RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	KIF7	Q2M1P5	1343 aa		13.36	□□□□□ -0.27
ATG7-223	ENST00000478638	KIAA1210	Q9ULL0	1709 aa		13.36	□□□□□ -0.27
ATG7-223	ENST00000478638	NLRP1	Q9C000	1473 aa		13.36	□□□□□ -0.27
ATG7-223	ENST00000478638	ANP32C	O43423	234 aa		13.35	□□□□□ -0.27
ATG7-223	ENST00000478638	IFT172	Q9UG01	1749 aa		13.34	□□□□□ -0.27
ATG7-223	ENST00000478638	SPATA31D1	Q6ZQQ2	1576 aa		13.34	□□□□□ -0.27
ATG7-223	ENST00000478638	A2ML1	A8K2U0	1454 aa		13.34	□□□□□ -0.27
ATG7-223	ENST00000478638	SETD1B	Q9UPS6	1966 aa	Known RBP	13.34	□□□□□ -0.27
ATG7-223	ENST00000478638	ANKLE2	Q86XL3	938 aa		13.33	□□□□□ -0.28
ATG7-223	ENST00000478638	LMTK3	Q96Q04	1460 aa		13.33	□□□□□ -0.28
ATG7-223	ENST00000478638	HDGF	P51858	240 aa	Known RBP	13.32	□□□□□ -0.28
ATG7-223	ENST00000478638	ZNF326	Q5BKZ1	582 aa	Known RBP	13.32	□□□□□ -0.28
ATG7-223	ENST00000478638	EID1	Q9Y6B2	187 aa		13.32	□□□□□ -0.28
ATG7-223	ENST00000478638	ROCK2	O75116	1388 aa	Known RBP	13.32	□□□□□ -0.28
ATG7-223	ENST00000478638	IQGAP1	P46940	1657 aa		13.31	□□□□□ -0.28
ATG7-223	ENST00000478638	MYOM2	P54296	1465 aa		13.31	□□□□□ -0.28
ATG7-223	ENST00000478638	DCAF11	Q8TEB1	546 aa		13.31	□□□□□ -0.28
ATG7-223	ENST00000478638	TXNDC2	Q86VQ3	553 aa		13.3	□□□□□ -0.28
ATG7-223	ENST00000478638	DMRT2	Q9Y5R5	561 aa		13.3	□□□□□ -0.28
ATG7-223	ENST00000478638	NCKAP5L	Q9HCH0	1330 aa		13.3	□□□□□ -0.28
ATG7-223	ENST00000478638	KIF1B	O60333	1816 aa		13.29	□□□□□ -0.28
ATG7-223	ENST00000478638	NRXN1	Q9ULB1	1477 aa		13.29	□□□□□ -0.28
ATG7-223	ENST00000478638	ADGRB3	O60242	1522 aa		13.29	□□□□□ -0.28
ATG7-223	ENST00000478638	UGGT1	Q9NYU2	1555 aa		13.29	□□□□□ -0.28
ATG7-223	ENST00000478638	YTHDC1	Q96MU7	727 aa	Known RBP	13.29	□□□□□ -0.28
ATG7-223	ENST00000478638	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
ATG7-223	ENST00000478638	CARD11	Q9BXL7	1154 aa		13.28	□□□□□ -0.28
ATG7-223	ENST00000478638	PIK3C2B	O00750	1634 aa		13.28	□□□□□ -0.28
ATG7-223	ENST00000478638	PREX1	Q8TCU6	1659 aa		13.28	□□□□□ -0.28
ATG7-223	ENST00000478638	RGL3	Q3MIN7	710 aa		13.27	□□□□□ -0.29
ATG7-223	ENST00000478638	BCAN	Q96GW7	911 aa		13.27	□□□□□ -0.29
ATG7-223	ENST00000478638	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.27	□□□□□ -0.29
ATG7-223	ENST00000478638	CFAP65	Q6ZU64	1925 aa	Known RBP	13.27	□□□□□ -0.29
ATG7-223	ENST00000478638	SYNM	O15061	1565 aa		13.26	□□□□□ -0.29
ATG7-223	ENST00000478638	TMEM2	Q9UHN6	1383 aa		13.26	□□□□□ -0.29
ATG7-223	ENST00000478638	LTK	P29376	864 aa		13.25	□□□□□ -0.29
ATG7-223	ENST00000478638	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.25	□□□□□ -0.29
ATG7-223	ENST00000478638	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.25	□□□□□ -0.29
ATG7-223	ENST00000478638	MYO3A	Q8NEV4	1616 aa		13.24	□□□□□ -0.29
ATG7-223	ENST00000478638	KDM2A	Q9Y2K7	1162 aa		13.24	□□□□□ -0.29
ATG7-223	ENST00000478638	RPGRIP1L	Q68CZ1	1315 aa		13.23	□□□□□ -0.29
ATG7-223	ENST00000478638	GTF3C3	Q9Y5Q9	886 aa		13.23	□□□□□ -0.29
ATG7-223	ENST00000478638	RIMS2	Q9UQ26	1411 aa		13.22	□□□□□ -0.29
ATG7-223	ENST00000478638	PPL	O60437	1756 aa		13.22	□□□□□ -0.29
ATG7-223	ENST00000478638	ST20-MTHFS	A0A0A6YYL1	179 aa		13.22	□□□□□ -0.29
ATG7-223	ENST00000478638	VGF	O15240	615 aa	Predicted RBP	13.22	□□□□□ -0.29
ATG7-223	ENST00000478638	TESK2	Q96S53	571 aa		13.22	□□□□□ -0.29
ATG7-223	ENST00000478638	SENP3	Q9H4L4	574 aa	Predicted RBP	13.22	□□□□□ -0.29
ATG7-223	ENST00000478638	SETBP1	Q9Y6X0	1596 aa		13.22	□□□□□ -0.29
ATG7-223	ENST00000478638	NBPF1	Q3BBV0	1214 aa		13.21	□□□□□ -0.29
ATG7-223	ENST00000478638	KTN1	Q86UP2	1357 aa	Known RBP	13.2	□□□□□ -0.3
ATG7-223	ENST00000478638	SCAF11	Q99590	1463 aa	Known RBP	13.2	□□□□□ -0.3
ATG7-223	ENST00000478638	ZNF142	P52746	1687 aa	Predicted RBP	13.19	□□□□□ -0.3
ATG7-223	ENST00000478638	NPHP4	O75161	1426 aa	Predicted RBP	13.19	□□□□□ -0.3
ATG7-223	ENST00000478638	ARHGAP23	Q9P227	1491 aa		13.18	□□□□□ -0.3
ATG7-223	ENST00000478638	SLIT1	O75093	1534 aa		13.18	□□□□□ -0.3
ATG7-223	ENST00000478638	SLC26A8	Q96RN1	970 aa		13.17	□□□□□ -0.3
ATG7-223	ENST00000478638	ZFYVE9	O95405	1425 aa		13.16	□□□□□ -0.3
ATG7-223	ENST00000478638	PLEKHG1	Q9ULL1	1385 aa		13.16	□□□□□ -0.3
ATG7-223	ENST00000478638	SBNO2	Q9Y2G9	1366 aa		13.16	□□□□□ -0.3
ATG7-223	ENST00000478638	TMEM131L	A2VDJ0	1609 aa		13.15	□□□□□ -0.3
ATG7-223	ENST00000478638	UBR1	Q8IWV7	1749 aa		13.15	□□□□□ -0.3
ATG7-223	ENST00000478638	PIK3C2G	O75747	1445 aa		13.14	□□□□□ -0.31
ATG7-223	ENST00000478638	TBX22	Q9Y458	520 aa		13.14	□□□□□ -0.31
ATG7-223	ENST00000478638	DISP3	Q9P2K9	1392 aa		13.14	□□□□□ -0.31
ATG7-223	ENST00000478638	MED14	O60244	1454 aa		13.14	□□□□□ -0.31
ATG7-223	ENST00000478638	ADGRB1	O14514	1584 aa		13.14	□□□□□ -0.31
ATG7-223	ENST00000478638	NEXMIF	Q5QGS0	1516 aa		13.13	□□□□□ -0.31
ATG7-223	ENST00000478638	ADGRF5	Q8IZF2	1346 aa		13.13	□□□□□ -0.31
ATG7-223	ENST00000478638	PER1	O15534	1290 aa	Predicted RBP	13.12	□□□□□ -0.31
ATG7-223	ENST00000478638	KDM5A	P29375	1690 aa	Known RBP	13.12	□□□□□ -0.31
ATG7-223	ENST00000478638	MYOM1	P52179	1685 aa		13.12	□□□□□ -0.31
ATG7-223	ENST00000478638	PARD3	Q8TEW0	1356 aa		13.11	□□□□□ -0.31
ATG7-223	ENST00000478638	CCDC184	Q52MB2	194 aa		13.11	□□□□□ -0.31
ATG7-223	ENST00000478638	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.11	□□□□□ -0.31
ATG7-223	ENST00000478638	EIF3A	Q14152	1382 aa	Known RBP	13.1	□□□□□ -0.31
ATG7-223	ENST00000478638	SLC24A1	O60721	1099 aa		13.1	□□□□□ -0.31
ATG7-223	ENST00000478638	KCNA6	P17658	529 aa		13.09	□□□□□ -0.31
ATG7-223	ENST00000478638	TMF1	P82094	1093 aa		13.09	□□□□□ -0.31
ATG7-223	ENST00000478638	RALBP1	Q15311	655 aa		13.09	□□□□□ -0.31
ATG7-223	ENST00000478638	BRD4	O60885	1362 aa	Predicted RBP	13.08	□□□□□ -0.31
ATG7-223	ENST00000478638	INSR	P06213	1382 aa		13.08	□□□□□ -0.31
ATG7-223	ENST00000478638	STRC	Q7RTU9	1775 aa		13.08	□□□□□ -0.32
ATG7-223	ENST00000478638	LRPPRC	P42704	1394 aa	Known RBP	13.07	□□□□□ -0.32
ATG7-223	ENST00000478638	C14orf93	Q9H972	538 aa	Known RBP	13.07	□□□□□ -0.32
ATG7-223	ENST00000478638	AMOTL2	Q9Y2J4	779 aa		13.07	□□□□□ -0.32
ATG7-223	ENST00000478638	NPC1L1	Q9UHC9	1359 aa		13.07	□□□□□ -0.32
ATG7-223	ENST00000478638	CFAP70	Q5T0N1	1121 aa		13.06	□□□□□ -0.32
ATG7-223	ENST00000478638	PROSER2	Q86WR7	435 aa	Predicted RBP	13.06	□□□□□ -0.32
ATG7-223	ENST00000478638	ADAMTS13	Q76LX8	1427 aa		13.05	□□□□□ -0.32
ATG7-223	ENST00000478638	MYO5B	Q9ULV0	1848 aa		13.05	□□□□□ -0.32
ATG7-223	ENST00000478638	CDCA8	Q53HL2	280 aa		13.05	□□□□□ -0.32
ATG7-223	ENST00000478638	MRS2	Q9HD23	443 aa		13.05	□□□□□ -0.32
ATG7-223	ENST00000478638	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.05	□□□□□ -0.32
ATG7-223	ENST00000478638	TMEM132E	Q6IEE7	984 aa		13.04	□□□□□ -0.32
ATG7-223	ENST00000478638	CERK	Q8TCT0	537 aa		13.04	□□□□□ -0.32
ATG7-223	ENST00000478638	STK26	Q9P289	416 aa		13.04	□□□□□ -0.32
ATG7-223	ENST00000478638	ZBED9	Q6R2W3	1325 aa		13.04	□□□□□ -0.32
ATG7-223	ENST00000478638	MET	P08581	1390 aa		13.04	□□□□□ -0.32
ATG7-223	ENST00000478638	PIK3R4	Q99570	1358 aa		13.04	□□□□□ -0.32

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