01
RAPGEF3-209ENST00000479866 ANKLE2Q86XL3 938 aa15.01□□□□□ -0.01
RAPGEF3-209ENST00000479866 CLTCL1P53675 1640 aa15□□□□□ -0.01
RAPGEF3-209ENST00000479866 MAPK8IP3Q9UPT6 1336 aa15□□□□□ -0.01
RAPGEF3-209ENST00000479866 DIP2CQ9Y2E4 1556 aa15□□□□□ -0.01
RAPGEF3-209ENST00000479866 AMOTL2Q9Y2J4 779 aa15□□□□□ -0.01
RAPGEF3-209ENST00000479866 TET3O43151 1660 aa15□□□□□ -0.01
RAPGEF3-209ENST00000479866 APAF1O14727 1248 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms