RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 ADGRB3O60242 1522 aa37.71■■■■□ 3.63
CHKB-208ENST00000479003 MRS2Q9HD23 443 aa37.7■■■■□ 3.63
CHKB-208ENST00000479003 MADDQ8WXG6 1647 aa37.66■■■■□ 3.62
CHKB-208ENST00000479003 ROCK2O75116 1388 aaKnown RBP37.65■■■■□ 3.62
CHKB-208ENST00000479003 FBXO31Q5XUX0 539 aaPredicted RBP37.65■■■■□ 3.62
CHKB-208ENST00000479003 CARD11Q9BXL7 1154 aa37.64■■■■□ 3.62
CHKB-208ENST00000479003 CHGAP10645 457 aaKnown RBP37.63■■■■□ 3.61
CHKB-208ENST00000479003 ERVK-7P63135 1459 aa37.62■■■■□ 3.61
CHKB-208ENST00000479003 IFT172Q9UG01 1749 aa37.61■■■■□ 3.61
CHKB-208ENST00000479003 NBPF1Q3BBV0 1214 aa37.6■■■■□ 3.61
CHKB-208ENST00000479003 FAM9BQ8IZU0 186 aa37.6■■■■□ 3.61
CHKB-208ENST00000479003 IDI1Q13907 227 aa37.57■■■■□ 3.61
CHKB-208ENST00000479003 STAC3Q96MF2 364 aa37.57■■■■□ 3.6
CHKB-208ENST00000479003 ZBED9Q6R2W3 1325 aa37.56■■■■□ 3.6
CHKB-208ENST00000479003 MYOM2P54296 1465 aa37.55■■■■□ 3.6
CHKB-208ENST00000479003 GPRASP1Q5JY77 1395 aa37.55■■■■□ 3.6
CHKB-208ENST00000479003 ESF1Q9H501 851 aaKnown RBP37.54■■■■□ 3.6
CHKB-208ENST00000479003 SLC52A1Q9NWF4 448 aa37.54■■■■□ 3.6
CHKB-208ENST00000479003 SPATA31D1Q6ZQQ2 1576 aa37.52■■■■□ 3.6
CHKB-208ENST00000479003 ZMYM3Q14202 1370 aa37.52■■■■□ 3.6
CHKB-208ENST00000479003 PPLO60437 1756 aa37.5■■■■□ 3.59
CHKB-208ENST00000479003 ADGRF5Q8IZF2 1346 aa37.5■■■■□ 3.59
CHKB-208ENST00000479003 LAMC1P11047 1609 aa37.49■■■■□ 3.59
CHKB-208ENST00000479003 POLR3GLQ9BT43 218 aa37.48■■■■□ 3.59
CHKB-208ENST00000479003 MYO5BQ9ULV0 1848 aa37.45■■■■□ 3.59
CHKB-208ENST00000479003 NRXN1Q9ULB1 1477 aa37.45■■■■□ 3.59
CHKB-208ENST00000479003 TMEM131LA2VDJ0 1609 aa37.45■■■■□ 3.59
CHKB-208ENST00000479003 ST20-MTHFSA0A0A6YYL1 179 aa37.43■■■■□ 3.58
CHKB-208ENST00000479003 ERICH6BQ5W0A0 696 aa37.43■■■■□ 3.58
CHKB-208ENST00000479003 NEXMIFQ5QGS0 1516 aa37.41■■■■□ 3.58
CHKB-208ENST00000479003 RPGRIP1LQ68CZ1 1315 aa37.41■■■■□ 3.58
CHKB-208ENST00000479003 KIAA1210Q9ULL0 1709 aa37.39■■■■□ 3.58
CHKB-208ENST00000479003 CFAP70Q5T0N1 1121 aa37.35■■■■□ 3.57
CHKB-208ENST00000479003 PIK3C2GO75747 1445 aa37.35■■■■□ 3.57
CHKB-208ENST00000479003 NUTM2DQ5VT03 806 aaPredicted RBP37.34■■■■□ 3.57
CHKB-208ENST00000479003 FER1L4A9Z1Z3 1794 aa37.33■■■■□ 3.57
CHKB-208ENST00000479003 IRX6P78412 446 aaPredicted RBP37.32■■■■□ 3.56
CHKB-208ENST00000479003 IQGAP1P46940 1657 aa37.31■■■■□ 3.56
CHKB-208ENST00000479003 KTN1Q86UP2 1357 aaKnown RBP37.29■■■■□ 3.56
CHKB-208ENST00000479003 STAG3Q9UJ98 1225 aa37.27■■■■□ 3.56
CHKB-208ENST00000479003 TNRQ92752 1358 aa37.26■■■■□ 3.56
CHKB-208ENST00000479003 A2ML1A8K2U0 1454 aa37.26■■■■□ 3.56
CHKB-208ENST00000479003 VGFO15240 615 aaPredicted RBP37.25■■■■□ 3.55
CHKB-208ENST00000479003 CEBPAP49715 358 aaPredicted RBP37.25■■■■□ 3.55
CHKB-208ENST00000479003 SCAF11Q99590 1463 aaKnown RBP37.25■■■■□ 3.55
CHKB-208ENST00000479003 C3P01024 1663 aa37.25■■■■□ 3.55
CHKB-208ENST00000479003 CNGB1Q14028 1251 aaPredicted RBP37.23■■■■□ 3.55
CHKB-208ENST00000479003 SMG6Q86US8 1419 aaKnown RBP37.22■■■■□ 3.55
CHKB-208ENST00000479003 PNISRQ8TF01 805 aaKnown RBP37.22■■■■□ 3.55
CHKB-208ENST00000479003 ZFYVE9O95405 1425 aa37.21■■■■□ 3.55
CHKB-208ENST00000479003 C14orf93Q9H972 538 aaKnown RBP37.2■■■■□ 3.55
CHKB-208ENST00000479003 PPP4R2Q9NY27 417 aa37.2■■■■□ 3.55
CHKB-208ENST00000479003 RALBP1Q15311 655 aa37.19■■■■□ 3.54
CHKB-208ENST00000479003 TESK2Q96S53 571 aa37.19■■■■□ 3.54
CHKB-208ENST00000479003 SETBP1Q9Y6X0 1596 aa37.19■■■■□ 3.54
CHKB-208ENST00000479003 BRD4O60885 1362 aaPredicted RBP37.17■■■■□ 3.54
CHKB-208ENST00000479003 TMC1Q8TDI8 760 aa37.16■■■■□ 3.54
CHKB-208ENST00000479003 MYBBP1AQ9BQG0 1328 aaKnown RBP37.16■■■■□ 3.54
CHKB-208ENST00000479003 ADGRB1O14514 1584 aa37.16■■■■□ 3.54
CHKB-208ENST00000479003 RBM19Q9Y4C8 960 aaKnown RBP37.15■■■■□ 3.54
CHKB-208ENST00000479003 PLPPR3Q6T4P5 718 aa37.14■■■■□ 3.54
CHKB-208ENST00000479003 SENP3Q9H4L4 574 aaPredicted RBP37.13■■■■□ 3.54
CHKB-208ENST00000479003 LRPPRCP42704 1394 aaKnown RBP37.13■■■■□ 3.53
CHKB-208ENST00000479003 DISP3Q9P2K9 1392 aa37.1■■■■□ 3.53
CHKB-208ENST00000479003 RIMS2Q9UQ26 1411 aa37.1■■■■□ 3.53
CHKB-208ENST00000479003 TMEM132EQ6IEE7 984 aa37.1■■■■□ 3.53
CHKB-208ENST00000479003 EIF3AQ14152 1382 aaKnown RBP37.09■■■■□ 3.53
CHKB-208ENST00000479003 NUDCQ9Y266 331 aa37.09■■■■□ 3.53
CHKB-208ENST00000479003 UBR1Q8IWV7 1749 aa37.09■■■■□ 3.53
CHKB-208ENST00000479003 RIMS1Q86UR5 1692 aaKnown RBP37.07■■■■□ 3.53
CHKB-208ENST00000479003 KDM5AP29375 1690 aaKnown RBP37.07■■■■□ 3.52
CHKB-208ENST00000479003 NLRP1Q9C000 1473 aa37.06■■■■□ 3.52
CHKB-208ENST00000479003 PARD3Q8TEW0 1356 aa37.05■■■■□ 3.52
CHKB-208ENST00000479003 ADAMTSL3P82987 1691 aa37.04■■■■□ 3.52
CHKB-208ENST00000479003 ASXL1Q8IXJ9 1541 aa37.02■■■■□ 3.52
CHKB-208ENST00000479003 PER1O15534 1290 aaPredicted RBP37.01■■■■□ 3.51
CHKB-208ENST00000479003 TMF1P82094 1093 aa37■■■■□ 3.51
CHKB-208ENST00000479003 RNF123Q5XPI4 1314 aa37■■■■□ 3.51
CHKB-208ENST00000479003 TRAK1Q9UPV9 953 aa37■■■■□ 3.51
CHKB-208ENST00000479003 MYO3AQ8NEV4 1616 aa36.99■■■■□ 3.51
CHKB-208ENST00000479003 ALKQ9UM73 1620 aa36.97■■■■□ 3.51
CHKB-208ENST00000479003 NLRP13Q86W25 1043 aa36.96■■■■□ 3.51
CHKB-208ENST00000479003 TMEM2Q9UHN6 1383 aa36.96■■■■□ 3.51
CHKB-208ENST00000479003 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.92■■■■□ 3.5
CHKB-208ENST00000479003 ARHGEF28Q8N1W1 1705 aaKnown RBP36.91■■■■□ 3.5
CHKB-208ENST00000479003 NRXN3Q9Y4C0 1643 aa36.9■■■■□ 3.5
CHKB-208ENST00000479003 CENPJQ9HC77 1338 aaPredicted RBP36.9■■■■□ 3.5
CHKB-208ENST00000479003 PTPRMP28827 1452 aa36.9■■■■□ 3.5
CHKB-208ENST00000479003 SETD1AO15047 1707 aaKnown RBP36.88■■■■□ 3.5
CHKB-208ENST00000479003 QRICH2Q9H0J4 1663 aa36.87■■■■□ 3.49
CHKB-208ENST00000479003 B4GALNT3Q6L9W6 998 aa36.87■■■■□ 3.49
CHKB-208ENST00000479003 SBNO2Q9Y2G9 1366 aa36.85■■■■□ 3.49
CHKB-208ENST00000479003 STK26Q9P289 416 aa36.84■■■■□ 3.49
CHKB-208ENST00000479003 HDGFP51858 240 aaKnown RBP36.83■■■■□ 3.49
CHKB-208ENST00000479003 YTHDC2Q9H6S0 1430 aaKnown RBP36.83■■■■□ 3.49
CHKB-208ENST00000479003 PANK3Q9H999 370 aa36.82■■■■□ 3.49
CHKB-208ENST00000479003 ANP32EQ9BTT0 268 aa36.82■■■■□ 3.48
CHKB-208ENST00000479003 LTKP29376 864 aa36.8■■■■□ 3.48
CHKB-208ENST00000479003 SLIT1O75093 1534 aa36.79■■■■□ 3.48
CHKB-208ENST00000479003 CEP170BQ9Y4F5 1589 aaPredicted RBP36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms