RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
PDCD11-204ENST00000478543 PRDM15P57071 1507 aaPredicted RBP17.22■□□□□ 0.35
PDCD11-204ENST00000478543 PIK3C2BO00750 1634 aa17.22■□□□□ 0.35
PDCD11-204ENST00000478543 TXNDC2Q86VQ3 553 aa17.22■□□□□ 0.35
PDCD11-204ENST00000478543 KANK1Q14678 1352 aa17.21■□□□□ 0.35
PDCD11-204ENST00000478543 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
PDCD11-204ENST00000478543 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
PDCD11-204ENST00000478543 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
PDCD11-204ENST00000478543 MPHOSPH9Q99550 1183 aa17.19■□□□□ 0.34
PDCD11-204ENST00000478543 LRP6O75581 1613 aa17.18■□□□□ 0.34
PDCD11-204ENST00000478543 TET3O43151 1660 aa17.18■□□□□ 0.34
PDCD11-204ENST00000478543 PHLPP1O60346 1717 aa17.17■□□□□ 0.34
PDCD11-204ENST00000478543 UPF1Q92900 1129 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDCD11-204ENST00000478543 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
PDCD11-204ENST00000478543 COL16A1Q07092 1604 aaPredicted RBP17.15■□□□□ 0.34
PDCD11-204ENST00000478543 FOXD1Q16676 465 aa17.15■□□□□ 0.34
PDCD11-204ENST00000478543 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
PDCD11-204ENST00000478543 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
PDCD11-204ENST00000478543 KCNA6P17658 529 aa17.12■□□□□ 0.33
PDCD11-204ENST00000478543 SLC26A8Q96RN1 970 aa17.12■□□□□ 0.33
PDCD11-204ENST00000478543 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
PDCD11-204ENST00000478543 JCADQ9P266 1359 aa17.11■□□□□ 0.33
PDCD11-204ENST00000478543 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
PDCD11-204ENST00000478543 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
PDCD11-204ENST00000478543 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
PDCD11-204ENST00000478543 E9PCH4 1651 aa17.1■□□□□ 0.33
PDCD11-204ENST00000478543 NKTRP30414 1462 aaKnown RBP17.09■□□□□ 0.33
PDCD11-204ENST00000478543 KDM5AP29375 1690 aaKnown RBP17.09■□□□□ 0.33
PDCD11-204ENST00000478543 IDI1Q13907 227 aa17.06■□□□□ 0.32
PDCD11-204ENST00000478543 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
PDCD11-204ENST00000478543 MSH6P52701 1360 aa17.03■□□□□ 0.32
PDCD11-204ENST00000478543 ANKRD30BQ9BXX2 1392 aa17.03■□□□□ 0.32
PDCD11-204ENST00000478543 CLSPNQ9HAW4 1339 aa17.03■□□□□ 0.32
PDCD11-204ENST00000478543 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
PDCD11-204ENST00000478543 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
PDCD11-204ENST00000478543 ADGRB3O60242 1522 aa17.02■□□□□ 0.32
PDCD11-204ENST00000478543 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.32
PDCD11-204ENST00000478543 SHPRHQ149N8 1683 aa17.02■□□□□ 0.32
PDCD11-204ENST00000478543 RPRD2Q5VT52 1461 aaKnown RBP17.01■□□□□ 0.31
PDCD11-204ENST00000478543 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
PDCD11-204ENST00000478543 DIP2AQ14689 1571 aa17.01■□□□□ 0.31
PDCD11-204ENST00000478543 AHDC1Q5TGY3 1603 aaPredicted RBP17■□□□□ 0.31
PDCD11-204ENST00000478543 NOS1P29475 1434 aa16.99■□□□□ 0.31
PDCD11-204ENST00000478543 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
PDCD11-204ENST00000478543 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
PDCD11-204ENST00000478543 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
PDCD11-204ENST00000478543 ZFYVE9O95405 1425 aa16.98■□□□□ 0.31
PDCD11-204ENST00000478543 TRPM2O94759 1503 aa16.98■□□□□ 0.31
PDCD11-204ENST00000478543 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
PDCD11-204ENST00000478543 ZNF772Q68DY9 489 aaPredicted RBP16.97■□□□□ 0.31
PDCD11-204ENST00000478543 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.31
PDCD11-204ENST00000478543 CLTCL1P53675 1640 aa16.96■□□□□ 0.3
PDCD11-204ENST00000478543 CDK12Q9NYV4 1490 aaPredicted RBP16.95■□□□□ 0.3
PDCD11-204ENST00000478543 MEX3CQ5U5Q3 659 aaKnown RBP16.95■□□□□ 0.3
PDCD11-204ENST00000478543 EP400Q96L91 3159 aa16.95■□□□□ 0.3
PDCD11-204ENST00000478543 RXRBP28702 533 aa16.94■□□□□ 0.3
PDCD11-204ENST00000478543 RGS12O14924 1447 aa16.94■□□□□ 0.3
PDCD11-204ENST00000478543 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
PDCD11-204ENST00000478543 AFF2P51816 1311 aa16.91■□□□□ 0.3
PDCD11-204ENST00000478543 ADAMTS13Q76LX8 1427 aa16.9■□□□□ 0.3
PDCD11-204ENST00000478543 TMEM131LA2VDJ0 1609 aa16.9■□□□□ 0.3
PDCD11-204ENST00000478543 TONSLQ96HA7 1378 aa16.89■□□□□ 0.3
PDCD11-204ENST00000478543 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
PDCD11-204ENST00000478543 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
PDCD11-204ENST00000478543 NUTM2AQ8IVF1 878 aaPredicted RBP16.89■□□□□ 0.29
PDCD11-204ENST00000478543 BCANQ96GW7 911 aa16.89■□□□□ 0.29
PDCD11-204ENST00000478543 RIMS2Q9UQ26 1411 aa16.88■□□□□ 0.29
PDCD11-204ENST00000478543 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
PDCD11-204ENST00000478543 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
PDCD11-204ENST00000478543 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
PDCD11-204ENST00000478543 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
PDCD11-204ENST00000478543 KIF1BO60333 1816 aa16.86■□□□□ 0.29
PDCD11-204ENST00000478543 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
PDCD11-204ENST00000478543 PTPRUQ92729 1446 aa16.86■□□□□ 0.29
PDCD11-204ENST00000478543 ASXL1Q8IXJ9 1541 aa16.86■□□□□ 0.29
PDCD11-204ENST00000478543 RGL3Q3MIN7 710 aa16.85■□□□□ 0.29
PDCD11-204ENST00000478543 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
PDCD11-204ENST00000478543 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
PDCD11-204ENST00000478543 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
PDCD11-204ENST00000478543 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
PDCD11-204ENST00000478543 SPATA31E1Q6ZUB1 1445 aa16.83■□□□□ 0.28
PDCD11-204ENST00000478543 C14orf37Q86TY3 774 aa16.83■□□□□ 0.28
PDCD11-204ENST00000478543 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
PDCD11-204ENST00000478543 L3MBTL2Q969R5 705 aa16.83■□□□□ 0.28
PDCD11-204ENST00000478543 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.28
PDCD11-204ENST00000478543 ATF3P18847 181 aa16.81■□□□□ 0.28
PDCD11-204ENST00000478543 DDX17Q92841 729 aaKnown RBP16.81■□□□□ 0.28
PDCD11-204ENST00000478543 MST1RQ04912 1400 aa16.8■□□□□ 0.28
PDCD11-204ENST00000478543 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
PDCD11-204ENST00000478543 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
PDCD11-204ENST00000478543 C8orf37Q96NL8 207 aa16.8■□□□□ 0.28
PDCD11-204ENST00000478543 QTRT2Q9H974 415 aaKnown RBP16.8■□□□□ 0.28
PDCD11-204ENST00000478543 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
PDCD11-204ENST00000478543 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
PDCD11-204ENST00000478543 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
PDCD11-204ENST00000478543 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
PDCD11-204ENST00000478543 RBM6P78332 1123 aaKnown RBP16.78■□□□□ 0.28
PDCD11-204ENST00000478543 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
PDCD11-204ENST00000478543 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
PDCD11-204ENST00000478543 PIK3R4Q99570 1358 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms