RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TRIM6-TRIM34B2RNG4 842 aa17.8■□□□□ 0.44
NPHP4-208ENST00000478423 TEFQ10587 303 aa17.8■□□□□ 0.44
NPHP4-208ENST00000478423 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
NPHP4-208ENST00000478423 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
NPHP4-208ENST00000478423 HMOX1P09601 288 aa17.79■□□□□ 0.44
NPHP4-208ENST00000478423 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
NPHP4-208ENST00000478423 GOLGA6L4A6NEF3 574 aa17.79■□□□□ 0.44
NPHP4-208ENST00000478423 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
NPHP4-208ENST00000478423 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
NPHP4-208ENST00000478423 PDE4AP27815 886 aa17.78■□□□□ 0.44
NPHP4-208ENST00000478423 PSME1Q06323 249 aa17.78■□□□□ 0.44
NPHP4-208ENST00000478423 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
NPHP4-208ENST00000478423 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
NPHP4-208ENST00000478423 PRAM1Q96QH2 718 aa17.77■□□□□ 0.43
NPHP4-208ENST00000478423 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.43
NPHP4-208ENST00000478423 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.43
NPHP4-208ENST00000478423 CDCA7LQ96GN5 454 aa17.76■□□□□ 0.43
NPHP4-208ENST00000478423 CUL7Q14999 1698 aa17.76■□□□□ 0.43
NPHP4-208ENST00000478423 C1orf141Q5JVX7 400 aa17.76■□□□□ 0.43
NPHP4-208ENST00000478423 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
NPHP4-208ENST00000478423 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
NPHP4-208ENST00000478423 TXNDC2Q86VQ3 553 aa17.75■□□□□ 0.43
NPHP4-208ENST00000478423 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
NPHP4-208ENST00000478423 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
NPHP4-208ENST00000478423 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
NPHP4-208ENST00000478423 GORABQ5T7V8 394 aa17.74■□□□□ 0.43
NPHP4-208ENST00000478423 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
NPHP4-208ENST00000478423 DDX19BQ9UMR2 479 aa17.73■□□□□ 0.43
NPHP4-208ENST00000478423 ABCC5O15440 1437 aa17.73■□□□□ 0.43
NPHP4-208ENST00000478423 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
NPHP4-208ENST00000478423 DEKP35659 375 aaKnown RBP17.73■□□□□ 0.43
NPHP4-208ENST00000478423 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
NPHP4-208ENST00000478423 RTN4Q9NQC3 1192 aaKnown RBP17.72■□□□□ 0.43
NPHP4-208ENST00000478423 EIF2S2P20042 333 aaKnown RBP17.72■□□□□ 0.43
NPHP4-208ENST00000478423 CCDC184Q52MB2 194 aa17.72■□□□□ 0.43
NPHP4-208ENST00000478423 DNTTIP2Q5QJE6 756 aaKnown RBP17.72■□□□□ 0.43
NPHP4-208ENST00000478423 NLRP6P59044 892 aa17.72■□□□□ 0.43
NPHP4-208ENST00000478423 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
NPHP4-208ENST00000478423 GPATCH3Q96I76 525 aa17.72■□□□□ 0.43
NPHP4-208ENST00000478423 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
NPHP4-208ENST00000478423 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
NPHP4-208ENST00000478423 GBP4Q96PP9 640 aa17.71■□□□□ 0.43
NPHP4-208ENST00000478423 ANKRD30BQ9BXX2 1392 aa17.71■□□□□ 0.43
NPHP4-208ENST00000478423 CCDC141Q6ZP82 1450 aa17.7■□□□□ 0.42
NPHP4-208ENST00000478423 GNAI1P63096 354 aa17.7■□□□□ 0.42
NPHP4-208ENST00000478423 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
NPHP4-208ENST00000478423 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
NPHP4-208ENST00000478423 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
NPHP4-208ENST00000478423 CDK11BP21127 795 aaKnown RBP17.68■□□□□ 0.42
NPHP4-208ENST00000478423 CAMSAP2Q08AD1 1489 aa17.68■□□□□ 0.42
NPHP4-208ENST00000478423 PANK1Q8TE04 598 aa17.68■□□□□ 0.42
NPHP4-208ENST00000478423 NCOA1Q15788 1441 aa17.67■□□□□ 0.42
NPHP4-208ENST00000478423 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
NPHP4-208ENST00000478423 EVA1CP58658 441 aa17.66■□□□□ 0.42
NPHP4-208ENST00000478423 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
NPHP4-208ENST00000478423 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
NPHP4-208ENST00000478423 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
NPHP4-208ENST00000478423 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
NPHP4-208ENST00000478423 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
NPHP4-208ENST00000478423 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
NPHP4-208ENST00000478423 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
NPHP4-208ENST00000478423 TSPYL4Q9UJ04 414 aa17.65■□□□□ 0.42
NPHP4-208ENST00000478423 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-208ENST00000478423 PRKAR2BP31323 418 aa17.64■□□□□ 0.42
NPHP4-208ENST00000478423 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
NPHP4-208ENST00000478423 CDK19Q9BWU1 502 aa17.64■□□□□ 0.41
NPHP4-208ENST00000478423 L1TD1Q5T7N2 865 aaKnown RBP17.64■□□□□ 0.41
NPHP4-208ENST00000478423 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
NPHP4-208ENST00000478423 SLC26A8Q96RN1 970 aa17.64■□□□□ 0.41
NPHP4-208ENST00000478423 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
NPHP4-208ENST00000478423 C9orf78Q9NZ63 289 aaPredicted RBP17.63■□□□□ 0.41
NPHP4-208ENST00000478423 ATF3P18847 181 aa17.62■□□□□ 0.41
NPHP4-208ENST00000478423 RPGRIP1LQ68CZ1 1315 aa17.62■□□□□ 0.41
NPHP4-208ENST00000478423 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
NPHP4-208ENST00000478423 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-208ENST00000478423 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
NPHP4-208ENST00000478423 CD109Q6YHK3 1445 aa17.61■□□□□ 0.41
NPHP4-208ENST00000478423 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-208ENST00000478423 RAPGEF4Q8WZA2 1011 aa17.61■□□□□ 0.41
NPHP4-208ENST00000478423 ST18O60284 1047 aa17.61■□□□□ 0.41
NPHP4-208ENST00000478423 GNL2Q13823 731 aaKnown RBP17.6■□□□□ 0.41
NPHP4-208ENST00000478423 LNPKQ9C0E8 428 aa17.6■□□□□ 0.41
NPHP4-208ENST00000478423 GLIPR1L2Q4G1C9 344 aa17.6■□□□□ 0.41
NPHP4-208ENST00000478423 NLRP2Q9NX02 1062 aa17.59■□□□□ 0.41
NPHP4-208ENST00000478423 TULP1O00294 542 aaPredicted RBP17.59■□□□□ 0.41
NPHP4-208ENST00000478423 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
NPHP4-208ENST00000478423 ISY1Q9ULR0 285 aaKnown RBP17.59■□□□□ 0.41
NPHP4-208ENST00000478423 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
NPHP4-208ENST00000478423 NAP1L5Q96NT1 182 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-208ENST00000478423 TSR2Q969E8 191 aaKnown RBP17.56■□□□□ 0.4
NPHP4-208ENST00000478423 ZNF692Q9BU19 519 aaPredicted RBP17.56■□□□□ 0.4
NPHP4-208ENST00000478423 ADGRL1O94910 1474 aa17.55■□□□□ 0.4
NPHP4-208ENST00000478423 PTMSP20962 102 aa17.55■□□□□ 0.4
NPHP4-208ENST00000478423 PROSER2Q86WR7 435 aaPredicted RBP17.55■□□□□ 0.4
NPHP4-208ENST00000478423 KIF14Q15058 1648 aa17.55■□□□□ 0.4
NPHP4-208ENST00000478423 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
NPHP4-208ENST00000478423 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
NPHP4-208ENST00000478423 NRDCO43847 1150 aa17.54■□□□□ 0.4
NPHP4-208ENST00000478423 HSP90B1P14625 803 aaKnown RBP17.54■□□□□ 0.4
NPHP4-208ENST00000478423 GPRASP1Q5JY77 1395 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms