RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 FECHP22830 423 aa12.49□□□□□ -0.41
ITGA4-209ENST00000478440 METTL3Q86U44 580 aaKnown RBP12.49□□□□□ -0.41
ITGA4-209ENST00000478440 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
ITGA4-209ENST00000478440 TMEM134Q9H6X4 195 aa12.48□□□□□ -0.41
ITGA4-209ENST00000478440 RNF40O75150 1001 aa12.47□□□□□ -0.41
ITGA4-209ENST00000478440 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
ITGA4-209ENST00000478440 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
ITGA4-209ENST00000478440 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.41
ITGA4-209ENST00000478440 WBP1LQ9NX94 342 aa12.46□□□□□ -0.41
ITGA4-209ENST00000478440 PRR14Q9BWN1 585 aa12.45□□□□□ -0.42
ITGA4-209ENST00000478440 IRF6O14896 467 aa12.44□□□□□ -0.42
ITGA4-209ENST00000478440 ZC3H15Q8WU90 426 aaKnown RBP12.43□□□□□ -0.42
ITGA4-209ENST00000478440 Q6ZNB5 142 aa12.41□□□□□ -0.42
ITGA4-209ENST00000478440 KRI1Q8N9T8 703 aaKnown RBP12.41□□□□□ -0.42
ITGA4-209ENST00000478440 A0A0G2JS52 829 aa12.4□□□□□ -0.42
ITGA4-209ENST00000478440 ZMYND10O75800 440 aa12.4□□□□□ -0.42
ITGA4-209ENST00000478440 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
ITGA4-209ENST00000478440 DAXXQ9UER7 740 aaPredicted RBP12.39□□□□□ -0.43
ITGA4-209ENST00000478440 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
ITGA4-209ENST00000478440 KMT5BQ4FZB7 885 aa12.36□□□□□ -0.43
ITGA4-209ENST00000478440 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
ITGA4-209ENST00000478440 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
ITGA4-209ENST00000478440 KCNC4Q03721 635 aa12.31□□□□□ -0.44
ITGA4-209ENST00000478440 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
ITGA4-209ENST00000478440 CLCN1P35523 988 aa12.3□□□□□ -0.44
ITGA4-209ENST00000478440 APLP1P51693 650 aa12.3□□□□□ -0.44
ITGA4-209ENST00000478440 CFHP08603 1231 aa12.29□□□□□ -0.44
ITGA4-209ENST00000478440 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
ITGA4-209ENST00000478440 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
ITGA4-209ENST00000478440 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
ITGA4-209ENST00000478440 AK7Q96M32 723 aa12.27□□□□□ -0.45
ITGA4-209ENST00000478440 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
ITGA4-209ENST00000478440 SLC10A3P09131 477 aa12.26□□□□□ -0.45
ITGA4-209ENST00000478440 GPCPD1Q9NPB8 672 aa12.26□□□□□ -0.45
ITGA4-209ENST00000478440 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
ITGA4-209ENST00000478440 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
ITGA4-209ENST00000478440 NLRP7Q8WX94 980 aa12.25□□□□□ -0.45
ITGA4-209ENST00000478440 MTRQ99707 1265 aa12.24□□□□□ -0.45
ITGA4-209ENST00000478440 AMHR2Q16671 573 aa12.23□□□□□ -0.45
ITGA4-209ENST00000478440 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
ITGA4-209ENST00000478440 TTLL12Q14166 644 aaPredicted RBP12.21□□□□□ -0.45
ITGA4-209ENST00000478440 GCGRP47871 477 aa12.2□□□□□ -0.46
ITGA4-209ENST00000478440 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
ITGA4-209ENST00000478440 NR1I2O75469 434 aa12.19□□□□□ -0.46
ITGA4-209ENST00000478440 CD46P15529 392 aa12.18□□□□□ -0.46
ITGA4-209ENST00000478440 COPS2P61201 443 aa12.18□□□□□ -0.46
ITGA4-209ENST00000478440 TMUB1Q9BVT8 246 aa12.17□□□□□ -0.46
ITGA4-209ENST00000478440 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
ITGA4-209ENST00000478440 TRIM66O15016 1216 aa12.16□□□□□ -0.46
ITGA4-209ENST00000478440 BLOC1S3Q6QNY0 202 aa12.16□□□□□ -0.46
ITGA4-209ENST00000478440 ZPR1O75312 459 aa12.15□□□□□ -0.46
ITGA4-209ENST00000478440 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
ITGA4-209ENST00000478440 SLC24A3Q9HC58 644 aa12.15□□□□□ -0.46
ITGA4-209ENST00000478440 USP46P62068 366 aa12.14□□□□□ -0.47
ITGA4-209ENST00000478440 LCE2BO14633 110 aa12.13□□□□□ -0.47
ITGA4-209ENST00000478440 GGCXP38435 758 aa12.13□□□□□ -0.47
ITGA4-209ENST00000478440 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
ITGA4-209ENST00000478440 FUT2Q10981 343 aa12.12□□□□□ -0.47
ITGA4-209ENST00000478440 KDM4AO75164 1064 aa12.11□□□□□ -0.47
ITGA4-209ENST00000478440 ZNF516Q92618 1163 aa12.11□□□□□ -0.47
ITGA4-209ENST00000478440 GIGYF2Q6Y7W6 1299 aaKnown RBP12.1□□□□□ -0.47
ITGA4-209ENST00000478440 NUTM1Q86Y26 1132 aa12.1□□□□□ -0.47
ITGA4-209ENST00000478440 PDE4DQ08499 809 aa12.09□□□□□ -0.47
ITGA4-209ENST00000478440 LAPTM4AQ15012 233 aa12.09□□□□□ -0.47
ITGA4-209ENST00000478440 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
ITGA4-209ENST00000478440 MORN1Q5T089 497 aa12.08□□□□□ -0.48
ITGA4-209ENST00000478440 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
ITGA4-209ENST00000478440 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
ITGA4-209ENST00000478440 PUS10Q3MIT2 529 aaKnown RBP12.07□□□□□ -0.48
ITGA4-209ENST00000478440 PARP9Q8IXQ6 854 aa12.07□□□□□ -0.48
ITGA4-209ENST00000478440 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
ITGA4-209ENST00000478440 Q3C1V9 767 aa12.06□□□□□ -0.48
ITGA4-209ENST00000478440 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
ITGA4-209ENST00000478440 ADH1BP00325 375 aa12.05□□□□□ -0.48
ITGA4-209ENST00000478440 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
ITGA4-209ENST00000478440 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
ITGA4-209ENST00000478440 PPP1R18Q6NYC8 613 aa12.02□□□□□ -0.49
ITGA4-209ENST00000478440 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
ITGA4-209ENST00000478440 SPSB2Q99619 263 aa12.02□□□□□ -0.49
ITGA4-209ENST00000478440 SLC27A5Q9Y2P5 690 aa12.02□□□□□ -0.49
ITGA4-209ENST00000478440 HOXA2O43364 376 aa12.01□□□□□ -0.49
ITGA4-209ENST00000478440 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
ITGA4-209ENST00000478440 TLL1O43897 1013 aa11.99□□□□□ -0.49
ITGA4-209ENST00000478440 SLC6A16Q9GZN6 736 aa11.99□□□□□ -0.49
ITGA4-209ENST00000478440 BRICD5Q6PL45 260 aa11.97□□□□□ -0.49
ITGA4-209ENST00000478440 SPIRE2Q8WWL2 714 aa11.97□□□□□ -0.49
ITGA4-209ENST00000478440 THAP11Q96EK4 314 aa11.97□□□□□ -0.49
ITGA4-209ENST00000478440 MS4A1P11836 297 aa11.96□□□□□ -0.49
ITGA4-209ENST00000478440 GJA5P36382 358 aa11.95□□□□□ -0.5
ITGA4-209ENST00000478440 ANKLE1Q8NAG6 615 aa11.94□□□□□ -0.5
ITGA4-209ENST00000478440 GFRA3O60609 400 aa11.93□□□□□ -0.5
ITGA4-209ENST00000478440 S1PR4O95977 384 aa11.93□□□□□ -0.5
ITGA4-209ENST00000478440 FDX1P10109 184 aa11.93□□□□□ -0.5
ITGA4-209ENST00000478440 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
ITGA4-209ENST00000478440 MSS51Q4VC12 460 aa11.93□□□□□ -0.5
ITGA4-209ENST00000478440 USB1Q9BQ65 265 aaKnown RBP11.92□□□□□ -0.5
ITGA4-209ENST00000478440 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
ITGA4-209ENST00000478440 V9GY48 417 aaPredicted RBP11.92□□□□□ -0.5
ITGA4-209ENST00000478440 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
ITGA4-209ENST00000478440 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms