RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 POLR1AO95602 1720 aaPredicted RBP17.92■□□□□ 0.46
CNKSR3-204ENST00000479339 IQSEC2Q5JU85 1478 aa17.92■□□□□ 0.46
CNKSR3-204ENST00000479339 CCDC136Q96JN2 1154 aa17.91■□□□□ 0.46
CNKSR3-204ENST00000479339 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
CNKSR3-204ENST00000479339 MED14O60244 1454 aa17.9■□□□□ 0.46
CNKSR3-204ENST00000479339 EFCAB6Q5THR3 1501 aa17.9■□□□□ 0.46
CNKSR3-204ENST00000479339 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
CNKSR3-204ENST00000479339 IL27Q8NEV9 243 aa17.88■□□□□ 0.45
CNKSR3-204ENST00000479339 NPHP4O75161 1426 aaPredicted RBP17.88■□□□□ 0.45
CNKSR3-204ENST00000479339 UBR1Q8IWV7 1749 aa17.88■□□□□ 0.45
CNKSR3-204ENST00000479339 CFAP65Q6ZU64 1925 aaKnown RBP17.87■□□□□ 0.45
CNKSR3-204ENST00000479339 NOS1P29475 1434 aa17.87■□□□□ 0.45
CNKSR3-204ENST00000479339 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
CNKSR3-204ENST00000479339 UNC13BO14795 1591 aa17.87■□□□□ 0.45
CNKSR3-204ENST00000479339 PAK3O75914 559 aaPredicted RBP17.86■□□□□ 0.45
CNKSR3-204ENST00000479339 IPO9Q96P70 1041 aaKnown RBP17.86■□□□□ 0.45
CNKSR3-204ENST00000479339 WASHC2AQ641Q2 1341 aa17.86■□□□□ 0.45
CNKSR3-204ENST00000479339 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
CNKSR3-204ENST00000479339 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
CNKSR3-204ENST00000479339 SLIT1O75093 1534 aa17.85■□□□□ 0.45
CNKSR3-204ENST00000479339 USP35Q9P2H5 1018 aa17.84■□□□□ 0.45
CNKSR3-204ENST00000479339 SYNMO15061 1565 aa17.83■□□□□ 0.45
CNKSR3-204ENST00000479339 TET3O43151 1660 aa17.83■□□□□ 0.44
CNKSR3-204ENST00000479339 IDI1Q13907 227 aa17.82■□□□□ 0.44
CNKSR3-204ENST00000479339 PIK3C2BO00750 1634 aa17.82■□□□□ 0.44
CNKSR3-204ENST00000479339 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
CNKSR3-204ENST00000479339 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
CNKSR3-204ENST00000479339 IQGAP1P46940 1657 aa17.81■□□□□ 0.44
CNKSR3-204ENST00000479339 SLC52A1Q9NWF4 448 aa17.81■□□□□ 0.44
CNKSR3-204ENST00000479339 CPS1P31327 1500 aa17.81■□□□□ 0.44
CNKSR3-204ENST00000479339 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
CNKSR3-204ENST00000479339 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
CNKSR3-204ENST00000479339 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
CNKSR3-204ENST00000479339 TMEM2Q9UHN6 1383 aa17.8■□□□□ 0.44
CNKSR3-204ENST00000479339 LTKP29376 864 aa17.79■□□□□ 0.44
CNKSR3-204ENST00000479339 GCC2Q8IWJ2 1684 aa17.79■□□□□ 0.44
CNKSR3-204ENST00000479339 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
CNKSR3-204ENST00000479339 TXNDC2Q86VQ3 553 aa17.79■□□□□ 0.44
CNKSR3-204ENST00000479339 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
CNKSR3-204ENST00000479339 IQGAP3Q86VI3 1631 aa17.78■□□□□ 0.44
CNKSR3-204ENST00000479339 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
CNKSR3-204ENST00000479339 EID1Q9Y6B2 187 aa17.78■□□□□ 0.44
CNKSR3-204ENST00000479339 ADGRB3O60242 1522 aa17.77■□□□□ 0.44
CNKSR3-204ENST00000479339 NUP155O75694 1391 aa17.76■□□□□ 0.43
CNKSR3-204ENST00000479339 RTN4Q9NQC3 1192 aaKnown RBP17.74■□□□□ 0.43
CNKSR3-204ENST00000479339 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
CNKSR3-204ENST00000479339 E9PCH4 1651 aa17.73■□□□□ 0.43
CNKSR3-204ENST00000479339 NAIPQ13075 1403 aa17.72■□□□□ 0.43
CNKSR3-204ENST00000479339 UBAP1LF5GYI3 381 aa17.72■□□□□ 0.43
CNKSR3-204ENST00000479339 B4GALNT3Q6L9W6 998 aa17.7■□□□□ 0.42
CNKSR3-204ENST00000479339 PKNOX2Q96KN3 472 aa17.69■□□□□ 0.42
CNKSR3-204ENST00000479339 STRCP1A6NGW2 1772 aa17.68■□□□□ 0.42
CNKSR3-204ENST00000479339 TMEM131LA2VDJ0 1609 aa17.68■□□□□ 0.42
CNKSR3-204ENST00000479339 HFM1A2PYH4 1435 aa17.68■□□□□ 0.42
CNKSR3-204ENST00000479339 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
CNKSR3-204ENST00000479339 LRRC7Q96NW7 1537 aa17.68■□□□□ 0.42
CNKSR3-204ENST00000479339 RIMS2Q9UQ26 1411 aa17.66■□□□□ 0.42
CNKSR3-204ENST00000479339 HDGFP51858 240 aaKnown RBP17.65■□□□□ 0.42
CNKSR3-204ENST00000479339 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
CNKSR3-204ENST00000479339 TOM1O60784 492 aa17.65■□□□□ 0.42
CNKSR3-204ENST00000479339 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
CNKSR3-204ENST00000479339 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
CNKSR3-204ENST00000479339 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
CNKSR3-204ENST00000479339 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
CNKSR3-204ENST00000479339 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.63■□□□□ 0.41
CNKSR3-204ENST00000479339 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
CNKSR3-204ENST00000479339 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
CNKSR3-204ENST00000479339 KCNA6P17658 529 aa17.62■□□□□ 0.41
CNKSR3-204ENST00000479339 SLC26A8Q96RN1 970 aa17.62■□□□□ 0.41
CNKSR3-204ENST00000479339 SPHKAPQ2M3C7 1700 aa17.6■□□□□ 0.41
CNKSR3-204ENST00000479339 NEFMP07197 916 aa17.6■□□□□ 0.41
CNKSR3-204ENST00000479339 ALKQ9UM73 1620 aa17.6■□□□□ 0.41
CNKSR3-204ENST00000479339 GLIPR1L2Q4G1C9 344 aa17.59■□□□□ 0.41
CNKSR3-204ENST00000479339 NWD1Q149M9 1564 aa17.58■□□□□ 0.4
CNKSR3-204ENST00000479339 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
CNKSR3-204ENST00000479339 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
CNKSR3-204ENST00000479339 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
CNKSR3-204ENST00000479339 TRPM2O94759 1503 aa17.57■□□□□ 0.4
CNKSR3-204ENST00000479339 NKTRP30414 1462 aaKnown RBP17.56■□□□□ 0.4
CNKSR3-204ENST00000479339 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
CNKSR3-204ENST00000479339 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
CNKSR3-204ENST00000479339 XIRP1Q702N8 1843 aaKnown RBP17.54■□□□□ 0.4
CNKSR3-204ENST00000479339 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
CNKSR3-204ENST00000479339 CLTCL1P53675 1640 aa17.53■□□□□ 0.4
CNKSR3-204ENST00000479339 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
CNKSR3-204ENST00000479339 HSPA1LP34931 641 aa17.52■□□□□ 0.4
CNKSR3-204ENST00000479339 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
CNKSR3-204ENST00000479339 PROSER2Q86WR7 435 aaPredicted RBP17.52■□□□□ 0.4
CNKSR3-204ENST00000479339 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
CNKSR3-204ENST00000479339 TONSLQ96HA7 1378 aa17.52■□□□□ 0.4
CNKSR3-204ENST00000479339 GSE1Q14687 1217 aa17.52■□□□□ 0.39
CNKSR3-204ENST00000479339 HIRIP3Q9BW71 556 aaPredicted RBP17.52■□□□□ 0.39
CNKSR3-204ENST00000479339 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.39
CNKSR3-204ENST00000479339 PIK3R4Q99570 1358 aa17.51■□□□□ 0.39
CNKSR3-204ENST00000479339 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
CNKSR3-204ENST00000479339 CHD2O14647 1828 aaKnown RBP17.5■□□□□ 0.39
CNKSR3-204ENST00000479339 FAM43AQ8N2R8 423 aa17.5■□□□□ 0.39
CNKSR3-204ENST00000479339 ZNF326Q5BKZ1 582 aaKnown RBP17.49■□□□□ 0.39
CNKSR3-204ENST00000479339 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
CNKSR3-204ENST00000479339 SETBP1Q9Y6X0 1596 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms