RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 SETBP1Q9Y6X0 1596 aa11.15□□□□□ -0.62
PTPRD-209ENST00000477552 CLTCL1P53675 1640 aa11.14□□□□□ -0.63
PTPRD-209ENST00000477552 MAP3K4Q9Y6R4 1608 aa11.14□□□□□ -0.63
PTPRD-209ENST00000477552 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
PTPRD-209ENST00000477552 IFT172Q9UG01 1749 aa11.14□□□□□ -0.63
PTPRD-209ENST00000477552 MYO3AQ8NEV4 1616 aa11.13□□□□□ -0.63
PTPRD-209ENST00000477552 RPGRIP1LQ68CZ1 1315 aa11.13□□□□□ -0.63
PTPRD-209ENST00000477552 PIK3C2GO75747 1445 aa11.13□□□□□ -0.63
PTPRD-209ENST00000477552 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
PTPRD-209ENST00000477552 ASXL1Q8IXJ9 1541 aa11.13□□□□□ -0.63
PTPRD-209ENST00000477552 MLH3Q9UHC1 1453 aa11.12□□□□□ -0.63
PTPRD-209ENST00000477552 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
PTPRD-209ENST00000477552 ASXL2Q76L83 1435 aa11.11□□□□□ -0.63
PTPRD-209ENST00000477552 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
PTPRD-209ENST00000477552 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
PTPRD-209ENST00000477552 ERICH6Q7L0X2 663 aa11.11□□□□□ -0.63
PTPRD-209ENST00000477552 NEO1Q92859 1461 aa11.11□□□□□ -0.63
PTPRD-209ENST00000477552 PANK3Q9H999 370 aa11.1□□□□□ -0.63
PTPRD-209ENST00000477552 RCAN3Q9UKA8 241 aa11.1□□□□□ -0.63
PTPRD-209ENST00000477552 DISP3Q9P2K9 1392 aa11.1□□□□□ -0.63
PTPRD-209ENST00000477552 NRXN1Q9ULB1 1477 aa11.1□□□□□ -0.63
PTPRD-209ENST00000477552 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
PTPRD-209ENST00000477552 ZC3H13Q5T200 1668 aaKnown RBP11.09□□□□□ -0.63
PTPRD-209ENST00000477552 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.09□□□□□ -0.63
PTPRD-209ENST00000477552 HECW2Q9P2P5 1572 aa11.08□□□□□ -0.64
PTPRD-209ENST00000477552 KIF3BO15066 747 aa11.08□□□□□ -0.64
PTPRD-209ENST00000477552 RRP1P56182 461 aaKnown RBP11.08□□□□□ -0.64
PTPRD-209ENST00000477552 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPRD-209ENST00000477552 AFAP1Q8N556 730 aa11.08□□□□□ -0.64
PTPRD-209ENST00000477552 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
PTPRD-209ENST00000477552 MS4A1P11836 297 aa11.07□□□□□ -0.64
PTPRD-209ENST00000477552 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
PTPRD-209ENST00000477552 ADGRB3O60242 1522 aa11.07□□□□□ -0.64
PTPRD-209ENST00000477552 POGZQ7Z3K3 1410 aa11.07□□□□□ -0.64
PTPRD-209ENST00000477552 ABCA6Q8N139 1617 aa11.06□□□□□ -0.64
PTPRD-209ENST00000477552 PPLO60437 1756 aa11.05□□□□□ -0.64
PTPRD-209ENST00000477552 MYOM1P52179 1685 aa11.05□□□□□ -0.64
PTPRD-209ENST00000477552 PPRC1Q5VV67 1664 aaKnown RBP11.05□□□□□ -0.64
PTPRD-209ENST00000477552 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
PTPRD-209ENST00000477552 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
PTPRD-209ENST00000477552 USP32Q8NFA0 1604 aa11.05□□□□□ -0.64
PTPRD-209ENST00000477552 ARHGAP31Q2M1Z3 1444 aa11.04□□□□□ -0.64
PTPRD-209ENST00000477552 CD109Q6YHK3 1445 aa11.04□□□□□ -0.64
PTPRD-209ENST00000477552 AAMPQ13685 434 aa11.04□□□□□ -0.64
PTPRD-209ENST00000477552 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
PTPRD-209ENST00000477552 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
PTPRD-209ENST00000477552 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
PTPRD-209ENST00000477552 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
PTPRD-209ENST00000477552 PPP2R1AP30153 589 aa11.02□□□□□ -0.65
PTPRD-209ENST00000477552 NSD2O96028 1365 aa11.02□□□□□ -0.65
PTPRD-209ENST00000477552 ZFYVE9O95405 1425 aa11.01□□□□□ -0.65
PTPRD-209ENST00000477552 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
PTPRD-209ENST00000477552 PIK3C2BO00750 1634 aa11□□□□□ -0.65
PTPRD-209ENST00000477552 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
PTPRD-209ENST00000477552 GOLGA2Q08379 1002 aa11□□□□□ -0.65
PTPRD-209ENST00000477552 CENPJQ9HC77 1338 aaPredicted RBP11□□□□□ -0.65
PTPRD-209ENST00000477552 POLR3AO14802 1390 aaPredicted RBP11□□□□□ -0.65
PTPRD-209ENST00000477552 ERVK-7P63135 1459 aa11□□□□□ -0.65
PTPRD-209ENST00000477552 CAMSAP1Q5T5Y3 1602 aa10.99□□□□□ -0.65
PTPRD-209ENST00000477552 PPP6R1Q9UPN7 881 aa10.99□□□□□ -0.65
PTPRD-209ENST00000477552 C14orf93Q9H972 538 aaKnown RBP10.98□□□□□ -0.65
PTPRD-209ENST00000477552 SLC52A1Q9NWF4 448 aa10.98□□□□□ -0.65
PTPRD-209ENST00000477552 NOS1P29475 1434 aa10.98□□□□□ -0.65
PTPRD-209ENST00000477552 ABCC3O15438 1527 aa10.98□□□□□ -0.65
PTPRD-209ENST00000477552 GLI2P10070 1586 aa10.98□□□□□ -0.65
PTPRD-209ENST00000477552 MROH2AA6NES4 1674 aa10.98□□□□□ -0.65
PTPRD-209ENST00000477552 QRICH2Q9H0J4 1663 aa10.98□□□□□ -0.65
PTPRD-209ENST00000477552 ZNF521Q96K83 1311 aa10.97□□□□□ -0.65
PTPRD-209ENST00000477552 NPATQ14207 1427 aa10.96□□□□□ -0.65
PTPRD-209ENST00000477552 E9PSI1 815 aa10.96□□□□□ -0.65
PTPRD-209ENST00000477552 ADAMTS8Q9UP79 889 aa10.96□□□□□ -0.65
PTPRD-209ENST00000477552 FRMPD1Q5SYB0 1578 aa10.95□□□□□ -0.66
PTPRD-209ENST00000477552 CGNL1Q0VF96 1302 aa10.95□□□□□ -0.66
PTPRD-209ENST00000477552 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
PTPRD-209ENST00000477552 CFAP53Q96M91 514 aa10.95□□□□□ -0.66
PTPRD-209ENST00000477552 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
PTPRD-209ENST00000477552 NKTRP30414 1462 aaKnown RBP10.94□□□□□ -0.66
PTPRD-209ENST00000477552 EVC2Q86UK5 1308 aa10.94□□□□□ -0.66
PTPRD-209ENST00000477552 CENPQQ7L2Z9 268 aaPredicted RBP10.94□□□□□ -0.66
PTPRD-209ENST00000477552 TRMT2AQ8IZ69 625 aaKnown RBP10.94□□□□□ -0.66
PTPRD-209ENST00000477552 IPO9Q96P70 1041 aaKnown RBP10.94□□□□□ -0.66
PTPRD-209ENST00000477552 RICTORQ6R327 1708 aa10.94□□□□□ -0.66
PTPRD-209ENST00000477552 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
PTPRD-209ENST00000477552 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
PTPRD-209ENST00000477552 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
PTPRD-209ENST00000477552 NOP58Q9Y2X3 529 aaKnown RBP10.93□□□□□ -0.66
PTPRD-209ENST00000477552 UGGT1Q9NYU2 1555 aa10.93□□□□□ -0.66
PTPRD-209ENST00000477552 DIP2CQ9Y2E4 1556 aa10.93□□□□□ -0.66
PTPRD-209ENST00000477552 ADGRF5Q8IZF2 1346 aa10.92□□□□□ -0.66
PTPRD-209ENST00000477552 SLFN5Q08AF3 891 aa10.92□□□□□ -0.66
PTPRD-209ENST00000477552 DUSP27Q5VZP5 1158 aa10.92□□□□□ -0.66
PTPRD-209ENST00000477552 PNNQ9H307 717 aaKnown RBP10.92□□□□□ -0.66
PTPRD-209ENST00000477552 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
PTPRD-209ENST00000477552 PDE3AQ14432 1141 aa10.91□□□□□ -0.66
PTPRD-209ENST00000477552 CCDC27Q2M243 656 aa10.91□□□□□ -0.66
PTPRD-209ENST00000477552 EXOC6Q8TAG9 804 aa10.91□□□□□ -0.66
PTPRD-209ENST00000477552 ZBTB47Q9UFB7 747 aaPredicted RBP10.91□□□□□ -0.66
PTPRD-209ENST00000477552 ARHGEF28Q8N1W1 1705 aaKnown RBP10.91□□□□□ -0.66
PTPRD-209ENST00000477552 ZMYM3Q14202 1370 aa10.9□□□□□ -0.66
PTPRD-209ENST00000477552 NEXMIFQ5QGS0 1516 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms