RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
PDZRN3-208ENST00000479530 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
PDZRN3-208ENST00000479530 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
PDZRN3-208ENST00000479530 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-208ENST00000479530 KNSTRNQ9Y448 316 aa17.46■□□□□ 0.39
PDZRN3-208ENST00000479530 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.39
PDZRN3-208ENST00000479530 BLMP54132 1417 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-208ENST00000479530 FANCAO15360 1455 aa17.46■□□□□ 0.38
PDZRN3-208ENST00000479530 PTPRTO14522 1441 aa17.46■□□□□ 0.38
PDZRN3-208ENST00000479530 NFKBIBQ15653 356 aa17.45■□□□□ 0.38
PDZRN3-208ENST00000479530 UGGT1Q9NYU2 1555 aa17.45■□□□□ 0.38
PDZRN3-208ENST00000479530 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
PDZRN3-208ENST00000479530 LAMC1P11047 1609 aa17.44■□□□□ 0.38
PDZRN3-208ENST00000479530 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
PDZRN3-208ENST00000479530 MADDQ8WXG6 1647 aa17.44■□□□□ 0.38
PDZRN3-208ENST00000479530 EIF2AK4Q9P2K8 1649 aaKnown RBP17.44■□□□□ 0.38
PDZRN3-208ENST00000479530 CLTCL1P53675 1640 aa17.43■□□□□ 0.38
PDZRN3-208ENST00000479530 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
PDZRN3-208ENST00000479530 GSE1Q14687 1217 aa17.43■□□□□ 0.38
PDZRN3-208ENST00000479530 TRPM2O94759 1503 aa17.42■□□□□ 0.38
PDZRN3-208ENST00000479530 RNF17Q9BXT8 1623 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-208ENST00000479530 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
PDZRN3-208ENST00000479530 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
PDZRN3-208ENST00000479530 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
PDZRN3-208ENST00000479530 SCAF11Q99590 1463 aaKnown RBP17.4■□□□□ 0.38
PDZRN3-208ENST00000479530 ADGRL1O94910 1474 aa17.4■□□□□ 0.38
PDZRN3-208ENST00000479530 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
PDZRN3-208ENST00000479530 C8orf34Q49A92 452 aa17.39■□□□□ 0.37
PDZRN3-208ENST00000479530 ATP7AQ04656 1500 aa17.39■□□□□ 0.37
PDZRN3-208ENST00000479530 ZMYM4Q5VZL5 1548 aa17.39■□□□□ 0.37
PDZRN3-208ENST00000479530 KANK1Q14678 1352 aa17.38■□□□□ 0.37
PDZRN3-208ENST00000479530 CARD14Q9BXL6 1004 aa17.38■□□□□ 0.37
PDZRN3-208ENST00000479530 ASXL2Q76L83 1435 aa17.38■□□□□ 0.37
PDZRN3-208ENST00000479530 UBE2Q2Q8WVN8 375 aa17.38■□□□□ 0.37
PDZRN3-208ENST00000479530 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
PDZRN3-208ENST00000479530 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDZRN3-208ENST00000479530 CENPQQ7L2Z9 268 aaPredicted RBP17.35■□□□□ 0.37
PDZRN3-208ENST00000479530 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
PDZRN3-208ENST00000479530 RGS3P49796 1198 aa17.35■□□□□ 0.37
PDZRN3-208ENST00000479530 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
PDZRN3-208ENST00000479530 IQGAP1P46940 1657 aa17.35■□□□□ 0.37
PDZRN3-208ENST00000479530 GGT6Q6P531 493 aa17.34■□□□□ 0.37
PDZRN3-208ENST00000479530 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
PDZRN3-208ENST00000479530 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
PDZRN3-208ENST00000479530 ARAP3Q8WWN8 1544 aa17.34■□□□□ 0.37
PDZRN3-208ENST00000479530 FRAT2O75474 233 aaPredicted RBP17.34■□□□□ 0.37
PDZRN3-208ENST00000479530 DEPDC5O75140 1603 aa17.33■□□□□ 0.37
PDZRN3-208ENST00000479530 INSRP06213 1382 aa17.33■□□□□ 0.37
PDZRN3-208ENST00000479530 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
PDZRN3-208ENST00000479530 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.36
PDZRN3-208ENST00000479530 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.36
PDZRN3-208ENST00000479530 VWDEQ8N2E2 1590 aa17.33■□□□□ 0.36
PDZRN3-208ENST00000479530 INO80Q9ULG1 1556 aaPredicted RBP17.33■□□□□ 0.36
PDZRN3-208ENST00000479530 ABCA9Q8IUA7 1624 aa17.33■□□□□ 0.36
PDZRN3-208ENST00000479530 MROH1Q8NDA8 1641 aa17.32■□□□□ 0.36
PDZRN3-208ENST00000479530 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
PDZRN3-208ENST00000479530 TRAK1Q9UPV9 953 aa17.32■□□□□ 0.36
PDZRN3-208ENST00000479530 TET3O43151 1660 aa17.32■□□□□ 0.36
PDZRN3-208ENST00000479530 CEP152O94986 1710 aa17.31■□□□□ 0.36
PDZRN3-208ENST00000479530 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
PDZRN3-208ENST00000479530 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
PDZRN3-208ENST00000479530 APAF1O14727 1248 aa17.3■□□□□ 0.36
PDZRN3-208ENST00000479530 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
PDZRN3-208ENST00000479530 ASXL1Q8IXJ9 1541 aa17.29■□□□□ 0.36
PDZRN3-208ENST00000479530 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
PDZRN3-208ENST00000479530 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
PDZRN3-208ENST00000479530 NOS1P29475 1434 aa17.28■□□□□ 0.36
PDZRN3-208ENST00000479530 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
PDZRN3-208ENST00000479530 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
PDZRN3-208ENST00000479530 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
PDZRN3-208ENST00000479530 RAPGEF3O95398 923 aa17.27■□□□□ 0.35
PDZRN3-208ENST00000479530 SYNMO15061 1565 aa17.26■□□□□ 0.35
PDZRN3-208ENST00000479530 MYOM1P52179 1685 aa17.26■□□□□ 0.35
PDZRN3-208ENST00000479530 BCAR3O75815 825 aa17.25■□□□□ 0.35
PDZRN3-208ENST00000479530 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
PDZRN3-208ENST00000479530 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
PDZRN3-208ENST00000479530 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
PDZRN3-208ENST00000479530 CFAP65Q6ZU64 1925 aaKnown RBP17.24■□□□□ 0.35
PDZRN3-208ENST00000479530 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDZRN3-208ENST00000479530 PPRC1Q5VV67 1664 aaKnown RBP17.24■□□□□ 0.35
PDZRN3-208ENST00000479530 MAP3K4Q9Y6R4 1608 aa17.23■□□□□ 0.35
PDZRN3-208ENST00000479530 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
PDZRN3-208ENST00000479530 NPATQ14207 1427 aa17.23■□□□□ 0.35
PDZRN3-208ENST00000479530 EFCAB6Q5THR3 1501 aa17.23■□□□□ 0.35
PDZRN3-208ENST00000479530 IGHDP01880 384 aa17.23■□□□□ 0.35
PDZRN3-208ENST00000479530 CENPJQ9HC77 1338 aaPredicted RBP17.22■□□□□ 0.35
PDZRN3-208ENST00000479530 MROH2AA6NES4 1674 aa17.22■□□□□ 0.35
PDZRN3-208ENST00000479530 CD109Q6YHK3 1445 aa17.22■□□□□ 0.35
PDZRN3-208ENST00000479530 USP19O94966 1318 aa17.22■□□□□ 0.35
PDZRN3-208ENST00000479530 SEC24BO95487 1268 aa17.21■□□□□ 0.35
PDZRN3-208ENST00000479530 MYOM2P54296 1465 aa17.21■□□□□ 0.35
PDZRN3-208ENST00000479530 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.35
PDZRN3-208ENST00000479530 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
PDZRN3-208ENST00000479530 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-208ENST00000479530 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-208ENST00000479530 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
PDZRN3-208ENST00000479530 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
PDZRN3-208ENST00000479530 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
PDZRN3-208ENST00000479530 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-208ENST00000479530 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms