RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
SSR1-207ENST00000479485 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
SSR1-207ENST00000479485 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
SSR1-207ENST00000479485 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
SSR1-207ENST00000479485 ZMYND10O75800 440 aa10.01□□□□□ -0.81
SSR1-207ENST00000479485 AAASQ9NRG9 546 aa10.01□□□□□ -0.81
SSR1-207ENST00000479485 FAM187AA6NFU0 413 aa10□□□□□ -0.81
SSR1-207ENST00000479485 WIPF1O43516 503 aa10□□□□□ -0.81
SSR1-207ENST00000479485 TSKSQ9UJT2 592 aa10□□□□□ -0.81
SSR1-207ENST00000479485 FCHSD2O94868 740 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 GGCXP38435 758 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 SLC19A1P41440 591 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 PRR20EP86478 221 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 PRR20CP86479 221 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 PRR20DP86480 221 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 PRR20BP86481 221 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 PRR20AP86496 221 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 NFX1Q12986 1120 aaKnown RBP9.99□□□□□ -0.81
SSR1-207ENST00000479485 PTGDRQ13258 359 aa9.99□□□□□ -0.81
SSR1-207ENST00000479485 APLP1P51693 650 aa9.98□□□□□ -0.81
SSR1-207ENST00000479485 INSM1Q01101 510 aaPredicted RBP9.98□□□□□ -0.81
SSR1-207ENST00000479485 SMAPO00193 183 aa9.97□□□□□ -0.81
SSR1-207ENST00000479485 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
SSR1-207ENST00000479485 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
SSR1-207ENST00000479485 HIC1Q14526 733 aa9.96□□□□□ -0.82
SSR1-207ENST00000479485 SPRYD7Q5W111 196 aa9.96□□□□□ -0.82
SSR1-207ENST00000479485 SLC24A3Q9HC58 644 aa9.96□□□□□ -0.82
SSR1-207ENST00000479485 GNPATO15228 680 aa9.95□□□□□ -0.82
SSR1-207ENST00000479485 LCE2CQ5TA81 110 aa9.95□□□□□ -0.82
SSR1-207ENST00000479485 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
SSR1-207ENST00000479485 DACH1Q9UI36 760 aa9.95□□□□□ -0.82
SSR1-207ENST00000479485 ZNF598Q86UK7 904 aaKnown RBP9.94□□□□□ -0.82
SSR1-207ENST00000479485 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
SSR1-207ENST00000479485 FECHP22830 423 aa9.93□□□□□ -0.82
SSR1-207ENST00000479485 COPS2P61201 443 aa9.93□□□□□ -0.82
SSR1-207ENST00000479485 PACS2Q86VP3 889 aa9.93□□□□□ -0.82
SSR1-207ENST00000479485 GDF9O60383 454 aa9.92□□□□□ -0.82
SSR1-207ENST00000479485 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
SSR1-207ENST00000479485 RNF223E7ERA6 249 aa9.91□□□□□ -0.82
SSR1-207ENST00000479485 C3orf80F5H4A9 247 aa9.91□□□□□ -0.82
SSR1-207ENST00000479485 CERKQ8TCT0 537 aa9.91□□□□□ -0.82
SSR1-207ENST00000479485 MAP2K5Q13163 448 aa9.9□□□□□ -0.82
SSR1-207ENST00000479485 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
SSR1-207ENST00000479485 PADI6Q6TGC4 694 aa9.89□□□□□ -0.83
SSR1-207ENST00000479485 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
SSR1-207ENST00000479485 CCDC102AQ96A19 550 aa9.88□□□□□ -0.83
SSR1-207ENST00000479485 GMPR2Q9P2T1 348 aaKnown RBP9.88□□□□□ -0.83
SSR1-207ENST00000479485 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
SSR1-207ENST00000479485 LIAT1Q6ZQX7 453 aa9.87□□□□□ -0.83
SSR1-207ENST00000479485 RNF40O75150 1001 aa9.86□□□□□ -0.83
SSR1-207ENST00000479485 CDCA7LQ96GN5 454 aa9.86□□□□□ -0.83
SSR1-207ENST00000479485 AK7Q96M32 723 aa9.86□□□□□ -0.83
SSR1-207ENST00000479485 RBM27Q9P2N5 1060 aaKnown RBP9.86□□□□□ -0.83
SSR1-207ENST00000479485 MINK1Q8N4C8 1332 aaPredicted RBP9.85□□□□□ -0.83
SSR1-207ENST00000479485 IRF6O14896 467 aa9.85□□□□□ -0.83
SSR1-207ENST00000479485 ZPR1O75312 459 aa9.85□□□□□ -0.83
SSR1-207ENST00000479485 PRSS12P56730 875 aa9.85□□□□□ -0.83
SSR1-207ENST00000479485 C11orf95C9JLR9 678 aaPredicted RBP9.84□□□□□ -0.83
SSR1-207ENST00000479485 PPEF1O14829 653 aaPredicted RBP9.83□□□□□ -0.84
SSR1-207ENST00000479485 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
SSR1-207ENST00000479485 TTC13Q8NBP0 860 aa9.82□□□□□ -0.84
SSR1-207ENST00000479485 TRIM66O15016 1216 aa9.8□□□□□ -0.84
SSR1-207ENST00000479485 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
SSR1-207ENST00000479485 TATDN2Q93075 761 aa9.79□□□□□ -0.84
SSR1-207ENST00000479485 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
SSR1-207ENST00000479485 ADGRG1Q9Y653 693 aa9.79□□□□□ -0.84
SSR1-207ENST00000479485 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
SSR1-207ENST00000479485 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
SSR1-207ENST00000479485 NBPF26B4DH59 902 aa9.77□□□□□ -0.85
SSR1-207ENST00000479485 PDE4DQ08499 809 aa9.77□□□□□ -0.85
SSR1-207ENST00000479485 NEUROD2Q15784 382 aa9.77□□□□□ -0.85
SSR1-207ENST00000479485 METTL3Q86U44 580 aaKnown RBP9.77□□□□□ -0.85
SSR1-207ENST00000479485 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
SSR1-207ENST00000479485 AMHR2Q16671 573 aa9.75□□□□□ -0.85
SSR1-207ENST00000479485 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
SSR1-207ENST00000479485 TERTO14746 1132 aaKnown RBP9.74□□□□□ -0.85
SSR1-207ENST00000479485 TLL1O43897 1013 aa9.74□□□□□ -0.85
SSR1-207ENST00000479485 OATP04181 439 aa9.74□□□□□ -0.85
SSR1-207ENST00000479485 NUDT18Q6ZVK8 323 aa9.74□□□□□ -0.85
SSR1-207ENST00000479485 RBM46Q8TBY0 533 aaKnown RBP9.74□□□□□ -0.85
SSR1-207ENST00000479485 GPBP1L1Q9HC44 474 aaPredicted RBP9.74□□□□□ -0.85
SSR1-207ENST00000479485 PKD2L1Q9P0L9 805 aa9.74□□□□□ -0.85
SSR1-207ENST00000479485 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
SSR1-207ENST00000479485 S1PR4O95977 384 aa9.72□□□□□ -0.85
SSR1-207ENST00000479485 AVPP01185 164 aa9.72□□□□□ -0.85
SSR1-207ENST00000479485 LORP23490 312 aaPredicted RBP9.72□□□□□ -0.85
SSR1-207ENST00000479485 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
SSR1-207ENST00000479485 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
SSR1-207ENST00000479485 AXIN1O15169 862 aa9.71□□□□□ -0.86
SSR1-207ENST00000479485 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.86
SSR1-207ENST00000479485 PLA2G2CQ5R387 149 aa9.71□□□□□ -0.86
SSR1-207ENST00000479485 BLOC1S3Q6QNY0 202 aa9.71□□□□□ -0.86
SSR1-207ENST00000479485 EYA1Q99502 592 aa9.71□□□□□ -0.86
SSR1-207ENST00000479485 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
SSR1-207ENST00000479485 FOXC1Q12948 553 aa9.7□□□□□ -0.86
SSR1-207ENST00000479485 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
SSR1-207ENST00000479485 SWT1Q5T5J6 900 aaKnown RBP9.69□□□□□ -0.86
SSR1-207ENST00000479485 RCCD1A6NED2 376 aa9.68□□□□□ -0.86
SSR1-207ENST00000479485 FAM181BA6NEQ2 426 aa9.68□□□□□ -0.86
SSR1-207ENST00000479485 GIGYF2Q6Y7W6 1299 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms