RNA–Protein interactions for RNA: ENST00000479107.1

HLA-DPA1-247, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 5,025 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-247ENST00000479107 C8orf37Q96NL8 207 aa10.91□□□□□ -0.66
HLA-DPA1-247ENST00000479107 RUSC2Q8N2Y8 1516 aa10.91□□□□□ -0.66
HLA-DPA1-247ENST00000479107 ANO8Q9HCE9 1232 aaPredicted RBP10.91□□□□□ -0.66
HLA-DPA1-247ENST00000479107 MAGI2Q86UL8 1455 aa10.9□□□□□ -0.66
HLA-DPA1-247ENST00000479107 NUTM2FA1L443 756 aa10.9□□□□□ -0.66
HLA-DPA1-247ENST00000479107 PLCB2Q00722 1185 aa10.9□□□□□ -0.66
HLA-DPA1-247ENST00000479107 PTPRKQ15262 1439 aa10.9□□□□□ -0.66
HLA-DPA1-247ENST00000479107 TMF1P82094 1093 aa10.9□□□□□ -0.67
HLA-DPA1-247ENST00000479107 FBXO31Q5XUX0 539 aaPredicted RBP10.9□□□□□ -0.67
HLA-DPA1-247ENST00000479107 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
HLA-DPA1-247ENST00000479107 PRKRIP1Q9H875 184 aaPredicted RBP10.89□□□□□ -0.67
HLA-DPA1-247ENST00000479107 ZNF335Q9H4Z2 1342 aaPredicted RBP10.89□□□□□ -0.67
HLA-DPA1-247ENST00000479107 FAM161AQ3B820 660 aa10.89□□□□□ -0.67
HLA-DPA1-247ENST00000479107 MSH5O43196 834 aa10.89□□□□□ -0.67
HLA-DPA1-247ENST00000479107 ESCO1Q5FWF5 840 aa10.88□□□□□ -0.67
HLA-DPA1-247ENST00000479107 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 HSPA1LP34931 641 aa10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 KIAA2012Q0VF49 1180 aa10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 CENPQQ7L2Z9 268 aaPredicted RBP10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 RWDD1Q9H446 243 aaPredicted RBP10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 ROCK2O75116 1388 aaKnown RBP10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 RRP1P56182 461 aaKnown RBP10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 LRRC59Q96AG4 307 aaKnown RBP10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 NUP155O75694 1391 aa10.87□□□□□ -0.67
HLA-DPA1-247ENST00000479107 ZRSR1Q15695 479 aaKnown RBP10.86□□□□□ -0.67
HLA-DPA1-247ENST00000479107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.86□□□□□ -0.67
HLA-DPA1-247ENST00000479107 MAPK8IP3Q9UPT6 1336 aa10.86□□□□□ -0.67
HLA-DPA1-247ENST00000479107 NLRP13Q86W25 1043 aa10.86□□□□□ -0.67
HLA-DPA1-247ENST00000479107 PMFBP1Q8TBY8 1022 aa10.86□□□□□ -0.67
HLA-DPA1-247ENST00000479107 DDX11L8A8MPP1 907 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 KIF14Q15058 1648 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 NBPF8Q3BBV2 869 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 NBPF14Q5TI25 921 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 DCAF11Q8TEB1 546 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 EXOC6Q8TAG9 804 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 GOLGA6L6A8MZA4 724 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 NPHP1O15259 732 aa10.85□□□□□ -0.67
HLA-DPA1-247ENST00000479107 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
HLA-DPA1-247ENST00000479107 DIP2BQ9P265 1576 aa10.84□□□□□ -0.67
HLA-DPA1-247ENST00000479107 NRDCO43847 1150 aa10.84□□□□□ -0.67
HLA-DPA1-247ENST00000479107 CFAP74Q9C0B2 1584 aa10.83□□□□□ -0.68
HLA-DPA1-247ENST00000479107 HMGB2P26583 209 aaKnown RBP10.83□□□□□ -0.68
HLA-DPA1-247ENST00000479107 NFKBIBQ15653 356 aa10.83□□□□□ -0.68
HLA-DPA1-247ENST00000479107 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
HLA-DPA1-247ENST00000479107 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
HLA-DPA1-247ENST00000479107 PRXQ9BXM0 1461 aa10.83□□□□□ -0.68
HLA-DPA1-247ENST00000479107 KIF15Q9NS87 1388 aa10.83□□□□□ -0.68
HLA-DPA1-247ENST00000479107 GOLGA2Q08379 1002 aa10.82□□□□□ -0.68
HLA-DPA1-247ENST00000479107 ARID3AQ99856 593 aa10.82□□□□□ -0.68
HLA-DPA1-247ENST00000479107 ZNF644Q9H582 1327 aaPredicted RBP10.82□□□□□ -0.68
HLA-DPA1-247ENST00000479107 BAG6P46379 1132 aa10.82□□□□□ -0.68
HLA-DPA1-247ENST00000479107 DISP1Q96F81 1524 aa10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 CASKIN1Q8WXD9 1431 aa10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 CALD1Q05682 793 aaKnown RBP10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 SYAP1Q96A49 352 aaPredicted RBP10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 LRPPRCP42704 1394 aaKnown RBP10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 SRPK2P78362 688 aaKnown RBP10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 MYBBP1AQ9BQG0 1328 aaKnown RBP10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 GPRASP1Q5JY77 1395 aa10.81□□□□□ -0.68
HLA-DPA1-247ENST00000479107 A2MP01023 1474 aa10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 C19orf44Q9H6X5 657 aa10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 MFAP1P55081 439 aaKnown RBP10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 SKOR2Q2VWA4 1001 aaPredicted RBP10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 DHX29Q7Z478 1369 aaKnown RBP10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 PKNOX2Q96KN3 472 aa10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 CDK13Q14004 1512 aaKnown RBP10.8□□□□□ -0.68
HLA-DPA1-247ENST00000479107 KCNA6P17658 529 aa10.79□□□□□ -0.68
HLA-DPA1-247ENST00000479107 MCCP23508 829 aa10.79□□□□□ -0.68
HLA-DPA1-247ENST00000479107 RAPGEF6Q8TEU7 1601 aa10.79□□□□□ -0.68
HLA-DPA1-247ENST00000479107 FAM43AQ8N2R8 423 aa10.79□□□□□ -0.68
HLA-DPA1-247ENST00000479107 SLAIN2Q9P270 581 aa10.79□□□□□ -0.68
HLA-DPA1-247ENST00000479107 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
HLA-DPA1-247ENST00000479107 SOX12O15370 315 aa10.78□□□□□ -0.68
HLA-DPA1-247ENST00000479107 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
HLA-DPA1-247ENST00000479107 GOLGA6L4A6NEF3 574 aa10.78□□□□□ -0.68
HLA-DPA1-247ENST00000479107 CRBNQ96SW2 442 aa10.78□□□□□ -0.68
HLA-DPA1-247ENST00000479107 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.68
HLA-DPA1-247ENST00000479107 GLI2P10070 1586 aa10.77□□□□□ -0.69
HLA-DPA1-247ENST00000479107 DRC7Q8IY82 874 aa10.77□□□□□ -0.69
HLA-DPA1-247ENST00000479107 QTRT2Q9H974 415 aaKnown RBP10.77□□□□□ -0.69
HLA-DPA1-247ENST00000479107 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
HLA-DPA1-247ENST00000479107 AMOTL2Q9Y2J4 779 aa10.76□□□□□ -0.69
HLA-DPA1-247ENST00000479107 ARAP3Q8WWN8 1544 aa10.76□□□□□ -0.69
HLA-DPA1-247ENST00000479107 PRDM11Q9NQV5 511 aa10.76□□□□□ -0.69
HLA-DPA1-247ENST00000479107 STRN4Q9NRL3 753 aa10.75□□□□□ -0.69
HLA-DPA1-247ENST00000479107 TRPC5Q9UL62 973 aaPredicted RBP10.75□□□□□ -0.69
HLA-DPA1-247ENST00000479107 CENPJQ9HC77 1338 aaPredicted RBP10.75□□□□□ -0.69
HLA-DPA1-247ENST00000479107 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
HLA-DPA1-247ENST00000479107 PLIN1O60240 522 aa10.75□□□□□ -0.69
HLA-DPA1-247ENST00000479107 USP21Q9UK80 565 aa10.75□□□□□ -0.69
HLA-DPA1-247ENST00000479107 U2SURPO15042 1029 aaKnown RBP10.74□□□□□ -0.69
HLA-DPA1-247ENST00000479107 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
HLA-DPA1-247ENST00000479107 HECW2Q9P2P5 1572 aa10.74□□□□□ -0.69
HLA-DPA1-247ENST00000479107 ZCCHC11Q5TAX3 1644 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms