RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
HLA-DMA-208ENST00000477541 SYCP2Q9BX26 1530 aa17.74■□□□□ 0.43
HLA-DMA-208ENST00000477541 ZCCHC11Q5TAX3 1644 aaKnown RBP17.74■□□□□ 0.43
HLA-DMA-208ENST00000477541 PIK3C2GO75747 1445 aa17.74■□□□□ 0.43
HLA-DMA-208ENST00000477541 HNRNPMP52272 730 aaKnown RBP eCLIP17.73■□□□□ 0.43
HLA-DMA-208ENST00000477541 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
HLA-DMA-208ENST00000477541 NPM2Q86SE8 214 aaKnown RBP17.73■□□□□ 0.43
HLA-DMA-208ENST00000477541 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
HLA-DMA-208ENST00000477541 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
HLA-DMA-208ENST00000477541 CRBNQ96SW2 442 aa17.72■□□□□ 0.43
HLA-DMA-208ENST00000477541 KIAA1210Q9ULL0 1709 aa17.71■□□□□ 0.43
HLA-DMA-208ENST00000477541 NEURL4Q96JN8 1562 aa17.71■□□□□ 0.43
HLA-DMA-208ENST00000477541 PTPRMP28827 1452 aa17.71■□□□□ 0.43
HLA-DMA-208ENST00000477541 WDR7Q9Y4E6 1490 aa17.71■□□□□ 0.43
HLA-DMA-208ENST00000477541 SOCS7O14512 581 aa17.71■□□□□ 0.43
HLA-DMA-208ENST00000477541 CDCA7LQ96GN5 454 aa17.71■□□□□ 0.43
HLA-DMA-208ENST00000477541 PANK3Q9H999 370 aa17.71■□□□□ 0.43
HLA-DMA-208ENST00000477541 SPHKAPQ2M3C7 1700 aa17.71■□□□□ 0.42
HLA-DMA-208ENST00000477541 SCAPERQ9BY12 1400 aa17.7■□□□□ 0.42
HLA-DMA-208ENST00000477541 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
HLA-DMA-208ENST00000477541 ARHGAP5Q13017 1502 aa17.7■□□□□ 0.42
HLA-DMA-208ENST00000477541 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
HLA-DMA-208ENST00000477541 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
HLA-DMA-208ENST00000477541 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
HLA-DMA-208ENST00000477541 CEP152O94986 1710 aa17.68■□□□□ 0.42
HLA-DMA-208ENST00000477541 ASXL1Q8IXJ9 1541 aa17.68■□□□□ 0.42
HLA-DMA-208ENST00000477541 ADAMTSL3P82987 1691 aa17.68■□□□□ 0.42
HLA-DMA-208ENST00000477541 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
HLA-DMA-208ENST00000477541 FAM161AQ3B820 660 aa17.67■□□□□ 0.42
HLA-DMA-208ENST00000477541 CD109Q6YHK3 1445 aa17.67■□□□□ 0.42
HLA-DMA-208ENST00000477541 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
HLA-DMA-208ENST00000477541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DMA-208ENST00000477541 CC2D1BQ5T0F9 858 aaKnown RBP17.66■□□□□ 0.42
HLA-DMA-208ENST00000477541 TRPM2O94759 1503 aa17.66■□□□□ 0.42
HLA-DMA-208ENST00000477541 SCAF11Q99590 1463 aaKnown RBP17.65■□□□□ 0.42
HLA-DMA-208ENST00000477541 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
HLA-DMA-208ENST00000477541 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
HLA-DMA-208ENST00000477541 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
HLA-DMA-208ENST00000477541 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
HLA-DMA-208ENST00000477541 SALL2Q9Y467 1007 aaPredicted RBP17.64■□□□□ 0.41
HLA-DMA-208ENST00000477541 KNSTRNQ9Y448 316 aa17.64■□□□□ 0.41
HLA-DMA-208ENST00000477541 LAS1LQ9Y4W2 734 aaKnown RBP17.64■□□□□ 0.41
HLA-DMA-208ENST00000477541 MYOM1P52179 1685 aa17.63■□□□□ 0.41
HLA-DMA-208ENST00000477541 ARAP3Q8WWN8 1544 aa17.63■□□□□ 0.41
HLA-DMA-208ENST00000477541 ILDR2Q71H61 639 aa17.63■□□□□ 0.41
HLA-DMA-208ENST00000477541 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
HLA-DMA-208ENST00000477541 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
HLA-DMA-208ENST00000477541 SENP3-EIF4A1A0A087X0R7 540 aa17.61■□□□□ 0.41
HLA-DMA-208ENST00000477541 PLIN1O60240 522 aa17.61■□□□□ 0.41
HLA-DMA-208ENST00000477541 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
HLA-DMA-208ENST00000477541 PLEKHH1Q9ULM0 1364 aa17.61■□□□□ 0.41
HLA-DMA-208ENST00000477541 GSE1Q14687 1217 aa17.61■□□□□ 0.41
HLA-DMA-208ENST00000477541 RGL3Q3MIN7 710 aa17.61■□□□□ 0.41
HLA-DMA-208ENST00000477541 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
HLA-DMA-208ENST00000477541 NKTRP30414 1462 aaKnown RBP17.6■□□□□ 0.41
HLA-DMA-208ENST00000477541 AMER1Q5JTC6 1135 aaPredicted RBP17.6■□□□□ 0.41
HLA-DMA-208ENST00000477541 ZMYM3Q14202 1370 aa17.59■□□□□ 0.41
HLA-DMA-208ENST00000477541 DEPDC5O75140 1603 aa17.59■□□□□ 0.41
HLA-DMA-208ENST00000477541 PTPRTO14522 1441 aa17.58■□□□□ 0.41
HLA-DMA-208ENST00000477541 SLFN5Q08AF3 891 aa17.58■□□□□ 0.41
HLA-DMA-208ENST00000477541 AAMPQ13685 434 aa17.58■□□□□ 0.4
HLA-DMA-208ENST00000477541 ABCC1P33527 1531 aa17.57■□□□□ 0.4
HLA-DMA-208ENST00000477541 RTEL1-TNFRSF6BF6WH68 1400 aa17.57■□□□□ 0.4
HLA-DMA-208ENST00000477541 TET3O43151 1660 aa17.57■□□□□ 0.4
HLA-DMA-208ENST00000477541 NFKBIBQ15653 356 aa17.57■□□□□ 0.4
HLA-DMA-208ENST00000477541 C8orf34Q49A92 452 aa17.57■□□□□ 0.4
HLA-DMA-208ENST00000477541 CERKQ8TCT0 537 aa17.57■□□□□ 0.4
HLA-DMA-208ENST00000477541 PLCH2O75038 1416 aa17.55■□□□□ 0.4
HLA-DMA-208ENST00000477541 E9PSI1 815 aa17.54■□□□□ 0.4
HLA-DMA-208ENST00000477541 C20orf194Q5TEA3 1177 aa17.54■□□□□ 0.4
HLA-DMA-208ENST00000477541 CGNL1Q0VF96 1302 aa17.54■□□□□ 0.4
HLA-DMA-208ENST00000477541 MYO3AQ8NEV4 1616 aa17.53■□□□□ 0.4
HLA-DMA-208ENST00000477541 MYOM2P54296 1465 aa17.53■□□□□ 0.4
HLA-DMA-208ENST00000477541 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
HLA-DMA-208ENST00000477541 PDE3AQ14432 1141 aa17.52■□□□□ 0.4
HLA-DMA-208ENST00000477541 CLTCL1P53675 1640 aa17.51■□□□□ 0.39
HLA-DMA-208ENST00000477541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
HLA-DMA-208ENST00000477541 VWDEQ8N2E2 1590 aa17.51■□□□□ 0.39
HLA-DMA-208ENST00000477541 IL27Q8NEV9 243 aa17.5■□□□□ 0.39
HLA-DMA-208ENST00000477541 SBNO2Q9Y2G9 1366 aa17.49■□□□□ 0.39
HLA-DMA-208ENST00000477541 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
HLA-DMA-208ENST00000477541 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
HLA-DMA-208ENST00000477541 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
HLA-DMA-208ENST00000477541 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
HLA-DMA-208ENST00000477541 IFT172Q9UG01 1749 aa17.46■□□□□ 0.39
HLA-DMA-208ENST00000477541 BECN1Q14457 450 aa17.45■□□□□ 0.38
HLA-DMA-208ENST00000477541 USP32Q8NFA0 1604 aa17.44■□□□□ 0.38
HLA-DMA-208ENST00000477541 HSPA2P54652 639 aa17.44■□□□□ 0.38
HLA-DMA-208ENST00000477541 KANK1Q14678 1352 aa17.44■□□□□ 0.38
HLA-DMA-208ENST00000477541 KIF1BO60333 1816 aa17.43■□□□□ 0.38
HLA-DMA-208ENST00000477541 SETBP1Q9Y6X0 1596 aa17.43■□□□□ 0.38
HLA-DMA-208ENST00000477541 ERVK-7P63135 1459 aa17.42■□□□□ 0.38
HLA-DMA-208ENST00000477541 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
HLA-DMA-208ENST00000477541 ABCA6Q8N139 1617 aa17.42■□□□□ 0.38
HLA-DMA-208ENST00000477541 SPATA31D1Q6ZQQ2 1576 aa17.42■□□□□ 0.38
HLA-DMA-208ENST00000477541 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
HLA-DMA-208ENST00000477541 NEO1Q92859 1461 aa17.42■□□□□ 0.38
HLA-DMA-208ENST00000477541 RIMS1Q86UR5 1692 aaKnown RBP17.41■□□□□ 0.38
HLA-DMA-208ENST00000477541 RAPGEF3O95398 923 aa17.41■□□□□ 0.38
HLA-DMA-208ENST00000477541 NRXN1Q9ULB1 1477 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms